RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 COG6Q9Y2V7 657 aa17.11■□□□□ 0.33
PRKAB1-206ENST00000541640 IGHDP01880 384 aa17.1■□□□□ 0.33
PRKAB1-206ENST00000541640 PNPLA6Q8IY17 1366 aa17.1■□□□□ 0.33
PRKAB1-206ENST00000541640 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
PRKAB1-206ENST00000541640 ATP7BP35670 1465 aa17.09■□□□□ 0.33
PRKAB1-206ENST00000541640 CT47B1P0C2W7 299 aaPredicted RBP17.09■□□□□ 0.33
PRKAB1-206ENST00000541640 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
PRKAB1-206ENST00000541640 NBR1Q14596 966 aa17.09■□□□□ 0.33
PRKAB1-206ENST00000541640 CDC42BPGQ6DT37 1551 aa17.09■□□□□ 0.33
PRKAB1-206ENST00000541640 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.33
PRKAB1-206ENST00000541640 CABP1Q9NZU7 370 aa17.08■□□□□ 0.32
PRKAB1-206ENST00000541640 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
PRKAB1-206ENST00000541640 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
PRKAB1-206ENST00000541640 RGS3P49796 1198 aa17.07■□□□□ 0.32
PRKAB1-206ENST00000541640 IL16Q14005 1332 aa17.06■□□□□ 0.32
PRKAB1-206ENST00000541640 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
PRKAB1-206ENST00000541640 TRIM35Q9UPQ4 493 aa17.05■□□□□ 0.32
PRKAB1-206ENST00000541640 DIAPH1O60610 1272 aaKnown RBP17.05■□□□□ 0.32
PRKAB1-206ENST00000541640 PNNQ9H307 717 aaKnown RBP17.05■□□□□ 0.32
PRKAB1-206ENST00000541640 RLBP1P12271 317 aa17.04■□□□□ 0.32
PRKAB1-206ENST00000541640 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
PRKAB1-206ENST00000541640 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
PRKAB1-206ENST00000541640 WAPLQ7Z5K2 1190 aa17.03■□□□□ 0.32
PRKAB1-206ENST00000541640 ZMYM3Q14202 1370 aa17.03■□□□□ 0.32
PRKAB1-206ENST00000541640 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.03■□□□□ 0.32
PRKAB1-206ENST00000541640 BCL2L13Q9BXK5 485 aa17.03■□□□□ 0.32
PRKAB1-206ENST00000541640 TNNQ9UQP3 1299 aa17.02■□□□□ 0.32
PRKAB1-206ENST00000541640 CPSF1Q10570 1443 aaKnown RBP17.01■□□□□ 0.31
PRKAB1-206ENST00000541640 ZKSCAN2Q63HK3 967 aa17.01■□□□□ 0.31
PRKAB1-206ENST00000541640 TSR2Q969E8 191 aaKnown RBP17.01■□□□□ 0.31
PRKAB1-206ENST00000541640 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
PRKAB1-206ENST00000541640 RTL5Q5HYW3 569 aaPredicted RBP17.01■□□□□ 0.31
PRKAB1-206ENST00000541640 FCHSD2O94868 740 aa17■□□□□ 0.31
PRKAB1-206ENST00000541640 MVPQ14764 893 aaKnown RBP17■□□□□ 0.31
PRKAB1-206ENST00000541640 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
PRKAB1-206ENST00000541640 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
PRKAB1-206ENST00000541640 EDC4Q6P2E9 1401 aaKnown RBP17■□□□□ 0.31
PRKAB1-206ENST00000541640 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
PRKAB1-206ENST00000541640 RIPK4P57078 832 aa16.99■□□□□ 0.31
PRKAB1-206ENST00000541640 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
PRKAB1-206ENST00000541640 TECPR2O15040 1411 aa16.99■□□□□ 0.31
PRKAB1-206ENST00000541640 FAM135BQ49AJ0 1406 aa16.99■□□□□ 0.31
PRKAB1-206ENST00000541640 METP08581 1390 aa16.99■□□□□ 0.31
PRKAB1-206ENST00000541640 WASLO00401 505 aaPredicted RBP16.99■□□□□ 0.31
PRKAB1-206ENST00000541640 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
PRKAB1-206ENST00000541640 FER1L4A9Z1Z3 1794 aa16.99■□□□□ 0.31
PRKAB1-206ENST00000541640 SIRT1Q96EB6 747 aa16.98■□□□□ 0.31
PRKAB1-206ENST00000541640 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
PRKAB1-206ENST00000541640 MON2Q7Z3U7 1717 aa16.98■□□□□ 0.31
PRKAB1-206ENST00000541640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRKAB1-206ENST00000541640 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
PRKAB1-206ENST00000541640 CPS1P31327 1500 aa16.98■□□□□ 0.31
PRKAB1-206ENST00000541640 PPIP5K1Q6PFW1 1433 aa16.98■□□□□ 0.31
PRKAB1-206ENST00000541640 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
PRKAB1-206ENST00000541640 RWDD1Q9H446 243 aaPredicted RBP16.97■□□□□ 0.31
PRKAB1-206ENST00000541640 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
PRKAB1-206ENST00000541640 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
PRKAB1-206ENST00000541640 SMC4Q9NTJ3 1288 aa16.96■□□□□ 0.31
PRKAB1-206ENST00000541640 HDGFP51858 240 aaKnown RBP16.96■□□□□ 0.3
PRKAB1-206ENST00000541640 FTSJ3Q8IY81 847 aaKnown RBP16.96■□□□□ 0.3
PRKAB1-206ENST00000541640 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.3
PRKAB1-206ENST00000541640 AKAP12Q02952 1782 aa16.95■□□□□ 0.3
PRKAB1-206ENST00000541640 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
PRKAB1-206ENST00000541640 SSH1Q8WYL5 1049 aa16.95■□□□□ 0.3
PRKAB1-206ENST00000541640 CDK12Q9NYV4 1490 aaPredicted RBP16.95■□□□□ 0.3
PRKAB1-206ENST00000541640 AATKQ6ZMQ8 1374 aa16.94■□□□□ 0.3
PRKAB1-206ENST00000541640 UBR1Q8IWV7 1749 aa16.94■□□□□ 0.3
PRKAB1-206ENST00000541640 ITSN1Q15811 1721 aa16.93■□□□□ 0.3
PRKAB1-206ENST00000541640 TRIM27P14373 513 aa16.93■□□□□ 0.3
PRKAB1-206ENST00000541640 C3P01024 1663 aa16.93■□□□□ 0.3
PRKAB1-206ENST00000541640 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
PRKAB1-206ENST00000541640 ATF7IPQ6VMQ6 1270 aa16.93■□□□□ 0.3
PRKAB1-206ENST00000541640 TNRQ92752 1358 aa16.93■□□□□ 0.3
PRKAB1-206ENST00000541640 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
PRKAB1-206ENST00000541640 PDZRN3Q9UPQ7 1066 aa16.92■□□□□ 0.3
PRKAB1-206ENST00000541640 USP19O94966 1318 aa16.92■□□□□ 0.3
PRKAB1-206ENST00000541640 NEFMP07197 916 aa16.92■□□□□ 0.3
PRKAB1-206ENST00000541640 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
PRKAB1-206ENST00000541640 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
PRKAB1-206ENST00000541640 DDX19BQ9UMR2 479 aa16.92■□□□□ 0.3
PRKAB1-206ENST00000541640 KIF16BQ96L93 1317 aa16.91■□□□□ 0.3
PRKAB1-206ENST00000541640 FBLN1P23142 703 aa16.91■□□□□ 0.3
PRKAB1-206ENST00000541640 ALDH1L2Q3SY69 923 aa16.91■□□□□ 0.3
PRKAB1-206ENST00000541640 NME9Q86XW9 330 aa16.91■□□□□ 0.3
PRKAB1-206ENST00000541640 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
PRKAB1-206ENST00000541640 TMEM2Q9UHN6 1383 aa16.9■□□□□ 0.3
PRKAB1-206ENST00000541640 IL13P35225 146 aa16.9■□□□□ 0.3
PRKAB1-206ENST00000541640 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
PRKAB1-206ENST00000541640 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
PRKAB1-206ENST00000541640 NOB1Q9ULX3 412 aaKnown RBP16.9■□□□□ 0.3
PRKAB1-206ENST00000541640 RIMS1Q86UR5 1692 aaKnown RBP16.9■□□□□ 0.3
PRKAB1-206ENST00000541640 EMILIN1Q9Y6C2 1016 aa16.9■□□□□ 0.3
PRKAB1-206ENST00000541640 HDAC1Q13547 482 aaPredicted RBP16.89■□□□□ 0.29
PRKAB1-206ENST00000541640 IPO8O15397 1037 aaKnown RBP16.88■□□□□ 0.29
PRKAB1-206ENST00000541640 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
PRKAB1-206ENST00000541640 BRPF1P55201 1214 aaPredicted RBP16.88■□□□□ 0.29
PRKAB1-206ENST00000541640 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
PRKAB1-206ENST00000541640 COG3Q96JB2 828 aa16.87■□□□□ 0.29
PRKAB1-206ENST00000541640 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
PRKAB1-206ENST00000541640 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms