RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 HSCBQ8IWL3 235 aa16.3■□□□□ 0.2
DDX11-223ENST00000542838 SMC5Q8IY18 1101 aa16.3■□□□□ 0.2
DDX11-223ENST00000542838 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
DDX11-223ENST00000542838 XRCC6P12956 609 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDX11-223ENST00000542838 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
DDX11-223ENST00000542838 ASXL2Q76L83 1435 aa16.29■□□□□ 0.2
DDX11-223ENST00000542838 A0A1W2PP64 1363 aa16.28■□□□□ 0.2
DDX11-223ENST00000542838 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
DDX11-223ENST00000542838 VGFO15240 615 aaPredicted RBP16.28■□□□□ 0.2
DDX11-223ENST00000542838 TRAK2O60296 914 aa16.28■□□□□ 0.2
DDX11-223ENST00000542838 ABCC11Q96J66 1382 aa16.28■□□□□ 0.2
DDX11-223ENST00000542838 IL16Q14005 1332 aa16.27■□□□□ 0.2
DDX11-223ENST00000542838 RIPK4P57078 832 aa16.27■□□□□ 0.2
DDX11-223ENST00000542838 SRPK2P78362 688 aaKnown RBP16.27■□□□□ 0.2
DDX11-223ENST00000542838 ZBTB40Q9NUA8 1239 aa16.27■□□□□ 0.2
DDX11-223ENST00000542838 IPO8O15397 1037 aaKnown RBP16.26■□□□□ 0.19
DDX11-223ENST00000542838 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
DDX11-223ENST00000542838 COL3A1P02461 1466 aaPredicted RBP16.26■□□□□ 0.19
DDX11-223ENST00000542838 CAMSAP1Q5T5Y3 1602 aa16.26■□□□□ 0.19
DDX11-223ENST00000542838 FRMPD1Q5SYB0 1578 aa16.26■□□□□ 0.19
DDX11-223ENST00000542838 HECW2Q9P2P5 1572 aa16.26■□□□□ 0.19
DDX11-223ENST00000542838 PANK2Q9BZ23 570 aa16.25■□□□□ 0.19
DDX11-223ENST00000542838 STK26Q9P289 416 aa16.25■□□□□ 0.19
DDX11-223ENST00000542838 LNPKQ9C0E8 428 aa16.25■□□□□ 0.19
DDX11-223ENST00000542838 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
DDX11-223ENST00000542838 NUCB1Q02818 461 aa16.24■□□□□ 0.19
DDX11-223ENST00000542838 ABCC3O15438 1527 aa16.24■□□□□ 0.19
DDX11-223ENST00000542838 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
DDX11-223ENST00000542838 DDX11L8A8MPP1 907 aa16.24■□□□□ 0.19
DDX11-223ENST00000542838 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
DDX11-223ENST00000542838 FYB1O15117 783 aa16.23■□□□□ 0.19
DDX11-223ENST00000542838 RBM25P49756 843 aaKnown RBP16.23■□□□□ 0.19
DDX11-223ENST00000542838 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
DDX11-223ENST00000542838 SIGLEC1Q9BZZ2 1709 aa16.22■□□□□ 0.19
DDX11-223ENST00000542838 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
DDX11-223ENST00000542838 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
DDX11-223ENST00000542838 TERF2IPQ9NYB0 399 aa16.22■□□□□ 0.19
DDX11-223ENST00000542838 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
DDX11-223ENST00000542838 POGZQ7Z3K3 1410 aa16.21■□□□□ 0.19
DDX11-223ENST00000542838 MRE11P49959 708 aa16.21■□□□□ 0.19
DDX11-223ENST00000542838 SNX21Q969T3 373 aa16.21■□□□□ 0.19
DDX11-223ENST00000542838 MLH3Q9UHC1 1453 aa16.21■□□□□ 0.19
DDX11-223ENST00000542838 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.18
DDX11-223ENST00000542838 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
DDX11-223ENST00000542838 PIK3C2BO00750 1634 aa16.2■□□□□ 0.18
DDX11-223ENST00000542838 MINK1Q8N4C8 1332 aaPredicted RBP16.2■□□□□ 0.18
DDX11-223ENST00000542838 HSP90AB1P08238 724 aaKnown RBP16.2■□□□□ 0.18
DDX11-223ENST00000542838 DDIT3P35638 169 aa16.19■□□□□ 0.18
DDX11-223ENST00000542838 ATAD2Q6PL18 1390 aa16.19■□□□□ 0.18
DDX11-223ENST00000542838 ANKRD45Q5TZF3 282 aa16.18■□□□□ 0.18
DDX11-223ENST00000542838 MED14O60244 1454 aa16.18■□□□□ 0.18
DDX11-223ENST00000542838 TNPO1Q92973 898 aaKnown RBP16.17■□□□□ 0.18
DDX11-223ENST00000542838 GRPEL1Q9HAV7 217 aa16.17■□□□□ 0.18
DDX11-223ENST00000542838 IDI1Q13907 227 aa16.17■□□□□ 0.18
DDX11-223ENST00000542838 BMP2KLQ5H9B9 411 aa16.17■□□□□ 0.18
DDX11-223ENST00000542838 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
DDX11-223ENST00000542838 HDGFL2Q7Z4V5 671 aaPredicted RBP16.17■□□□□ 0.18
DDX11-223ENST00000542838 CIZ1Q9ULV3 898 aaPredicted RBP16.16■□□□□ 0.18
DDX11-223ENST00000542838 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
DDX11-223ENST00000542838 FCHSD2O94868 740 aa16.16■□□□□ 0.18
DDX11-223ENST00000542838 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
DDX11-223ENST00000542838 PNPLA6Q8IY17 1366 aa16.15■□□□□ 0.18
DDX11-223ENST00000542838 NPM1P06748 294 aaKnown RBP eCLIP16.15■□□□□ 0.18
DDX11-223ENST00000542838 PRKAR2BP31323 418 aa16.15■□□□□ 0.18
DDX11-223ENST00000542838 CLCN1P35523 988 aa16.15■□□□□ 0.18
DDX11-223ENST00000542838 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
DDX11-223ENST00000542838 GBP4Q96PP9 640 aa16.15■□□□□ 0.18
DDX11-223ENST00000542838 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
DDX11-223ENST00000542838 ZBTB7BO15156 539 aaPredicted RBP16.15■□□□□ 0.18
DDX11-223ENST00000542838 HSP90AA1P07900 732 aaKnown RBP16.15■□□□□ 0.18
DDX11-223ENST00000542838 UBE2Q2Q8WVN8 375 aa16.15■□□□□ 0.18
DDX11-223ENST00000542838 PPIP5K1Q6PFW1 1433 aa16.15■□□□□ 0.18
DDX11-223ENST00000542838 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
DDX11-223ENST00000542838 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
DDX11-223ENST00000542838 LRRC7Q96NW7 1537 aa16.14■□□□□ 0.17
DDX11-223ENST00000542838 PTPRMP28827 1452 aa16.14■□□□□ 0.17
DDX11-223ENST00000542838 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
DDX11-223ENST00000542838 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
DDX11-223ENST00000542838 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
DDX11-223ENST00000542838 RAB3GAP1Q15042 981 aa16.13■□□□□ 0.17
DDX11-223ENST00000542838 KIF2CQ99661 725 aa16.13■□□□□ 0.17
DDX11-223ENST00000542838 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
DDX11-223ENST00000542838 NAP1L5Q96NT1 182 aaPredicted RBP16.13■□□□□ 0.17
DDX11-223ENST00000542838 MRPL50Q8N5N7 158 aaKnown RBP16.13■□□□□ 0.17
DDX11-223ENST00000542838 MYO5BQ9ULV0 1848 aa16.12■□□□□ 0.17
DDX11-223ENST00000542838 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
DDX11-223ENST00000542838 CLTCQ00610 1675 aaKnown RBP16.12■□□□□ 0.17
DDX11-223ENST00000542838 VAMP4O75379 141 aa16.12■□□□□ 0.17
DDX11-223ENST00000542838 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
DDX11-223ENST00000542838 CABP1Q9NZU7 370 aa16.12■□□□□ 0.17
DDX11-223ENST00000542838 FAM135BQ49AJ0 1406 aa16.12■□□□□ 0.17
DDX11-223ENST00000542838 CD2BP2O95400 341 aaKnown RBP16.11■□□□□ 0.17
DDX11-223ENST00000542838 FBLN1P23142 703 aa16.11■□□□□ 0.17
DDX11-223ENST00000542838 THUMPD2Q9BTF0 503 aaKnown RBP16.11■□□□□ 0.17
DDX11-223ENST00000542838 CDK19Q9BWU1 502 aa16.11■□□□□ 0.17
DDX11-223ENST00000542838 SKOR2Q2VWA4 1001 aaPredicted RBP16.11■□□□□ 0.17
DDX11-223ENST00000542838 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
DDX11-223ENST00000542838 SLC52A1Q9NWF4 448 aa16.11■□□□□ 0.17
DDX11-223ENST00000542838 YTHDC2Q9H6S0 1430 aaKnown RBP16.1■□□□□ 0.17
DDX11-223ENST00000542838 K7ELQ4 463 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms