RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 PRR36Q9H6K5 1346 aa12.8□□□□□ -0.36
NPIPB4-216ENST00000542338 NUTM2FA1L443 756 aa12.79□□□□□ -0.36
NPIPB4-216ENST00000542338 ZNF772Q68DY9 489 aaPredicted RBP12.79□□□□□ -0.36
NPIPB4-216ENST00000542338 NGDNQ8NEJ9 315 aaKnown RBP12.79□□□□□ -0.36
NPIPB4-216ENST00000542338 LRRC59Q96AG4 307 aaKnown RBP12.79□□□□□ -0.36
NPIPB4-216ENST00000542338 BRD4O60885 1362 aaPredicted RBP12.79□□□□□ -0.36
NPIPB4-216ENST00000542338 MYOM1P52179 1685 aa12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 ESCO1Q5FWF5 840 aa12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 PRKRIP1Q9H875 184 aaPredicted RBP12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 FMN2Q9NZ56 1722 aa12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 ACEP12821 1306 aa12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 A0A1W2PP64 1363 aa12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 NSD2O96028 1365 aa12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
NPIPB4-216ENST00000542338 KIF1AQ12756 1690 aa12.77□□□□□ -0.36
NPIPB4-216ENST00000542338 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.37
NPIPB4-216ENST00000542338 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.37
NPIPB4-216ENST00000542338 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.37
NPIPB4-216ENST00000542338 AMER1Q5JTC6 1135 aaPredicted RBP12.76□□□□□ -0.37
NPIPB4-216ENST00000542338 MIER1Q8N108 512 aa12.76□□□□□ -0.37
NPIPB4-216ENST00000542338 NPHP3Q7Z494 1330 aa12.76□□□□□ -0.37
NPIPB4-216ENST00000542338 POLR3AO14802 1390 aaPredicted RBP12.76□□□□□ -0.37
NPIPB4-216ENST00000542338 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
NPIPB4-216ENST00000542338 ITSN1Q15811 1721 aa12.76□□□□□ -0.37
NPIPB4-216ENST00000542338 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
NPIPB4-216ENST00000542338 EDC4Q6P2E9 1401 aaKnown RBP12.75□□□□□ -0.37
NPIPB4-216ENST00000542338 PMFBP1Q8TBY8 1022 aa12.75□□□□□ -0.37
NPIPB4-216ENST00000542338 CD163L1Q9NR16 1453 aa12.74□□□□□ -0.37
NPIPB4-216ENST00000542338 TTC21AQ8NDW8 1320 aa12.74□□□□□ -0.37
NPIPB4-216ENST00000542338 PSME1Q06323 249 aa12.74□□□□□ -0.37
NPIPB4-216ENST00000542338 ORAI2Q96SN7 254 aa12.74□□□□□ -0.37
NPIPB4-216ENST00000542338 TOPAZ1Q8N9V7 1692 aa12.73□□□□□ -0.37
NPIPB4-216ENST00000542338 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
NPIPB4-216ENST00000542338 SOS2Q07890 1332 aaPredicted RBP12.73□□□□□ -0.37
NPIPB4-216ENST00000542338 CC2D1BQ5T0F9 858 aaKnown RBP12.73□□□□□ -0.37
NPIPB4-216ENST00000542338 USP32Q8NFA0 1604 aa12.73□□□□□ -0.37
NPIPB4-216ENST00000542338 MORC1Q86VD1 984 aa12.72□□□□□ -0.37
NPIPB4-216ENST00000542338 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
NPIPB4-216ENST00000542338 USP6P35125 1406 aa12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 AFF2P51816 1311 aa12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 TTC21BQ7Z4L5 1316 aa12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 MYBBP1AQ9BQG0 1328 aaKnown RBP12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 COL22A1Q8NFW1 1626 aaPredicted RBP12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 FYB1O15117 783 aa12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 RXRBP28702 533 aa12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 DDX17Q92841 729 aaKnown RBP12.71□□□□□ -0.37
NPIPB4-216ENST00000542338 PXDNQ92626 1479 aa12.71□□□□□ -0.38
NPIPB4-216ENST00000542338 FOXO3O43524 673 aa12.69□□□□□ -0.38
NPIPB4-216ENST00000542338 CNGB1Q14028 1251 aaPredicted RBP12.69□□□□□ -0.38
NPIPB4-216ENST00000542338 NLRP13Q86W25 1043 aa12.69□□□□□ -0.38
NPIPB4-216ENST00000542338 COG3Q96JB2 828 aa12.69□□□□□ -0.38
NPIPB4-216ENST00000542338 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
NPIPB4-216ENST00000542338 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
NPIPB4-216ENST00000542338 SSH2Q76I76 1423 aa12.68□□□□□ -0.38
NPIPB4-216ENST00000542338 AKAP12Q02952 1782 aa12.68□□□□□ -0.38
NPIPB4-216ENST00000542338 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
NPIPB4-216ENST00000542338 MON2Q7Z3U7 1717 aa12.67□□□□□ -0.38
NPIPB4-216ENST00000542338 RGS12O14924 1447 aa12.66□□□□□ -0.38
NPIPB4-216ENST00000542338 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
NPIPB4-216ENST00000542338 ABTB2Q8N961 1025 aa12.66□□□□□ -0.38
NPIPB4-216ENST00000542338 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPIPB4-216ENST00000542338 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
NPIPB4-216ENST00000542338 USP31Q70CQ4 1352 aa12.66□□□□□ -0.38
NPIPB4-216ENST00000542338 RGPD8O14715 1765 aaPredicted RBP12.66□□□□□ -0.38
NPIPB4-216ENST00000542338 TNS3Q68CZ2 1445 aa12.65□□□□□ -0.38
NPIPB4-216ENST00000542338 PPP2R1AP30153 589 aa12.65□□□□□ -0.38
NPIPB4-216ENST00000542338 NME9Q86XW9 330 aa12.65□□□□□ -0.38
NPIPB4-216ENST00000542338 SBNO1A3KN83 1393 aa12.65□□□□□ -0.38
NPIPB4-216ENST00000542338 NLRP6P59044 892 aa12.64□□□□□ -0.39
NPIPB4-216ENST00000542338 RBM6P78332 1123 aaKnown RBP12.64□□□□□ -0.39
NPIPB4-216ENST00000542338 NGLY1Q96IV0 654 aa12.64□□□□□ -0.39
NPIPB4-216ENST00000542338 CFAP53Q96M91 514 aa12.64□□□□□ -0.39
NPIPB4-216ENST00000542338 MRS2Q9HD23 443 aa12.64□□□□□ -0.39
NPIPB4-216ENST00000542338 MARF1Q9Y4F3 1742 aaKnown RBP12.64□□□□□ -0.39
NPIPB4-216ENST00000542338 KCNH5Q8NCM2 988 aa12.63□□□□□ -0.39
NPIPB4-216ENST00000542338 QTRT2Q9H974 415 aaKnown RBP12.63□□□□□ -0.39
NPIPB4-216ENST00000542338 ARHGEF10O15013 1369 aa12.63□□□□□ -0.39
NPIPB4-216ENST00000542338 AATKQ6ZMQ8 1374 aa12.63□□□□□ -0.39
NPIPB4-216ENST00000542338 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
NPIPB4-216ENST00000542338 XPCQ01831 940 aaPredicted RBP12.62□□□□□ -0.39
NPIPB4-216ENST00000542338 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
NPIPB4-216ENST00000542338 TNNT2P45379 298 aaPredicted RBP12.61□□□□□ -0.39
NPIPB4-216ENST00000542338 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
NPIPB4-216ENST00000542338 MTHFSP49914 203 aa12.6□□□□□ -0.39
NPIPB4-216ENST00000542338 HAP1P54257 671 aaPredicted RBP12.6□□□□□ -0.39
NPIPB4-216ENST00000542338 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
NPIPB4-216ENST00000542338 USP21Q9UK80 565 aa12.6□□□□□ -0.39
NPIPB4-216ENST00000542338 OVOS2A0A0J9YW53 1432 aa12.6□□□□□ -0.39
NPIPB4-216ENST00000542338 OVOS2Q6IE36 1432 aa12.6□□□□□ -0.39
NPIPB4-216ENST00000542338 ANKRD26Q9UPS8 1709 aa12.59□□□□□ -0.39
NPIPB4-216ENST00000542338 ABCA3Q99758 1704 aa12.58□□□□□ -0.4
NPIPB4-216ENST00000542338 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.58□□□□□ -0.4
NPIPB4-216ENST00000542338 TRPM3Q9HCF6 1732 aaPredicted RBP12.58□□□□□ -0.4
NPIPB4-216ENST00000542338 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
NPIPB4-216ENST00000542338 TRPC5Q9UL62 973 aaPredicted RBP12.58□□□□□ -0.4
NPIPB4-216ENST00000542338 NUDCQ9Y266 331 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms