RNA–Protein interactions for RNA: ENST00000543054.5

TSG101-207, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-207ENST00000543054 PBXIP1Q96AQ6 731 aa8.27□□□□□ -1.09
TSG101-207ENST00000543054 UCN2Q96RP3 112 aa8.27□□□□□ -1.09
TSG101-207ENST00000543054 PDZRN3Q9UPQ7 1066 aa8.27□□□□□ -1.09
TSG101-207ENST00000543054 RSPH4AQ5TD94 716 aa8.26□□□□□ -1.09
TSG101-207ENST00000543054 BLOC1S3Q6QNY0 202 aa8.26□□□□□ -1.09
TSG101-207ENST00000543054 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
TSG101-207ENST00000543054 WASHC4Q2M389 1173 aa8.25□□□□□ -1.09
TSG101-207ENST00000543054 ALG2Q9H553 416 aa8.25□□□□□ -1.09
TSG101-207ENST00000543054 C6orf229H3BNL8 230 aa8.24□□□□□ -1.09
TSG101-207ENST00000543054 ACTN4O43707 911 aaKnown RBP8.24□□□□□ -1.09
TSG101-207ENST00000543054 KMT5BQ4FZB7 885 aa8.24□□□□□ -1.09
TSG101-207ENST00000543054 PPP1R12CQ9BZL4 782 aa8.24□□□□□ -1.09
TSG101-207ENST00000543054 ABCC9O60706 1549 aa8.24□□□□□ -1.09
TSG101-207ENST00000543054 RNF223E7ERA6 249 aa8.23□□□□□ -1.09
TSG101-207ENST00000543054 RFX1P22670 979 aa8.23□□□□□ -1.09
TSG101-207ENST00000543054 PRR7Q8TB68 274 aa8.23□□□□□ -1.09
TSG101-207ENST00000543054 NR6A1Q15406 480 aa8.22□□□□□ -1.09
TSG101-207ENST00000543054 ZCCHC6Q5VYS8 1495 aaKnown RBP8.21□□□□□ -1.09
TSG101-207ENST00000543054 CARNS1A5YM72 827 aa8.21□□□□□ -1.1
TSG101-207ENST00000543054 PALM3A6NDB9 673 aaPredicted RBP8.21□□□□□ -1.1
TSG101-207ENST00000543054 TLL1O43897 1013 aa8.21□□□□□ -1.1
TSG101-207ENST00000543054 SLC19A1P41440 591 aa8.21□□□□□ -1.1
TSG101-207ENST00000543054 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.1
TSG101-207ENST00000543054 ATP6V1AP38606 617 aa8.2□□□□□ -1.1
TSG101-207ENST00000543054 TRIM67Q6ZTA4 783 aa8.2□□□□□ -1.1
TSG101-207ENST00000543054 ANKLE1Q8NAG6 615 aa8.2□□□□□ -1.1
TSG101-207ENST00000543054 MORN1Q5T089 497 aa8.19□□□□□ -1.1
TSG101-207ENST00000543054 USTQ9Y2C2 406 aa8.19□□□□□ -1.1
TSG101-207ENST00000543054 ADH1BP00325 375 aa8.18□□□□□ -1.1
TSG101-207ENST00000543054 PUS10Q3MIT2 529 aaKnown RBP8.18□□□□□ -1.1
TSG101-207ENST00000543054 GRIPAP1Q4V328 841 aa8.18□□□□□ -1.1
TSG101-207ENST00000543054 RETREG3Q86VR2 466 aa8.18□□□□□ -1.1
TSG101-207ENST00000543054 GZF1Q9H116 711 aaPredicted RBP8.18□□□□□ -1.1
TSG101-207ENST00000543054 NR1I2O75469 434 aa8.17□□□□□ -1.1
TSG101-207ENST00000543054 S1PR4O95977 384 aa8.17□□□□□ -1.1
TSG101-207ENST00000543054 LMOD1P29536 600 aaPredicted RBP8.17□□□□□ -1.1
TSG101-207ENST00000543054 SPRYD7Q5W111 196 aa8.17□□□□□ -1.1
TSG101-207ENST00000543054 RGS22Q8NE09 1264 aa8.17□□□□□ -1.1
TSG101-207ENST00000543054 TFIP11Q9UBB9 837 aaKnown RBP8.17□□□□□ -1.1
TSG101-207ENST00000543054 SLC27A5Q9Y2P5 690 aa8.17□□□□□ -1.1
TSG101-207ENST00000543054 MAFBQ9Y5Q3 323 aaPredicted RBP8.17□□□□□ -1.1
TSG101-207ENST00000543054 ACIN1Q9UKV3 1341 aaKnown RBP8.17□□□□□ -1.1
TSG101-207ENST00000543054 PRR20EP86478 221 aa8.16□□□□□ -1.1
TSG101-207ENST00000543054 PRR20CP86479 221 aa8.16□□□□□ -1.1
TSG101-207ENST00000543054 PRR20DP86480 221 aa8.16□□□□□ -1.1
TSG101-207ENST00000543054 PRR20BP86481 221 aa8.16□□□□□ -1.1
TSG101-207ENST00000543054 PRR20AP86496 221 aa8.16□□□□□ -1.1
TSG101-207ENST00000543054 RNF19BQ6ZMZ0 732 aa8.16□□□□□ -1.1
TSG101-207ENST00000543054 ZNF598Q86UK7 904 aaKnown RBP8.16□□□□□ -1.1
TSG101-207ENST00000543054 TMEM88BA6NKF7 163 aa8.15□□□□□ -1.1
TSG101-207ENST00000543054 SOX11P35716 441 aa8.15□□□□□ -1.1
TSG101-207ENST00000543054 TMCO4Q5TGY1 634 aa8.15□□□□□ -1.1
TSG101-207ENST00000543054 DESI1Q6ICB0 168 aa8.15□□□□□ -1.1
TSG101-207ENST00000543054 TBC1D9Q6ZT07 1266 aa8.15□□□□□ -1.1
TSG101-207ENST00000543054 ZNF787Q6DD87 383 aa8.14□□□□□ -1.11
TSG101-207ENST00000543054 LIAT1Q6ZQX7 453 aa8.14□□□□□ -1.11
TSG101-207ENST00000543054 PPEF1O14829 653 aaPredicted RBP8.13□□□□□ -1.11
TSG101-207ENST00000543054 DGAT1O75907 488 aa8.13□□□□□ -1.11
TSG101-207ENST00000543054 BRD1O95696 1058 aa8.13□□□□□ -1.11
TSG101-207ENST00000543054 FBXO45P0C2W1 286 aa8.13□□□□□ -1.11
TSG101-207ENST00000543054 CSB-PGBD3P0DP91 1061 aa8.13□□□□□ -1.11
TSG101-207ENST00000543054 MFAP1P55081 439 aaKnown RBP8.13□□□□□ -1.11
TSG101-207ENST00000543054 CDCA8Q53HL2 280 aa8.13□□□□□ -1.11
TSG101-207ENST00000543054 LYPD8Q6UX82 237 aa8.13□□□□□ -1.11
TSG101-207ENST00000543054 PIK3CDO00329 1044 aa8.12□□□□□ -1.11
TSG101-207ENST00000543054 ATG7O95352 703 aa8.12□□□□□ -1.11
TSG101-207ENST00000543054 F12P00748 615 aaPredicted RBP8.12□□□□□ -1.11
TSG101-207ENST00000543054 KCNA1Q09470 495 aa8.12□□□□□ -1.11
TSG101-207ENST00000543054 ZNF697Q5TEC3 545 aa8.12□□□□□ -1.11
TSG101-207ENST00000543054 SLC6A16Q9GZN6 736 aa8.12□□□□□ -1.11
TSG101-207ENST00000543054 MTMR7Q9Y216 660 aa8.12□□□□□ -1.11
TSG101-207ENST00000543054 PDE4CQ08493 712 aa8.11□□□□□ -1.11
TSG101-207ENST00000543054 NR1H3Q13133 447 aa8.11□□□□□ -1.11
TSG101-207ENST00000543054 SEMA3FQ13275 785 aa8.11□□□□□ -1.11
TSG101-207ENST00000543054 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
TSG101-207ENST00000543054 SCUBE3Q8IX30 993 aa8.11□□□□□ -1.11
TSG101-207ENST00000543054 ATP9BO43861 1147 aa8.1□□□□□ -1.11
TSG101-207ENST00000543054 GDF9O60383 454 aa8.1□□□□□ -1.11
TSG101-207ENST00000543054 MYT1Q01538 1121 aa8.1□□□□□ -1.11
TSG101-207ENST00000543054 Q3C1V9 767 aa8.1□□□□□ -1.11
TSG101-207ENST00000543054 MAP10Q9P2G4 905 aa8.1□□□□□ -1.11
TSG101-207ENST00000543054 PLA2G2CQ5R387 149 aa8.09□□□□□ -1.11
TSG101-207ENST00000543054 THAP11Q96EK4 314 aa8.09□□□□□ -1.11
TSG101-207ENST00000543054 ZMIZ1Q9ULJ6 1067 aa8.09□□□□□ -1.11
TSG101-207ENST00000543054 EIF4G2P78344 907 aaKnown RBP eCLIP8.08□□□□□ -1.12
TSG101-207ENST00000543054 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
TSG101-207ENST00000543054 BRICD5Q6PL45 260 aa8.08□□□□□ -1.12
TSG101-207ENST00000543054 SPSB2Q99619 263 aa8.08□□□□□ -1.12
TSG101-207ENST00000543054 USB1Q9BQ65 265 aaKnown RBP8.08□□□□□ -1.12
TSG101-207ENST00000543054 FKBPLQ9UIM3 349 aa8.08□□□□□ -1.12
TSG101-207ENST00000543054 ZBBXA8MT70 800 aa8.07□□□□□ -1.12
TSG101-207ENST00000543054 FOXD4L5Q5VV16 416 aaPredicted RBP8.07□□□□□ -1.12
TSG101-207ENST00000543054 FAM174AQ8TBP5 190 aa8.07□□□□□ -1.12
TSG101-207ENST00000543054 FOXD4L4Q8WXT5 416 aaPredicted RBP8.07□□□□□ -1.12
TSG101-207ENST00000543054 IVNS1ABPQ9Y6Y0 642 aa8.07□□□□□ -1.12
TSG101-207ENST00000543054 PATL2C9JE40 543 aaKnown RBP8.06□□□□□ -1.12
TSG101-207ENST00000543054 TNFRSF10AO00220 468 aa8.06□□□□□ -1.12
TSG101-207ENST00000543054 STK32AQ8WU08 396 aa8.06□□□□□ -1.12
TSG101-207ENST00000543054 ZNF775Q96BV0 537 aaPredicted RBP8.06□□□□□ -1.12
TSG101-207ENST00000543054 SALL2Q9Y467 1007 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms