RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 U2SURPO15042 1029 aaKnown RBP14.1□□□□□ -0.15
NECAP1-206ENST00000542095 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.1□□□□□ -0.15
NECAP1-206ENST00000542095 SLIT1O75093 1534 aa14.09□□□□□ -0.15
NECAP1-206ENST00000542095 CEBPAP49715 358 aaPredicted RBP14.09□□□□□ -0.15
NECAP1-206ENST00000542095 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
NECAP1-206ENST00000542095 DIAPH1O60610 1272 aaKnown RBP14.09□□□□□ -0.15
NECAP1-206ENST00000542095 EID1Q9Y6B2 187 aa14.09□□□□□ -0.15
NECAP1-206ENST00000542095 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.08□□□□□ -0.16
NECAP1-206ENST00000542095 LTKP29376 864 aa14.08□□□□□ -0.16
NECAP1-206ENST00000542095 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
NECAP1-206ENST00000542095 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
NECAP1-206ENST00000542095 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
NECAP1-206ENST00000542095 ROBO2Q9HCK4 1378 aa14.08□□□□□ -0.16
NECAP1-206ENST00000542095 MAPK8IP3Q9UPT6 1336 aa14.07□□□□□ -0.16
NECAP1-206ENST00000542095 BCAR3O75815 825 aa14.07□□□□□ -0.16
NECAP1-206ENST00000542095 PLEKHF1Q96S99 279 aa14.07□□□□□ -0.16
NECAP1-206ENST00000542095 TOPAZ1Q8N9V7 1692 aa14.07□□□□□ -0.16
NECAP1-206ENST00000542095 TCERG1O14776 1098 aaKnown RBP14.07□□□□□ -0.16
NECAP1-206ENST00000542095 MYH16Q9H6N6 1097 aa14.06□□□□□ -0.16
NECAP1-206ENST00000542095 DIP2AQ14689 1571 aa14.05□□□□□ -0.16
NECAP1-206ENST00000542095 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
NECAP1-206ENST00000542095 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
NECAP1-206ENST00000542095 POLKQ9UBT6 870 aa14.04□□□□□ -0.16
NECAP1-206ENST00000542095 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
NECAP1-206ENST00000542095 PDE3AQ14432 1141 aa14.03□□□□□ -0.16
NECAP1-206ENST00000542095 AATKQ6ZMQ8 1374 aa14.03□□□□□ -0.16
NECAP1-206ENST00000542095 NRKQ7Z2Y5 1582 aa14.03□□□□□ -0.16
NECAP1-206ENST00000542095 CDK12Q9NYV4 1490 aaPredicted RBP14.03□□□□□ -0.16
NECAP1-206ENST00000542095 CANXP27824 592 aaKnown RBP14.03□□□□□ -0.16
NECAP1-206ENST00000542095 CENPQQ7L2Z9 268 aaPredicted RBP14.03□□□□□ -0.16
NECAP1-206ENST00000542095 NME9Q86XW9 330 aa14.03□□□□□ -0.16
NECAP1-206ENST00000542095 THEMISQ8N1K5 641 aaPredicted RBP14.03□□□□□ -0.16
NECAP1-206ENST00000542095 LRRC7Q96NW7 1537 aa14.03□□□□□ -0.16
NECAP1-206ENST00000542095 PTPRUQ92729 1446 aa14.03□□□□□ -0.16
NECAP1-206ENST00000542095 PRR36Q9H6K5 1346 aa14.03□□□□□ -0.16
NECAP1-206ENST00000542095 PLPPR3Q6T4P5 718 aa14.02□□□□□ -0.16
NECAP1-206ENST00000542095 COG3Q96JB2 828 aa14.02□□□□□ -0.16
NECAP1-206ENST00000542095 KDM2BQ8NHM5 1336 aa14.02□□□□□ -0.17
NECAP1-206ENST00000542095 PPM1GO15355 546 aaPredicted RBP14.02□□□□□ -0.17
NECAP1-206ENST00000542095 FCHSD2O94868 740 aa14.02□□□□□ -0.17
NECAP1-206ENST00000542095 MS4A1P11836 297 aa14.02□□□□□ -0.17
NECAP1-206ENST00000542095 RARSP54136 660 aaKnown RBP14.02□□□□□ -0.17
NECAP1-206ENST00000542095 SLC26A8Q96RN1 970 aa14.02□□□□□ -0.17
NECAP1-206ENST00000542095 TBX22Q9Y458 520 aa14.02□□□□□ -0.17
NECAP1-206ENST00000542095 NCKAP5LQ9HCH0 1330 aa14.01□□□□□ -0.17
NECAP1-206ENST00000542095 PTCH1Q13635 1447 aa14.01□□□□□ -0.17
NECAP1-206ENST00000542095 NEFMP07197 916 aa14□□□□□ -0.17
NECAP1-206ENST00000542095 CT47B1P0C2W7 299 aaPredicted RBP14□□□□□ -0.17
NECAP1-206ENST00000542095 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
NECAP1-206ENST00000542095 IL16Q14005 1332 aa14□□□□□ -0.17
NECAP1-206ENST00000542095 FBLN1P23142 703 aa13.99□□□□□ -0.17
NECAP1-206ENST00000542095 RIPK4P57078 832 aa13.99□□□□□ -0.17
NECAP1-206ENST00000542095 AMOTL2Q9Y2J4 779 aa13.99□□□□□ -0.17
NECAP1-206ENST00000542095 RIMS1Q86UR5 1692 aaKnown RBP13.99□□□□□ -0.17
NECAP1-206ENST00000542095 CEP170BQ9Y4F5 1589 aaPredicted RBP13.99□□□□□ -0.17
NECAP1-206ENST00000542095 PLEKHG3A1L390 1219 aa13.98□□□□□ -0.17
NECAP1-206ENST00000542095 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
NECAP1-206ENST00000542095 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
NECAP1-206ENST00000542095 EMILIN1Q9Y6C2 1016 aa13.98□□□□□ -0.17
NECAP1-206ENST00000542095 XRN1Q8IZH2 1706 aaKnown RBP13.98□□□□□ -0.17
NECAP1-206ENST00000542095 NALCNQ8IZF0 1738 aa13.98□□□□□ -0.17
NECAP1-206ENST00000542095 MSH5O43196 834 aa13.97□□□□□ -0.17
NECAP1-206ENST00000542095 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
NECAP1-206ENST00000542095 RGPD8O14715 1765 aaPredicted RBP13.97□□□□□ -0.17
NECAP1-206ENST00000542095 PRKAR2BP31323 418 aa13.97□□□□□ -0.17
NECAP1-206ENST00000542095 ACEP12821 1306 aa13.97□□□□□ -0.17
NECAP1-206ENST00000542095 USP6P35125 1406 aa13.96□□□□□ -0.17
NECAP1-206ENST00000542095 IL13P35225 146 aa13.96□□□□□ -0.17
NECAP1-206ENST00000542095 TTC21BQ7Z4L5 1316 aa13.96□□□□□ -0.17
NECAP1-206ENST00000542095 AAMPQ13685 434 aa13.96□□□□□ -0.18
NECAP1-206ENST00000542095 ANP32EQ9BTT0 268 aa13.96□□□□□ -0.18
NECAP1-206ENST00000542095 DLG5Q8TDM6 1919 aa13.96□□□□□ -0.18
NECAP1-206ENST00000542095 PANK1Q8TE04 598 aa13.95□□□□□ -0.18
NECAP1-206ENST00000542095 TSR2Q969E8 191 aaKnown RBP13.95□□□□□ -0.18
NECAP1-206ENST00000542095 PDE4AP27815 886 aa13.95□□□□□ -0.18
NECAP1-206ENST00000542095 COG6Q9Y2V7 657 aa13.95□□□□□ -0.18
NECAP1-206ENST00000542095 OVOS2A0A0J9YW53 1432 aa13.94□□□□□ -0.18
NECAP1-206ENST00000542095 OVOS2Q6IE36 1432 aa13.94□□□□□ -0.18
NECAP1-206ENST00000542095 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
NECAP1-206ENST00000542095 RRS1Q15050 365 aaKnown RBP13.94□□□□□ -0.18
NECAP1-206ENST00000542095 ZNF142P52746 1687 aaPredicted RBP13.94□□□□□ -0.18
NECAP1-206ENST00000542095 NUTM2FA1L443 756 aa13.94□□□□□ -0.18
NECAP1-206ENST00000542095 EXOSC9Q06265 439 aaKnown RBP13.94□□□□□ -0.18
NECAP1-206ENST00000542095 NFE2L2Q16236 605 aa13.94□□□□□ -0.18
NECAP1-206ENST00000542095 CLUAP1Q96AJ1 413 aa13.94□□□□□ -0.18
NECAP1-206ENST00000542095 BCL2L13Q9BXK5 485 aa13.94□□□□□ -0.18
NECAP1-206ENST00000542095 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
NECAP1-206ENST00000542095 HMOX1P09601 288 aa13.93□□□□□ -0.18
NECAP1-206ENST00000542095 BACH2Q9BYV9 841 aa13.93□□□□□ -0.18
NECAP1-206ENST00000542095 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
NECAP1-206ENST00000542095 ERICH6Q7L0X2 663 aa13.92□□□□□ -0.18
NECAP1-206ENST00000542095 TTC21AQ8NDW8 1320 aa13.92□□□□□ -0.18
NECAP1-206ENST00000542095 SSH2Q76I76 1423 aa13.92□□□□□ -0.18
NECAP1-206ENST00000542095 MYT1Q01538 1121 aa13.91□□□□□ -0.18
NECAP1-206ENST00000542095 ZKSCAN2Q63HK3 967 aa13.91□□□□□ -0.18
NECAP1-206ENST00000542095 FMN2Q9NZ56 1722 aa13.91□□□□□ -0.18
NECAP1-206ENST00000542095 SMC4Q9NTJ3 1288 aa13.91□□□□□ -0.18
NECAP1-206ENST00000542095 CHD2O14647 1828 aaKnown RBP13.91□□□□□ -0.18
NECAP1-206ENST00000542095 SKAP1Q86WV1 359 aa13.9□□□□□ -0.18
NECAP1-206ENST00000542095 PHACTR3Q96KR7 559 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms