RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 PMFBP1Q8TBY8 1022 aa14.7□□□□□ -0.06
SCG3-202ENST00000542355 EDC4Q6P2E9 1401 aaKnown RBP14.69□□□□□ -0.06
SCG3-202ENST00000542355 NME9Q86XW9 330 aa14.68□□□□□ -0.06
SCG3-202ENST00000542355 CDC42BPGQ6DT37 1551 aa14.67□□□□□ -0.06
SCG3-202ENST00000542355 C14orf37Q86TY3 774 aa14.67□□□□□ -0.06
SCG3-202ENST00000542355 CFAP53Q96M91 514 aa14.67□□□□□ -0.06
SCG3-202ENST00000542355 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
SCG3-202ENST00000542355 INSRP06213 1382 aa14.67□□□□□ -0.06
SCG3-202ENST00000542355 NGDNQ8NEJ9 315 aaKnown RBP14.67□□□□□ -0.06
SCG3-202ENST00000542355 CHD2O14647 1828 aaKnown RBP14.67□□□□□ -0.06
SCG3-202ENST00000542355 FBLN1P23142 703 aa14.66□□□□□ -0.06
SCG3-202ENST00000542355 PROSER2Q86WR7 435 aaPredicted RBP14.66□□□□□ -0.06
SCG3-202ENST00000542355 BLMP54132 1417 aaPredicted RBP14.65□□□□□ -0.06
SCG3-202ENST00000542355 TTC21BQ7Z4L5 1316 aa14.64□□□□□ -0.07
SCG3-202ENST00000542355 CCDC146Q8IYE0 955 aa14.64□□□□□ -0.07
SCG3-202ENST00000542355 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
SCG3-202ENST00000542355 COG3Q96JB2 828 aa14.64□□□□□ -0.07
SCG3-202ENST00000542355 NKTRP30414 1462 aaKnown RBP14.64□□□□□ -0.07
SCG3-202ENST00000542355 ANKARQ7Z5J8 1434 aa14.63□□□□□ -0.07
SCG3-202ENST00000542355 PPM1GO15355 546 aaPredicted RBP14.63□□□□□ -0.07
SCG3-202ENST00000542355 USP6P35125 1406 aa14.62□□□□□ -0.07
SCG3-202ENST00000542355 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
SCG3-202ENST00000542355 POLKQ9UBT6 870 aa14.61□□□□□ -0.07
SCG3-202ENST00000542355 ADGRL3Q9HAR2 1447 aa14.61□□□□□ -0.07
SCG3-202ENST00000542355 LMTK3Q96Q04 1460 aa14.61□□□□□ -0.07
SCG3-202ENST00000542355 SUPT16HQ9Y5B9 1047 aaKnown RBP14.61□□□□□ -0.07
SCG3-202ENST00000542355 TOPAZ1Q8N9V7 1692 aa14.6□□□□□ -0.07
SCG3-202ENST00000542355 APAF1O14727 1248 aa14.6□□□□□ -0.07
SCG3-202ENST00000542355 ESCO1Q5FWF5 840 aa14.6□□□□□ -0.07
SCG3-202ENST00000542355 PHF8Q9UPP1 1060 aa14.6□□□□□ -0.07
SCG3-202ENST00000542355 U2AF1L5P0DN76 240 aaPredicted RBP14.59□□□□□ -0.07
SCG3-202ENST00000542355 U2AF1Q01081 240 aaKnown RBP eCLIP14.59□□□□□ -0.07
SCG3-202ENST00000542355 NUDCQ9Y266 331 aa14.59□□□□□ -0.07
SCG3-202ENST00000542355 SSH2Q76I76 1423 aa14.59□□□□□ -0.07
SCG3-202ENST00000542355 EMILIN1Q9Y6C2 1016 aa14.58□□□□□ -0.07
SCG3-202ENST00000542355 MON2Q7Z3U7 1717 aa14.58□□□□□ -0.07
SCG3-202ENST00000542355 AKAP12Q02952 1782 aa14.58□□□□□ -0.08
SCG3-202ENST00000542355 ITSN1Q15811 1721 aa14.58□□□□□ -0.08
SCG3-202ENST00000542355 KIF20BQ96Q89 1820 aa14.58□□□□□ -0.08
SCG3-202ENST00000542355 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.08
SCG3-202ENST00000542355 PDE3BQ13370 1112 aa14.58□□□□□ -0.08
SCG3-202ENST00000542355 RRS1Q15050 365 aaKnown RBP14.58□□□□□ -0.08
SCG3-202ENST00000542355 C19orf44Q9H6X5 657 aa14.58□□□□□ -0.08
SCG3-202ENST00000542355 NWD1Q149M9 1564 aa14.58□□□□□ -0.08
SCG3-202ENST00000542355 TTC21AQ8NDW8 1320 aa14.58□□□□□ -0.08
SCG3-202ENST00000542355 SMG6Q86US8 1419 aaKnown RBP14.58□□□□□ -0.08
SCG3-202ENST00000542355 NALCNQ8IZF0 1738 aa14.58□□□□□ -0.08
SCG3-202ENST00000542355 DIAPH1O60610 1272 aaKnown RBP14.57□□□□□ -0.08
SCG3-202ENST00000542355 ANKRD26Q9UPS8 1709 aa14.57□□□□□ -0.08
SCG3-202ENST00000542355 PNPLA6Q8IY17 1366 aa14.57□□□□□ -0.08
SCG3-202ENST00000542355 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
SCG3-202ENST00000542355 FMN2Q9NZ56 1722 aa14.56□□□□□ -0.08
SCG3-202ENST00000542355 AATKQ6ZMQ8 1374 aa14.56□□□□□ -0.08
SCG3-202ENST00000542355 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
SCG3-202ENST00000542355 RGPD8O14715 1765 aaPredicted RBP14.56□□□□□ -0.08
SCG3-202ENST00000542355 RUNDC1Q96C34 613 aa14.56□□□□□ -0.08
SCG3-202ENST00000542355 ORAI2Q96SN7 254 aa14.56□□□□□ -0.08
SCG3-202ENST00000542355 TMEM94Q12767 1356 aa14.55□□□□□ -0.08
SCG3-202ENST00000542355 SOX12O15370 315 aa14.55□□□□□ -0.08
SCG3-202ENST00000542355 NEFLP07196 543 aa14.54□□□□□ -0.08
SCG3-202ENST00000542355 PSME1Q06323 249 aa14.54□□□□□ -0.08
SCG3-202ENST00000542355 NLRP6P59044 892 aa14.54□□□□□ -0.08
SCG3-202ENST00000542355 SHPRHQ149N8 1683 aa14.54□□□□□ -0.08
SCG3-202ENST00000542355 OVOS2A0A0J9YW53 1432 aa14.53□□□□□ -0.08
SCG3-202ENST00000542355 OVOS2Q6IE36 1432 aa14.53□□□□□ -0.08
SCG3-202ENST00000542355 COL3A1P02461 1466 aaPredicted RBP14.53□□□□□ -0.08
SCG3-202ENST00000542355 ATF3P18847 181 aa14.53□□□□□ -0.08
SCG3-202ENST00000542355 NUTM2GQ5VZR2 741 aa14.53□□□□□ -0.08
SCG3-202ENST00000542355 ABTB2Q8N961 1025 aa14.53□□□□□ -0.08
SCG3-202ENST00000542355 NRKQ7Z2Y5 1582 aa14.53□□□□□ -0.08
SCG3-202ENST00000542355 FOXO3O43524 673 aa14.53□□□□□ -0.08
SCG3-202ENST00000542355 NEUROD2Q15784 382 aa14.53□□□□□ -0.08
SCG3-202ENST00000542355 TCP11L2Q8N4U5 519 aa14.53□□□□□ -0.08
SCG3-202ENST00000542355 ZNF521Q96K83 1311 aa14.52□□□□□ -0.09
SCG3-202ENST00000542355 RRP7AQ9Y3A4 280 aaKnown RBP14.51□□□□□ -0.09
SCG3-202ENST00000542355 USP31Q70CQ4 1352 aa14.51□□□□□ -0.09
SCG3-202ENST00000542355 GOLGA2Q08379 1002 aa14.51□□□□□ -0.09
SCG3-202ENST00000542355 IL13P35225 146 aa14.5□□□□□ -0.09
SCG3-202ENST00000542355 NGEFQ8N5V2 710 aa14.5□□□□□ -0.09
SCG3-202ENST00000542355 PLEKHF1Q96S99 279 aa14.5□□□□□ -0.09
SCG3-202ENST00000542355 XPCQ01831 940 aaPredicted RBP14.5□□□□□ -0.09
SCG3-202ENST00000542355 NCOA3Q9Y6Q9 1424 aa14.49□□□□□ -0.09
SCG3-202ENST00000542355 ZNF335Q9H4Z2 1342 aaPredicted RBP14.49□□□□□ -0.09
SCG3-202ENST00000542355 IRX6P78412 446 aaPredicted RBP14.49□□□□□ -0.09
SCG3-202ENST00000542355 STRCQ7RTU9 1775 aa14.49□□□□□ -0.09
SCG3-202ENST00000542355 C1orf167Q5SNV9 1468 aa14.49□□□□□ -0.09
SCG3-202ENST00000542355 CADPS2Q86UW7 1296 aa14.49□□□□□ -0.09
SCG3-202ENST00000542355 WWC1Q8IX03 1113 aa14.49□□□□□ -0.09
SCG3-202ENST00000542355 STRCP1A6NGW2 1772 aa14.48□□□□□ -0.09
SCG3-202ENST00000542355 FCHSD2O94868 740 aa14.48□□□□□ -0.09
SCG3-202ENST00000542355 PNNQ9H307 717 aaKnown RBP14.48□□□□□ -0.09
SCG3-202ENST00000542355 CDK12Q9NYV4 1490 aaPredicted RBP14.48□□□□□ -0.09
SCG3-202ENST00000542355 HMOX1P09601 288 aa14.47□□□□□ -0.09
SCG3-202ENST00000542355 HSP90AB2PQ58FF8 381 aa14.47□□□□□ -0.09
SCG3-202ENST00000542355 MAP2P11137 1827 aaKnown RBP14.47□□□□□ -0.09
SCG3-202ENST00000542355 MAP3K19Q56UN5 1328 aa14.47□□□□□ -0.09
SCG3-202ENST00000542355 MAPK8IP3Q9UPT6 1336 aa14.47□□□□□ -0.09
SCG3-202ENST00000542355 MSH6P52701 1360 aa14.46□□□□□ -0.09
SCG3-202ENST00000542355 SLFN5Q08AF3 891 aa14.46□□□□□ -0.09
SCG3-202ENST00000542355 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms