RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 ZRANB1Q9UGI0 708 aa23.29■■□□□ 1.32
GABARAPL1-210ENST00000541960 RUNDC1Q96C34 613 aa23.28■■□□□ 1.32
GABARAPL1-210ENST00000541960 SLFN5Q08AF3 891 aa23.27■■□□□ 1.32
GABARAPL1-210ENST00000541960 NKTRP30414 1462 aaKnown RBP23.27■■□□□ 1.32
GABARAPL1-210ENST00000541960 PELP1Q8IZL8 1130 aaKnown RBP23.27■■□□□ 1.32
GABARAPL1-210ENST00000541960 ITSN1Q15811 1721 aa23.26■■□□□ 1.31
GABARAPL1-210ENST00000541960 TRMT2AQ8IZ69 625 aaKnown RBP23.26■■□□□ 1.31
GABARAPL1-210ENST00000541960 PNPLA6Q8IY17 1366 aa23.26■■□□□ 1.31
GABARAPL1-210ENST00000541960 U2AF1L5P0DN76 240 aaPredicted RBP23.25■■□□□ 1.31
GABARAPL1-210ENST00000541960 KCNA6P17658 529 aa23.25■■□□□ 1.31
GABARAPL1-210ENST00000541960 U2AF1Q01081 240 aaKnown RBP eCLIP23.25■■□□□ 1.31
GABARAPL1-210ENST00000541960 B4GALNT3Q6L9W6 998 aa23.24■■□□□ 1.31
GABARAPL1-210ENST00000541960 TCP11L2Q8N4U5 519 aa23.24■■□□□ 1.31
GABARAPL1-210ENST00000541960 RRP7AQ9Y3A4 280 aaKnown RBP23.24■■□□□ 1.31
GABARAPL1-210ENST00000541960 POLKQ9UBT6 870 aa23.24■■□□□ 1.31
GABARAPL1-210ENST00000541960 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
GABARAPL1-210ENST00000541960 WWC1Q8IX03 1113 aa23.23■■□□□ 1.31
GABARAPL1-210ENST00000541960 NGEFQ8N5V2 710 aa23.23■■□□□ 1.31
GABARAPL1-210ENST00000541960 SETD1BQ9UPS6 1966 aaKnown RBP23.22■■□□□ 1.31
GABARAPL1-210ENST00000541960 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
GABARAPL1-210ENST00000541960 ACEP12821 1306 aa23.22■■□□□ 1.31
GABARAPL1-210ENST00000541960 ZNF692Q9BU19 519 aaPredicted RBP23.22■■□□□ 1.31
GABARAPL1-210ENST00000541960 PIK3R4Q99570 1358 aa23.22■■□□□ 1.31
GABARAPL1-210ENST00000541960 NRKQ7Z2Y5 1582 aa23.21■■□□□ 1.31
GABARAPL1-210ENST00000541960 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
GABARAPL1-210ENST00000541960 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
GABARAPL1-210ENST00000541960 U2SURPO15042 1029 aaKnown RBP23.2■■□□□ 1.3
GABARAPL1-210ENST00000541960 MAP2P11137 1827 aaKnown RBP23.19■■□□□ 1.3
GABARAPL1-210ENST00000541960 PLEKHF1Q96S99 279 aa23.19■■□□□ 1.3
GABARAPL1-210ENST00000541960 PLIN1O60240 522 aa23.18■■□□□ 1.3
GABARAPL1-210ENST00000541960 EMILIN1Q9Y6C2 1016 aa23.18■■□□□ 1.3
GABARAPL1-210ENST00000541960 E9PSI1 815 aa23.18■■□□□ 1.3
GABARAPL1-210ENST00000541960 DIAPH1O60610 1272 aaKnown RBP23.18■■□□□ 1.3
GABARAPL1-210ENST00000541960 PPM1GO15355 546 aaPredicted RBP23.17■■□□□ 1.3
GABARAPL1-210ENST00000541960 USP6P35125 1406 aa23.17■■□□□ 1.3
GABARAPL1-210ENST00000541960 TTC21BQ7Z4L5 1316 aa23.17■■□□□ 1.3
GABARAPL1-210ENST00000541960 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
GABARAPL1-210ENST00000541960 COG3Q96JB2 828 aa23.16■■□□□ 1.3
GABARAPL1-210ENST00000541960 RGPD8O14715 1765 aaPredicted RBP23.16■■□□□ 1.3
GABARAPL1-210ENST00000541960 AATKQ6ZMQ8 1374 aa23.15■■□□□ 1.3
GABARAPL1-210ENST00000541960 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
GABARAPL1-210ENST00000541960 PMFBP1Q8TBY8 1022 aa23.15■■□□□ 1.3
GABARAPL1-210ENST00000541960 SSH2Q76I76 1423 aa23.14■■□□□ 1.3
GABARAPL1-210ENST00000541960 EXOC6Q8TAG9 804 aa23.14■■□□□ 1.29
GABARAPL1-210ENST00000541960 CCDC27Q2M243 656 aa23.13■■□□□ 1.29
GABARAPL1-210ENST00000541960 RRS1Q15050 365 aaKnown RBP23.13■■□□□ 1.29
GABARAPL1-210ENST00000541960 OVOS2A0A0J9YW53 1432 aa23.11■■□□□ 1.29
GABARAPL1-210ENST00000541960 OVOS2Q6IE36 1432 aa23.11■■□□□ 1.29
GABARAPL1-210ENST00000541960 CDK12Q9NYV4 1490 aaPredicted RBP23.11■■□□□ 1.29
GABARAPL1-210ENST00000541960 RBM33Q96EV2 1170 aaKnown RBP23.1■■□□□ 1.29
GABARAPL1-210ENST00000541960 NPHP4O75161 1426 aaPredicted RBP23.1■■□□□ 1.29
GABARAPL1-210ENST00000541960 NCBP3Q53F19 620 aaKnown RBP23.09■■□□□ 1.29
GABARAPL1-210ENST00000541960 NALCNQ8IZF0 1738 aa23.09■■□□□ 1.29
GABARAPL1-210ENST00000541960 FMN2Q9NZ56 1722 aa23.09■■□□□ 1.29
GABARAPL1-210ENST00000541960 C20orf194Q5TEA3 1177 aa23.09■■□□□ 1.29
GABARAPL1-210ENST00000541960 WDR63Q8IWG1 891 aa23.09■■□□□ 1.29
GABARAPL1-210ENST00000541960 LRRC7Q96NW7 1537 aa23.08■■□□□ 1.29
GABARAPL1-210ENST00000541960 ANKARQ7Z5J8 1434 aa23.08■■□□□ 1.29
GABARAPL1-210ENST00000541960 IL13P35225 146 aa23.08■■□□□ 1.29
GABARAPL1-210ENST00000541960 TMPOP42166 694 aaKnown RBP23.08■■□□□ 1.28
GABARAPL1-210ENST00000541960 CCDC136Q96JN2 1154 aa23.06■■□□□ 1.28
GABARAPL1-210ENST00000541960 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
GABARAPL1-210ENST00000541960 NGDNQ8NEJ9 315 aaKnown RBP23.06■■□□□ 1.28
GABARAPL1-210ENST00000541960 TRIM35Q9UPQ4 493 aa23.06■■□□□ 1.28
GABARAPL1-210ENST00000541960 MAPK8IP3Q9UPT6 1336 aa23.05■■□□□ 1.28
GABARAPL1-210ENST00000541960 FCHSD2O94868 740 aa23.04■■□□□ 1.28
GABARAPL1-210ENST00000541960 CRBNQ96SW2 442 aa23.04■■□□□ 1.28
GABARAPL1-210ENST00000541960 USP31Q70CQ4 1352 aa23.03■■□□□ 1.28
GABARAPL1-210ENST00000541960 BCAR3O75815 825 aa23.03■■□□□ 1.28
GABARAPL1-210ENST00000541960 HMOX1P09601 288 aa23.03■■□□□ 1.28
GABARAPL1-210ENST00000541960 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
GABARAPL1-210ENST00000541960 TTC21AQ8NDW8 1320 aa23.02■■□□□ 1.28
GABARAPL1-210ENST00000541960 PEAK1Q9H792 1746 aa23.01■■□□□ 1.27
GABARAPL1-210ENST00000541960 PIK3C2AO00443 1686 aa23■■□□□ 1.27
GABARAPL1-210ENST00000541960 PHACTR3Q96KR7 559 aa23■■□□□ 1.27
GABARAPL1-210ENST00000541960 RIPK4P57078 832 aa22.99■■□□□ 1.27
GABARAPL1-210ENST00000541960 PNNQ9H307 717 aaKnown RBP22.99■■□□□ 1.27
GABARAPL1-210ENST00000541960 ADGRL3Q9HAR2 1447 aa22.99■■□□□ 1.27
GABARAPL1-210ENST00000541960 SOX12O15370 315 aa22.98■■□□□ 1.27
GABARAPL1-210ENST00000541960 EIF4A2Q14240 407 aaKnown RBP22.96■■□□□ 1.27
GABARAPL1-210ENST00000541960 NWD1Q149M9 1564 aa22.96■■□□□ 1.27
GABARAPL1-210ENST00000541960 MYH16Q9H6N6 1097 aa22.95■■□□□ 1.27
GABARAPL1-210ENST00000541960 TSR2Q969E8 191 aaKnown RBP22.95■■□□□ 1.26
GABARAPL1-210ENST00000541960 FANCIQ9NVI1 1328 aa22.94■■□□□ 1.26
GABARAPL1-210ENST00000541960 HSP90AB2PQ58FF8 381 aa22.94■■□□□ 1.26
GABARAPL1-210ENST00000541960 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.94■■□□□ 1.26
GABARAPL1-210ENST00000541960 MARF1Q9Y4F3 1742 aaKnown RBP22.94■■□□□ 1.26
GABARAPL1-210ENST00000541960 MAP3K19Q56UN5 1328 aa22.93■■□□□ 1.26
GABARAPL1-210ENST00000541960 RARSP54136 660 aaKnown RBP22.93■■□□□ 1.26
GABARAPL1-210ENST00000541960 PHF8Q9UPP1 1060 aa22.93■■□□□ 1.26
GABARAPL1-210ENST00000541960 NFE2L2Q16236 605 aa22.92■■□□□ 1.26
GABARAPL1-210ENST00000541960 NUTM2GQ5VZR2 741 aa22.91■■□□□ 1.26
GABARAPL1-210ENST00000541960 AEBP1Q8IUX7 1158 aa22.91■■□□□ 1.26
GABARAPL1-210ENST00000541960 IL16Q14005 1332 aa22.91■■□□□ 1.26
GABARAPL1-210ENST00000541960 NLRP6P59044 892 aa22.9■■□□□ 1.26
GABARAPL1-210ENST00000541960 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
GABARAPL1-210ENST00000541960 NEFMP07197 916 aa22.88■■□□□ 1.25
GABARAPL1-210ENST00000541960 C14orf37Q86TY3 774 aa22.88■■□□□ 1.25
GABARAPL1-210ENST00000541960 ESCO1Q5FWF5 840 aa22.87■■□□□ 1.25
GABARAPL1-210ENST00000541960 USP54Q70EL1 1684 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms