RNA–Protein interactions for RNA: ENST00000541537.5

DDX47-206, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 1,517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-206ENST00000541537 USP6P35125 1406 aa14.33□□□□□ -0.11
DDX47-206ENST00000541537 PXDNQ92626 1479 aa14.33□□□□□ -0.12
DDX47-206ENST00000541537 HDGFL2Q7Z4V5 671 aaPredicted RBP14.32□□□□□ -0.12
DDX47-206ENST00000541537 DDX17Q92841 729 aaKnown RBP14.32□□□□□ -0.12
DDX47-206ENST00000541537 KTN1Q86UP2 1357 aaKnown RBP14.32□□□□□ -0.12
DDX47-206ENST00000541537 TRPM3Q9HCF6 1732 aaPredicted RBP14.32□□□□□ -0.12
DDX47-206ENST00000541537 PANK3Q9H999 370 aa14.31□□□□□ -0.12
DDX47-206ENST00000541537 XPCQ01831 940 aaPredicted RBP14.31□□□□□ -0.12
DDX47-206ENST00000541537 ZNF692Q9BU19 519 aaPredicted RBP14.31□□□□□ -0.12
DDX47-206ENST00000541537 EDC4Q6P2E9 1401 aaKnown RBP14.3□□□□□ -0.12
DDX47-206ENST00000541537 SSH2Q76I76 1423 aa14.3□□□□□ -0.12
DDX47-206ENST00000541537 PHLPP1O60346 1717 aa14.3□□□□□ -0.12
DDX47-206ENST00000541537 PSME1Q06323 249 aa14.3□□□□□ -0.12
DDX47-206ENST00000541537 CARD14Q9BXL6 1004 aa14.3□□□□□ -0.12
DDX47-206ENST00000541537 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
DDX47-206ENST00000541537 NSD3Q9BZ95 1437 aa14.3□□□□□ -0.12
DDX47-206ENST00000541537 DDX10Q13206 875 aaKnown RBP14.29□□□□□ -0.12
DDX47-206ENST00000541537 BRD4O60885 1362 aaPredicted RBP14.29□□□□□ -0.12
DDX47-206ENST00000541537 COL16A1Q07092 1604 aaPredicted RBP14.29□□□□□ -0.12
DDX47-206ENST00000541537 KRT28Q7Z3Y7 464 aa14.28□□□□□ -0.12
DDX47-206ENST00000541537 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
DDX47-206ENST00000541537 ALS2Q96Q42 1657 aa14.27□□□□□ -0.12
DDX47-206ENST00000541537 SBNO1A3KN83 1393 aa14.27□□□□□ -0.12
DDX47-206ENST00000541537 PIK3C2AO00443 1686 aa14.27□□□□□ -0.13
DDX47-206ENST00000541537 TTC21BQ7Z4L5 1316 aa14.26□□□□□ -0.13
DDX47-206ENST00000541537 KIF20BQ96Q89 1820 aa14.26□□□□□ -0.13
DDX47-206ENST00000541537 TNS3Q68CZ2 1445 aa14.26□□□□□ -0.13
DDX47-206ENST00000541537 PER1O15534 1290 aaPredicted RBP14.25□□□□□ -0.13
DDX47-206ENST00000541537 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
DDX47-206ENST00000541537 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
DDX47-206ENST00000541537 TTC21AQ8NDW8 1320 aa14.25□□□□□ -0.13
DDX47-206ENST00000541537 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
DDX47-206ENST00000541537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.25□□□□□ -0.13
DDX47-206ENST00000541537 SPATA31A3Q5VYP0 1347 aa14.24□□□□□ -0.13
DDX47-206ENST00000541537 FBXO41Q8TF61 875 aa14.24□□□□□ -0.13
DDX47-206ENST00000541537 KNSTRNQ9Y448 316 aa14.24□□□□□ -0.13
DDX47-206ENST00000541537 CGNL1Q0VF96 1302 aa14.23□□□□□ -0.13
DDX47-206ENST00000541537 USP54Q70EL1 1684 aa14.23□□□□□ -0.13
DDX47-206ENST00000541537 MARF1Q9Y4F3 1742 aaKnown RBP14.23□□□□□ -0.13
DDX47-206ENST00000541537 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
DDX47-206ENST00000541537 NME9Q86XW9 330 aa14.22□□□□□ -0.13
DDX47-206ENST00000541537 ANKRD26Q9UPS8 1709 aa14.22□□□□□ -0.13
DDX47-206ENST00000541537 ARHGEF10O15013 1369 aa14.22□□□□□ -0.13
DDX47-206ENST00000541537 FYB1O15117 783 aa14.21□□□□□ -0.13
DDX47-206ENST00000541537 HSPA1LP34931 641 aa14.21□□□□□ -0.13
DDX47-206ENST00000541537 MED1Q15648 1581 aaPredicted RBP14.21□□□□□ -0.13
DDX47-206ENST00000541537 ABTB2Q8N961 1025 aa14.21□□□□□ -0.13
DDX47-206ENST00000541537 LRRC59Q96AG4 307 aaKnown RBP14.21□□□□□ -0.13
DDX47-206ENST00000541537 OVOS2A0A0J9YW53 1432 aa14.21□□□□□ -0.14
DDX47-206ENST00000541537 OVOS2Q6IE36 1432 aa14.21□□□□□ -0.14
DDX47-206ENST00000541537 LMOD2Q6P5Q4 547 aa14.2□□□□□ -0.14
DDX47-206ENST00000541537 NSD2O96028 1365 aa14.2□□□□□ -0.14
DDX47-206ENST00000541537 USP31Q70CQ4 1352 aa14.2□□□□□ -0.14
DDX47-206ENST00000541537 NPC1L1Q9UHC9 1359 aa14.2□□□□□ -0.14
DDX47-206ENST00000541537 COL22A1Q8NFW1 1626 aaPredicted RBP14.2□□□□□ -0.14
DDX47-206ENST00000541537 CRYBG1Q9Y4K1 1723 aa14.2□□□□□ -0.14
DDX47-206ENST00000541537 SHPRHQ149N8 1683 aa14.2□□□□□ -0.14
DDX47-206ENST00000541537 PNPLA6Q8IY17 1366 aa14.2□□□□□ -0.14
DDX47-206ENST00000541537 ABCA3Q99758 1704 aa14.19□□□□□ -0.14
DDX47-206ENST00000541537 NUTM2GQ5VZR2 741 aa14.19□□□□□ -0.14
DDX47-206ENST00000541537 GGNBP2Q9H3C7 697 aa14.19□□□□□ -0.14
DDX47-206ENST00000541537 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
DDX47-206ENST00000541537 NLRP6P59044 892 aa14.18□□□□□ -0.14
DDX47-206ENST00000541537 PHRF1Q9P1Y6 1649 aaKnown RBP14.18□□□□□ -0.14
DDX47-206ENST00000541537 USP19O94966 1318 aa14.18□□□□□ -0.14
DDX47-206ENST00000541537 JCADQ9P266 1359 aa14.17□□□□□ -0.14
DDX47-206ENST00000541537 SLIT3O75094 1523 aa14.17□□□□□ -0.14
DDX47-206ENST00000541537 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
DDX47-206ENST00000541537 NLRP13Q86W25 1043 aa14.16□□□□□ -0.14
DDX47-206ENST00000541537 COG3Q96JB2 828 aa14.16□□□□□ -0.14
DDX47-206ENST00000541537 NFAT5O94916 1531 aa14.14□□□□□ -0.15
DDX47-206ENST00000541537 CNGB1Q14028 1251 aaPredicted RBP14.14□□□□□ -0.15
DDX47-206ENST00000541537 CABLES1Q8TDN4 633 aa14.14□□□□□ -0.15
DDX47-206ENST00000541537 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
DDX47-206ENST00000541537 PARD3Q8TEW0 1356 aa14.13□□□□□ -0.15
DDX47-206ENST00000541537 MORC1Q86VD1 984 aa14.12□□□□□ -0.15
DDX47-206ENST00000541537 GCP02774 474 aa14.11□□□□□ -0.15
DDX47-206ENST00000541537 LTN1O94822 1766 aa14.11□□□□□ -0.15
DDX47-206ENST00000541537 SOX12O15370 315 aa14.1□□□□□ -0.15
DDX47-206ENST00000541537 DIEXFQ68CQ4 756 aaKnown RBP14.1□□□□□ -0.15
DDX47-206ENST00000541537 KCNH5Q8NCM2 988 aa14.1□□□□□ -0.15
DDX47-206ENST00000541537 SPATA31A6Q5VVP1 1343 aa14.1□□□□□ -0.15
DDX47-206ENST00000541537 MAP2P11137 1827 aaKnown RBP14.1□□□□□ -0.15
DDX47-206ENST00000541537 TNNT2P45379 298 aaPredicted RBP14.1□□□□□ -0.15
DDX47-206ENST00000541537 C1QBPQ07021 282 aaKnown RBP14.1□□□□□ -0.15
DDX47-206ENST00000541537 PRKRIP1Q9H875 184 aaPredicted RBP14.1□□□□□ -0.15
DDX47-206ENST00000541537 AATKQ6ZMQ8 1374 aa14.09□□□□□ -0.15
DDX47-206ENST00000541537 FBLN1P23142 703 aa14.09□□□□□ -0.15
DDX47-206ENST00000541537 HAP1P54257 671 aaPredicted RBP14.09□□□□□ -0.15
DDX47-206ENST00000541537 CPDO75976 1380 aa14.09□□□□□ -0.15
DDX47-206ENST00000541537 LRP6O75581 1613 aa14.08□□□□□ -0.15
DDX47-206ENST00000541537 RALBP1Q15311 655 aa14.08□□□□□ -0.16
DDX47-206ENST00000541537 ANP32CO43423 234 aa14.07□□□□□ -0.16
DDX47-206ENST00000541537 SMG6Q86US8 1419 aaKnown RBP14.07□□□□□ -0.16
DDX47-206ENST00000541537 KIAA0232Q92628 1395 aa14.07□□□□□ -0.16
DDX47-206ENST00000541537 PEAK1Q9H792 1746 aa14.06□□□□□ -0.16
DDX47-206ENST00000541537 MAP3K19Q56UN5 1328 aa14.06□□□□□ -0.16
DDX47-206ENST00000541537 NUTM2BA6NNL0 878 aaPredicted RBP14.06□□□□□ -0.16
DDX47-206ENST00000541537 NUTM2EB1AL46 878 aaPredicted RBP14.06□□□□□ -0.16
DDX47-206ENST00000541537 ZC3H6P61129 1189 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms