RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 GSE1Q14687 1217 aa12.8□□□□□ -0.36
CX3CR1-206ENST00000542107 PRKAR2BP31323 418 aa12.79□□□□□ -0.36
CX3CR1-206ENST00000542107 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
CX3CR1-206ENST00000542107 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
CX3CR1-206ENST00000542107 SHPRHQ149N8 1683 aa12.78□□□□□ -0.36
CX3CR1-206ENST00000542107 NSD2O96028 1365 aa12.78□□□□□ -0.36
CX3CR1-206ENST00000542107 TMEM57Q8N5G2 664 aa12.78□□□□□ -0.36
CX3CR1-206ENST00000542107 ABCC11Q96J66 1382 aa12.78□□□□□ -0.36
CX3CR1-206ENST00000542107 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
CX3CR1-206ENST00000542107 NEXMIFQ5QGS0 1516 aa12.78□□□□□ -0.36
CX3CR1-206ENST00000542107 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.36
CX3CR1-206ENST00000542107 BECN1Q14457 450 aa12.77□□□□□ -0.36
CX3CR1-206ENST00000542107 ATF7IPQ6VMQ6 1270 aa12.77□□□□□ -0.36
CX3CR1-206ENST00000542107 SIGLEC1Q9BZZ2 1709 aa12.77□□□□□ -0.36
CX3CR1-206ENST00000542107 ATAD2Q6PL18 1390 aa12.77□□□□□ -0.37
CX3CR1-206ENST00000542107 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
CX3CR1-206ENST00000542107 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
CX3CR1-206ENST00000542107 EMILIN1Q9Y6C2 1016 aa12.76□□□□□ -0.37
CX3CR1-206ENST00000542107 CAMSAP1Q5T5Y3 1602 aa12.76□□□□□ -0.37
CX3CR1-206ENST00000542107 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
CX3CR1-206ENST00000542107 TXNDC2Q86VQ3 553 aa12.75□□□□□ -0.37
CX3CR1-206ENST00000542107 PHACTR3Q96KR7 559 aa12.75□□□□□ -0.37
CX3CR1-206ENST00000542107 BRPF3Q9ULD4 1205 aa12.75□□□□□ -0.37
CX3CR1-206ENST00000542107 DDX19BQ9UMR2 479 aa12.75□□□□□ -0.37
CX3CR1-206ENST00000542107 POLKQ9UBT6 870 aa12.75□□□□□ -0.37
CX3CR1-206ENST00000542107 NEO1Q92859 1461 aa12.74□□□□□ -0.37
CX3CR1-206ENST00000542107 NME9Q86XW9 330 aa12.74□□□□□ -0.37
CX3CR1-206ENST00000542107 ARXQ96QS3 562 aa12.74□□□□□ -0.37
CX3CR1-206ENST00000542107 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
CX3CR1-206ENST00000542107 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
CX3CR1-206ENST00000542107 LNPKQ9C0E8 428 aa12.74□□□□□ -0.37
CX3CR1-206ENST00000542107 DIP2CQ9Y2E4 1556 aa12.74□□□□□ -0.37
CX3CR1-206ENST00000542107 AAMPQ13685 434 aa12.73□□□□□ -0.37
CX3CR1-206ENST00000542107 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
CX3CR1-206ENST00000542107 SOX12O15370 315 aa12.73□□□□□ -0.37
CX3CR1-206ENST00000542107 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
CX3CR1-206ENST00000542107 PNNQ9H307 717 aaKnown RBP12.73□□□□□ -0.37
CX3CR1-206ENST00000542107 PIK3C2BO00750 1634 aa12.72□□□□□ -0.37
CX3CR1-206ENST00000542107 ARHGEF28Q8N1W1 1705 aaKnown RBP12.72□□□□□ -0.37
CX3CR1-206ENST00000542107 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
CX3CR1-206ENST00000542107 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
CX3CR1-206ENST00000542107 FCHSD2O94868 740 aa12.72□□□□□ -0.37
CX3CR1-206ENST00000542107 ESF1Q9H501 851 aaKnown RBP12.72□□□□□ -0.37
CX3CR1-206ENST00000542107 TSPYL6Q8N831 410 aa12.71□□□□□ -0.37
CX3CR1-206ENST00000542107 TBC1D32Q96NH3 1257 aa12.71□□□□□ -0.37
CX3CR1-206ENST00000542107 TBC1D2Q9BYX2 928 aa12.71□□□□□ -0.37
CX3CR1-206ENST00000542107 CT47B1P0C2W7 299 aaPredicted RBP12.71□□□□□ -0.37
CX3CR1-206ENST00000542107 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
CX3CR1-206ENST00000542107 ARHGAP31Q2M1Z3 1444 aa12.71□□□□□ -0.37
CX3CR1-206ENST00000542107 PTPRMP28827 1452 aa12.71□□□□□ -0.37
CX3CR1-206ENST00000542107 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.38
CX3CR1-206ENST00000542107 FAM83GA6ND36 823 aa12.7□□□□□ -0.38
CX3CR1-206ENST00000542107 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
CX3CR1-206ENST00000542107 CD163L1Q9NR16 1453 aa12.69□□□□□ -0.38
CX3CR1-206ENST00000542107 ZBTB40Q9NUA8 1239 aa12.69□□□□□ -0.38
CX3CR1-206ENST00000542107 KIF16BQ96L93 1317 aa12.69□□□□□ -0.38
CX3CR1-206ENST00000542107 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
CX3CR1-206ENST00000542107 ZFYVE9O95405 1425 aa12.68□□□□□ -0.38
CX3CR1-206ENST00000542107 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
CX3CR1-206ENST00000542107 IL16Q14005 1332 aa12.68□□□□□ -0.38
CX3CR1-206ENST00000542107 HDAC1Q13547 482 aaPredicted RBP12.67□□□□□ -0.38
CX3CR1-206ENST00000542107 NUDT16Q96DE0 195 aaKnown RBP12.67□□□□□ -0.38
CX3CR1-206ENST00000542107 WASLO00401 505 aaPredicted RBP12.67□□□□□ -0.38
CX3CR1-206ENST00000542107 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
CX3CR1-206ENST00000542107 COG3Q96JB2 828 aa12.67□□□□□ -0.38
CX3CR1-206ENST00000542107 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
CX3CR1-206ENST00000542107 VAMP4O75379 141 aa12.66□□□□□ -0.38
CX3CR1-206ENST00000542107 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
CX3CR1-206ENST00000542107 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
CX3CR1-206ENST00000542107 SMC5Q8IY18 1101 aa12.66□□□□□ -0.38
CX3CR1-206ENST00000542107 MBIPQ9NS73 344 aa12.66□□□□□ -0.38
CX3CR1-206ENST00000542107 GZF1Q9H116 711 aaPredicted RBP12.65□□□□□ -0.38
CX3CR1-206ENST00000542107 ALKQ9UM73 1620 aa12.65□□□□□ -0.38
CX3CR1-206ENST00000542107 RIMS2Q9UQ26 1411 aa12.65□□□□□ -0.38
CX3CR1-206ENST00000542107 NLRP1Q9C000 1473 aa12.65□□□□□ -0.38
CX3CR1-206ENST00000542107 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
CX3CR1-206ENST00000542107 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
CX3CR1-206ENST00000542107 IL13P35225 146 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 PNPLA6Q8IY17 1366 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 ARHGEF40Q8TER5 1519 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 GNAI1P63096 354 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 CHD1LQ86WJ1 897 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 KRT24Q2M2I5 525 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 PPIP5K1Q6PFW1 1433 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 AEBP1Q8IUX7 1158 aa12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 MRPL50Q8N5N7 158 aaKnown RBP12.64□□□□□ -0.39
CX3CR1-206ENST00000542107 METP08581 1390 aa12.63□□□□□ -0.39
CX3CR1-206ENST00000542107 ADGRB2O60241 1585 aa12.63□□□□□ -0.39
CX3CR1-206ENST00000542107 APBB1O00213 710 aa12.63□□□□□ -0.39
CX3CR1-206ENST00000542107 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
CX3CR1-206ENST00000542107 CCDC61Q9Y6R9 512 aa12.63□□□□□ -0.39
CX3CR1-206ENST00000542107 ZBTB7BO15156 539 aaPredicted RBP12.62□□□□□ -0.39
CX3CR1-206ENST00000542107 NUCB1Q02818 461 aa12.62□□□□□ -0.39
CX3CR1-206ENST00000542107 SULT6B1Q6IMI4 303 aa12.62□□□□□ -0.39
CX3CR1-206ENST00000542107 PREX1Q8TCU6 1659 aa12.62□□□□□ -0.39
CX3CR1-206ENST00000542107 ANTXR1Q9H6X2 564 aa12.62□□□□□ -0.39
CX3CR1-206ENST00000542107 CALD1Q05682 793 aaKnown RBP12.62□□□□□ -0.39
CX3CR1-206ENST00000542107 RICTORQ6R327 1708 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms