RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 POLKQ9UBT6 870 aa22.76■■□□□ 1.23
TMEM50B-210ENST00000542230 CDC42BPGQ6DT37 1551 aa22.75■■□□□ 1.23
TMEM50B-210ENST00000542230 EDC4Q6P2E9 1401 aaKnown RBP22.75■■□□□ 1.23
TMEM50B-210ENST00000542230 RUNDC1Q96C34 613 aa22.75■■□□□ 1.23
TMEM50B-210ENST00000542230 COL3A1P02461 1466 aaPredicted RBP22.75■■□□□ 1.23
TMEM50B-210ENST00000542230 ACEP12821 1306 aa22.75■■□□□ 1.23
TMEM50B-210ENST00000542230 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
TMEM50B-210ENST00000542230 ANKLE2Q86XL3 938 aa22.74■■□□□ 1.23
TMEM50B-210ENST00000542230 PMFBP1Q8TBY8 1022 aa22.74■■□□□ 1.23
TMEM50B-210ENST00000542230 EMILIN1Q9Y6C2 1016 aa22.74■■□□□ 1.23
TMEM50B-210ENST00000542230 NKTRP30414 1462 aaKnown RBP22.74■■□□□ 1.23
TMEM50B-210ENST00000542230 WWC1Q8IX03 1113 aa22.74■■□□□ 1.23
TMEM50B-210ENST00000542230 ADGRB2O60241 1585 aa22.73■■□□□ 1.23
TMEM50B-210ENST00000542230 PTCH1Q13635 1447 aa22.71■■□□□ 1.23
TMEM50B-210ENST00000542230 TRMT2AQ8IZ69 625 aaKnown RBP22.71■■□□□ 1.23
TMEM50B-210ENST00000542230 RRS1Q15050 365 aaKnown RBP22.7■■□□□ 1.22
TMEM50B-210ENST00000542230 SETD1BQ9UPS6 1966 aaKnown RBP22.69■■□□□ 1.22
TMEM50B-210ENST00000542230 IQSEC2Q5JU85 1478 aa22.69■■□□□ 1.22
TMEM50B-210ENST00000542230 PNPLA6Q8IY17 1366 aa22.69■■□□□ 1.22
TMEM50B-210ENST00000542230 MON2Q7Z3U7 1717 aa22.69■■□□□ 1.22
TMEM50B-210ENST00000542230 XRN1Q8IZH2 1706 aaKnown RBP22.69■■□□□ 1.22
TMEM50B-210ENST00000542230 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
TMEM50B-210ENST00000542230 EXOC6Q8TAG9 804 aa22.69■■□□□ 1.22
TMEM50B-210ENST00000542230 TSHZ2Q9NRE2 1034 aa22.68■■□□□ 1.22
TMEM50B-210ENST00000542230 DIP2AQ14689 1571 aa22.68■■□□□ 1.22
TMEM50B-210ENST00000542230 AKAP12Q02952 1782 aa22.68■■□□□ 1.22
TMEM50B-210ENST00000542230 DIAPH1O60610 1272 aaKnown RBP22.68■■□□□ 1.22
TMEM50B-210ENST00000542230 ZNF692Q9BU19 519 aaPredicted RBP22.68■■□□□ 1.22
TMEM50B-210ENST00000542230 MAP2P11137 1827 aaKnown RBP22.68■■□□□ 1.22
TMEM50B-210ENST00000542230 TTC21BQ7Z4L5 1316 aa22.67■■□□□ 1.22
TMEM50B-210ENST00000542230 PLEKHF1Q96S99 279 aa22.67■■□□□ 1.22
TMEM50B-210ENST00000542230 RGPD8O14715 1765 aaPredicted RBP22.67■■□□□ 1.22
TMEM50B-210ENST00000542230 COG3Q96JB2 828 aa22.67■■□□□ 1.22
TMEM50B-210ENST00000542230 PELP1Q8IZL8 1130 aaKnown RBP22.66■■□□□ 1.22
TMEM50B-210ENST00000542230 ZNF142P52746 1687 aaPredicted RBP22.66■■□□□ 1.22
TMEM50B-210ENST00000542230 TOPAZ1Q8N9V7 1692 aa22.66■■□□□ 1.22
TMEM50B-210ENST00000542230 ITSN1Q15811 1721 aa22.66■■□□□ 1.22
TMEM50B-210ENST00000542230 C20orf194Q5TEA3 1177 aa22.65■■□□□ 1.22
TMEM50B-210ENST00000542230 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
TMEM50B-210ENST00000542230 E9PSI1 815 aa22.63■■□□□ 1.21
TMEM50B-210ENST00000542230 SOX12O15370 315 aa22.63■■□□□ 1.21
TMEM50B-210ENST00000542230 USP6P35125 1406 aa22.63■■□□□ 1.21
TMEM50B-210ENST00000542230 HMOX1P09601 288 aa22.61■■□□□ 1.21
TMEM50B-210ENST00000542230 NGDNQ8NEJ9 315 aaKnown RBP22.61■■□□□ 1.21
TMEM50B-210ENST00000542230 PIK3R4Q99570 1358 aa22.6■■□□□ 1.21
TMEM50B-210ENST00000542230 BCAR3O75815 825 aa22.6■■□□□ 1.21
TMEM50B-210ENST00000542230 NGEFQ8N5V2 710 aa22.59■■□□□ 1.21
TMEM50B-210ENST00000542230 NRKQ7Z2Y5 1582 aa22.59■■□□□ 1.21
TMEM50B-210ENST00000542230 TMPOP42166 694 aaKnown RBP22.58■■□□□ 1.21
TMEM50B-210ENST00000542230 CCDC136Q96JN2 1154 aa22.58■■□□□ 1.21
TMEM50B-210ENST00000542230 CHD2O14647 1828 aaKnown RBP22.58■■□□□ 1.21
TMEM50B-210ENST00000542230 SSH2Q76I76 1423 aa22.58■■□□□ 1.2
TMEM50B-210ENST00000542230 IL13P35225 146 aa22.57■■□□□ 1.2
TMEM50B-210ENST00000542230 TRIM35Q9UPQ4 493 aa22.57■■□□□ 1.2
TMEM50B-210ENST00000542230 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
TMEM50B-210ENST00000542230 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
TMEM50B-210ENST00000542230 AATKQ6ZMQ8 1374 aa22.57■■□□□ 1.2
TMEM50B-210ENST00000542230 PHACTR3Q96KR7 559 aa22.56■■□□□ 1.2
TMEM50B-210ENST00000542230 PRKAR2BP31323 418 aa22.56■■□□□ 1.2
TMEM50B-210ENST00000542230 RSPH6AQ9H0K4 717 aa22.56■■□□□ 1.2
TMEM50B-210ENST00000542230 NUTM2GQ5VZR2 741 aa22.55■■□□□ 1.2
TMEM50B-210ENST00000542230 CCDC27Q2M243 656 aa22.55■■□□□ 1.2
TMEM50B-210ENST00000542230 OVOS2A0A0J9YW53 1432 aa22.55■■□□□ 1.2
TMEM50B-210ENST00000542230 OVOS2Q6IE36 1432 aa22.55■■□□□ 1.2
TMEM50B-210ENST00000542230 MAPK8IP3Q9UPT6 1336 aa22.54■■□□□ 1.2
TMEM50B-210ENST00000542230 WDR63Q8IWG1 891 aa22.54■■□□□ 1.2
TMEM50B-210ENST00000542230 LRRC7Q96NW7 1537 aa22.53■■□□□ 1.2
TMEM50B-210ENST00000542230 NALCNQ8IZF0 1738 aa22.53■■□□□ 1.2
TMEM50B-210ENST00000542230 RIPK4P57078 832 aa22.53■■□□□ 1.2
TMEM50B-210ENST00000542230 TSR2Q969E8 191 aaKnown RBP22.53■■□□□ 1.2
TMEM50B-210ENST00000542230 FCHSD2O94868 740 aa22.52■■□□□ 1.2
TMEM50B-210ENST00000542230 CDK12Q9NYV4 1490 aaPredicted RBP22.52■■□□□ 1.19
TMEM50B-210ENST00000542230 HSP90AB2PQ58FF8 381 aa22.51■■□□□ 1.19
TMEM50B-210ENST00000542230 FMN2Q9NZ56 1722 aa22.49■■□□□ 1.19
TMEM50B-210ENST00000542230 EIF4A2Q14240 407 aaKnown RBP22.48■■□□□ 1.19
TMEM50B-210ENST00000542230 AEBP1Q8IUX7 1158 aa22.48■■□□□ 1.19
TMEM50B-210ENST00000542230 C14orf37Q86TY3 774 aa22.48■■□□□ 1.19
TMEM50B-210ENST00000542230 ANKARQ7Z5J8 1434 aa22.47■■□□□ 1.19
TMEM50B-210ENST00000542230 HSPA2P54652 639 aa22.47■■□□□ 1.19
TMEM50B-210ENST00000542230 BCL2L13Q9BXK5 485 aa22.47■■□□□ 1.19
TMEM50B-210ENST00000542230 PAK3O75914 559 aaPredicted RBP22.47■■□□□ 1.19
TMEM50B-210ENST00000542230 THUMPD2Q9BTF0 503 aaKnown RBP22.47■■□□□ 1.19
TMEM50B-210ENST00000542230 PEAK1Q9H792 1746 aa22.46■■□□□ 1.19
TMEM50B-210ENST00000542230 NLRP6P59044 892 aa22.46■■□□□ 1.19
TMEM50B-210ENST00000542230 USP31Q70CQ4 1352 aa22.46■■□□□ 1.19
TMEM50B-210ENST00000542230 PHF8Q9UPP1 1060 aa22.46■■□□□ 1.19
TMEM50B-210ENST00000542230 MAP3K19Q56UN5 1328 aa22.46■■□□□ 1.19
TMEM50B-210ENST00000542230 TTC21AQ8NDW8 1320 aa22.46■■□□□ 1.19
TMEM50B-210ENST00000542230 PIK3C2AO00443 1686 aa22.45■■□□□ 1.18
TMEM50B-210ENST00000542230 FANCIQ9NVI1 1328 aa22.45■■□□□ 1.18
TMEM50B-210ENST00000542230 ESCO1Q5FWF5 840 aa22.45■■□□□ 1.18
TMEM50B-210ENST00000542230 RARSP54136 660 aaKnown RBP22.43■■□□□ 1.18
TMEM50B-210ENST00000542230 ADGRL3Q9HAR2 1447 aa22.43■■□□□ 1.18
TMEM50B-210ENST00000542230 NCBP3Q53F19 620 aaKnown RBP22.43■■□□□ 1.18
TMEM50B-210ENST00000542230 ORAI2Q96SN7 254 aa22.43■■□□□ 1.18
TMEM50B-210ENST00000542230 TNNQ9UQP3 1299 aa22.42■■□□□ 1.18
TMEM50B-210ENST00000542230 SULT6B1Q6IMI4 303 aa22.42■■□□□ 1.18
TMEM50B-210ENST00000542230 ABTB2Q8N961 1025 aa22.42■■□□□ 1.18
TMEM50B-210ENST00000542230 MYH16Q9H6N6 1097 aa22.42■■□□□ 1.18
TMEM50B-210ENST00000542230 XPCQ01831 940 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms