RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 CLASP1Q7Z460 1538 aa19.03■□□□□ 0.64
VARS2-211ENST00000541562 MCM10Q7L590 875 aa19.02■□□□□ 0.64
VARS2-211ENST00000541562 TBC1D2Q9BYX2 928 aa19.02■□□□□ 0.64
VARS2-211ENST00000541562 POLKQ9UBT6 870 aa19.02■□□□□ 0.64
VARS2-211ENST00000541562 MYOM1P52179 1685 aa19.02■□□□□ 0.64
VARS2-211ENST00000541562 RNF17Q9BXT8 1623 aaKnown RBP19.01■□□□□ 0.63
VARS2-211ENST00000541562 TET3O43151 1660 aa19.01■□□□□ 0.63
VARS2-211ENST00000541562 UHRF1BP1LA0JNW5 1464 aa19.01■□□□□ 0.63
VARS2-211ENST00000541562 HSP90AA1P07900 732 aaKnown RBP19.01■□□□□ 0.63
VARS2-211ENST00000541562 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
VARS2-211ENST00000541562 SLC4A10Q6U841 1118 aa19■□□□□ 0.63
VARS2-211ENST00000541562 BECN1Q14457 450 aa18.99■□□□□ 0.63
VARS2-211ENST00000541562 KIDINS220Q9ULH0 1771 aa18.99■□□□□ 0.63
VARS2-211ENST00000541562 ANKRD36BQ8N2N9 1353 aa18.99■□□□□ 0.63
VARS2-211ENST00000541562 PLEKHF1Q96S99 279 aa18.99■□□□□ 0.63
VARS2-211ENST00000541562 C8orf58Q8NAV2 365 aa18.98■□□□□ 0.63
VARS2-211ENST00000541562 KIF1BO60333 1816 aa18.98■□□□□ 0.63
VARS2-211ENST00000541562 C22orf23Q9BZE7 217 aa18.98■□□□□ 0.63
VARS2-211ENST00000541562 EFCAB6Q5THR3 1501 aa18.98■□□□□ 0.63
VARS2-211ENST00000541562 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
VARS2-211ENST00000541562 SULT6B1Q6IMI4 303 aa18.97■□□□□ 0.63
VARS2-211ENST00000541562 MROH1Q8NDA8 1641 aa18.96■□□□□ 0.63
VARS2-211ENST00000541562 POGZQ7Z3K3 1410 aa18.96■□□□□ 0.63
VARS2-211ENST00000541562 FOXD4L5Q5VV16 416 aaPredicted RBP18.96■□□□□ 0.63
VARS2-211ENST00000541562 FOXD4L4Q8WXT5 416 aaPredicted RBP18.96■□□□□ 0.63
VARS2-211ENST00000541562 NPC1L1Q9UHC9 1359 aa18.96■□□□□ 0.63
VARS2-211ENST00000541562 FOXO3O43524 673 aa18.96■□□□□ 0.63
VARS2-211ENST00000541562 SMARCA5O60264 1052 aaPredicted RBP18.96■□□□□ 0.63
VARS2-211ENST00000541562 TSHZ3Q63HK5 1081 aa18.94■□□□□ 0.62
VARS2-211ENST00000541562 MBIPQ9NS73 344 aa18.94■□□□□ 0.62
VARS2-211ENST00000541562 NOL8Q76FK4 1167 aaKnown RBP18.94■□□□□ 0.62
VARS2-211ENST00000541562 SLC52A1Q9NWF4 448 aa18.94■□□□□ 0.62
VARS2-211ENST00000541562 NUDT16Q96DE0 195 aaKnown RBP18.93■□□□□ 0.62
VARS2-211ENST00000541562 DDX19BQ9UMR2 479 aa18.93■□□□□ 0.62
VARS2-211ENST00000541562 INO80Q9ULG1 1556 aaPredicted RBP18.93■□□□□ 0.62
VARS2-211ENST00000541562 DTNBO60941 627 aa18.93■□□□□ 0.62
VARS2-211ENST00000541562 COG3Q96JB2 828 aa18.93■□□□□ 0.62
VARS2-211ENST00000541562 HSP90AB2PQ58FF8 381 aa18.92■□□□□ 0.62
VARS2-211ENST00000541562 TWISTNBQ3B726 338 aaPredicted RBP18.92■□□□□ 0.62
VARS2-211ENST00000541562 LAMC1P11047 1609 aa18.92■□□□□ 0.62
VARS2-211ENST00000541562 F6X3S4 739 aa18.92■□□□□ 0.62
VARS2-211ENST00000541562 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
VARS2-211ENST00000541562 TULP4Q9NRJ4 1543 aa18.91■□□□□ 0.62
VARS2-211ENST00000541562 OTUD7AQ8TE49 926 aaPredicted RBP18.91■□□□□ 0.62
VARS2-211ENST00000541562 USP35Q9P2H5 1018 aa18.91■□□□□ 0.62
VARS2-211ENST00000541562 FOXD4L6Q3SYB3 417 aaPredicted RBP18.9■□□□□ 0.62
VARS2-211ENST00000541562 FOXD4L3Q6VB84 417 aaPredicted RBP18.9■□□□□ 0.62
VARS2-211ENST00000541562 RSPH6AQ9H0K4 717 aa18.9■□□□□ 0.62
VARS2-211ENST00000541562 MYOM2P54296 1465 aa18.89■□□□□ 0.61
VARS2-211ENST00000541562 TBC1D32Q96NH3 1257 aa18.89■□□□□ 0.61
VARS2-211ENST00000541562 QRICH2Q9H0J4 1663 aa18.89■□□□□ 0.61
VARS2-211ENST00000541562 YTHDC2Q9H6S0 1430 aaKnown RBP18.88■□□□□ 0.61
VARS2-211ENST00000541562 IPO8O15397 1037 aaKnown RBP18.88■□□□□ 0.61
VARS2-211ENST00000541562 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
VARS2-211ENST00000541562 ABCA9Q8IUA7 1624 aa18.88■□□□□ 0.61
VARS2-211ENST00000541562 HSP90AB1P08238 724 aaKnown RBP18.88■□□□□ 0.61
VARS2-211ENST00000541562 LMOD2Q6P5Q4 547 aa18.88■□□□□ 0.61
VARS2-211ENST00000541562 ABCC3O15438 1527 aa18.87■□□□□ 0.61
VARS2-211ENST00000541562 ZBTB40Q9NUA8 1239 aa18.87■□□□□ 0.61
VARS2-211ENST00000541562 TSPOAP1O95153 1857 aa18.86■□□□□ 0.61
VARS2-211ENST00000541562 VAMP4O75379 141 aa18.86■□□□□ 0.61
VARS2-211ENST00000541562 USHBP1Q8N6Y0 703 aa18.86■□□□□ 0.61
VARS2-211ENST00000541562 PANK2Q9BZ23 570 aa18.86■□□□□ 0.61
VARS2-211ENST00000541562 CHAMP1Q96JM3 812 aa18.86■□□□□ 0.61
VARS2-211ENST00000541562 FRMPD1Q5SYB0 1578 aa18.86■□□□□ 0.61
VARS2-211ENST00000541562 CD2BP2O95400 341 aaKnown RBP18.86■□□□□ 0.61
VARS2-211ENST00000541562 CHD1LQ86WJ1 897 aa18.86■□□□□ 0.61
VARS2-211ENST00000541562 NFE2L2Q16236 605 aa18.85■□□□□ 0.61
VARS2-211ENST00000541562 ADGRB1O14514 1584 aa18.85■□□□□ 0.61
VARS2-211ENST00000541562 WASLO00401 505 aaPredicted RBP18.85■□□□□ 0.61
VARS2-211ENST00000541562 HSCBQ8IWL3 235 aa18.85■□□□□ 0.61
VARS2-211ENST00000541562 GLI2P10070 1586 aa18.84■□□□□ 0.61
VARS2-211ENST00000541562 METP08581 1390 aa18.84■□□□□ 0.61
VARS2-211ENST00000541562 ADGRB3O60242 1522 aa18.84■□□□□ 0.61
VARS2-211ENST00000541562 NCLP19338 710 aaKnown RBP18.84■□□□□ 0.61
VARS2-211ENST00000541562 FCHSD2O94868 740 aa18.83■□□□□ 0.61
VARS2-211ENST00000541562 ABCC11Q96J66 1382 aa18.83■□□□□ 0.6
VARS2-211ENST00000541562 CCDC27Q2M243 656 aa18.82■□□□□ 0.6
VARS2-211ENST00000541562 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
VARS2-211ENST00000541562 SIRT2Q8IXJ6 389 aa18.82■□□□□ 0.6
VARS2-211ENST00000541562 NGDNQ8NEJ9 315 aaKnown RBP18.82■□□□□ 0.6
VARS2-211ENST00000541562 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
VARS2-211ENST00000541562 DEPDC5O75140 1603 aa18.82■□□□□ 0.6
VARS2-211ENST00000541562 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
VARS2-211ENST00000541562 XPCQ01831 940 aaPredicted RBP18.81■□□□□ 0.6
VARS2-211ENST00000541562 NGEFQ8N5V2 710 aa18.81■□□□□ 0.6
VARS2-211ENST00000541562 SIGLEC1Q9BZZ2 1709 aa18.8■□□□□ 0.6
VARS2-211ENST00000541562 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
VARS2-211ENST00000541562 G2E3Q7L622 706 aa18.8■□□□□ 0.6
VARS2-211ENST00000541562 MRPL50Q8N5N7 158 aaKnown RBP18.8■□□□□ 0.6
VARS2-211ENST00000541562 IL13P35225 146 aa18.79■□□□□ 0.6
VARS2-211ENST00000541562 CCDC61Q9Y6R9 512 aa18.79■□□□□ 0.6
VARS2-211ENST00000541562 KIF16BQ96L93 1317 aa18.79■□□□□ 0.6
VARS2-211ENST00000541562 ZBTB7BO15156 539 aaPredicted RBP18.79■□□□□ 0.6
VARS2-211ENST00000541562 PPIP5K1Q6PFW1 1433 aa18.79■□□□□ 0.6
VARS2-211ENST00000541562 EIF4A2Q14240 407 aaKnown RBP18.78■□□□□ 0.6
VARS2-211ENST00000541562 MEIS3Q99687 375 aa18.78■□□□□ 0.6
VARS2-211ENST00000541562 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
VARS2-211ENST00000541562 AMPHP49418 695 aa18.77■□□□□ 0.6
VARS2-211ENST00000541562 MAP4K4O95819 1239 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms