RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
AC005840.4-201ENST00000541242 NINLQ9Y2I6 1382 aa18.77■□□□□ 0.6
AC005840.4-201ENST00000541242 VGFO15240 615 aaPredicted RBP18.76■□□□□ 0.59
AC005840.4-201ENST00000541242 ZNF692Q9BU19 519 aaPredicted RBP18.75■□□□□ 0.59
AC005840.4-201ENST00000541242 MYO5BQ9ULV0 1848 aa18.74■□□□□ 0.59
AC005840.4-201ENST00000541242 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
AC005840.4-201ENST00000541242 TRIM44Q96DX7 344 aaPredicted RBP18.73■□□□□ 0.59
AC005840.4-201ENST00000541242 RWDD1Q9H446 243 aaPredicted RBP18.73■□□□□ 0.59
AC005840.4-201ENST00000541242 SLC52A1Q9NWF4 448 aa18.73■□□□□ 0.59
AC005840.4-201ENST00000541242 TNNT2P45379 298 aaPredicted RBP18.72■□□□□ 0.59
AC005840.4-201ENST00000541242 NSD3Q9BZ95 1437 aa18.72■□□□□ 0.59
AC005840.4-201ENST00000541242 PREX1Q8TCU6 1659 aa18.72■□□□□ 0.59
AC005840.4-201ENST00000541242 DDX11L8A8MPP1 907 aa18.71■□□□□ 0.59
AC005840.4-201ENST00000541242 HSCBQ8IWL3 235 aa18.71■□□□□ 0.59
AC005840.4-201ENST00000541242 ARHGEF28Q8N1W1 1705 aaKnown RBP18.71■□□□□ 0.59
AC005840.4-201ENST00000541242 SAFB2Q14151 953 aaKnown RBP eCLIP18.69■□□□□ 0.58
AC005840.4-201ENST00000541242 TNPO1Q92973 898 aaKnown RBP18.69■□□□□ 0.58
AC005840.4-201ENST00000541242 TMEM131LA2VDJ0 1609 aa18.69■□□□□ 0.58
AC005840.4-201ENST00000541242 STK26Q9P289 416 aa18.68■□□□□ 0.58
AC005840.4-201ENST00000541242 TULP4Q9NRJ4 1543 aa18.68■□□□□ 0.58
AC005840.4-201ENST00000541242 FOXD4L1Q9NU39 408 aa18.68■□□□□ 0.58
AC005840.4-201ENST00000541242 ZMYM3Q14202 1370 aa18.68■□□□□ 0.58
AC005840.4-201ENST00000541242 TCP11L2Q8N4U5 519 aa18.67■□□□□ 0.58
AC005840.4-201ENST00000541242 ZFYVE9O95405 1425 aa18.67■□□□□ 0.58
AC005840.4-201ENST00000541242 MORC1Q86VD1 984 aa18.66■□□□□ 0.58
AC005840.4-201ENST00000541242 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
AC005840.4-201ENST00000541242 MVPQ14764 893 aaKnown RBP18.65■□□□□ 0.58
AC005840.4-201ENST00000541242 KIAA1211Q6ZU35 1233 aa18.65■□□□□ 0.58
AC005840.4-201ENST00000541242 SHPRHQ149N8 1683 aa18.65■□□□□ 0.58
AC005840.4-201ENST00000541242 EVC2Q86UK5 1308 aa18.65■□□□□ 0.58
AC005840.4-201ENST00000541242 DDIT3P35638 169 aa18.65■□□□□ 0.58
AC005840.4-201ENST00000541242 AK9Q5TCS8 1911 aa18.65■□□□□ 0.58
AC005840.4-201ENST00000541242 NGEFQ8N5V2 710 aa18.64■□□□□ 0.57
AC005840.4-201ENST00000541242 POLR3AO14802 1390 aaPredicted RBP18.63■□□□□ 0.57
AC005840.4-201ENST00000541242 AAMPQ13685 434 aa18.63■□□□□ 0.57
AC005840.4-201ENST00000541242 FTSJ3Q8IY81 847 aaKnown RBP18.63■□□□□ 0.57
AC005840.4-201ENST00000541242 NCOA3Q9Y6Q9 1424 aa18.63■□□□□ 0.57
AC005840.4-201ENST00000541242 TPM2P07951 284 aa18.62■□□□□ 0.57
AC005840.4-201ENST00000541242 RUNDC1Q96C34 613 aa18.62■□□□□ 0.57
AC005840.4-201ENST00000541242 RBM10P98175 930 aaKnown RBP18.61■□□□□ 0.57
AC005840.4-201ENST00000541242 PUS7Q96PZ0 661 aaKnown RBP18.61■□□□□ 0.57
AC005840.4-201ENST00000541242 ISY1Q9ULR0 285 aaKnown RBP18.61■□□□□ 0.57
AC005840.4-201ENST00000541242 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
AC005840.4-201ENST00000541242 DZIP1LQ8IYY4 767 aaKnown RBP18.6■□□□□ 0.57
AC005840.4-201ENST00000541242 CD2BP2O95400 341 aaKnown RBP18.6■□□□□ 0.57
AC005840.4-201ENST00000541242 MLECQ14165 292 aa18.6■□□□□ 0.57
AC005840.4-201ENST00000541242 PDCL3Q9H2J4 239 aa18.59■□□□□ 0.57
AC005840.4-201ENST00000541242 PTPRMP28827 1452 aa18.59■□□□□ 0.57
AC005840.4-201ENST00000541242 ANKRD36BQ8N2N9 1353 aa18.59■□□□□ 0.57
AC005840.4-201ENST00000541242 ZKSCAN2Q63HK3 967 aa18.59■□□□□ 0.57
AC005840.4-201ENST00000541242 TSR2Q969E8 191 aaKnown RBP18.59■□□□□ 0.57
AC005840.4-201ENST00000541242 USP32Q8NFA0 1604 aa18.58■□□□□ 0.57
AC005840.4-201ENST00000541242 RAB3GAP1Q15042 981 aa18.58■□□□□ 0.57
AC005840.4-201ENST00000541242 PRAM1Q96QH2 718 aa18.58■□□□□ 0.57
AC005840.4-201ENST00000541242 MINK1Q8N4C8 1332 aaPredicted RBP18.58■□□□□ 0.56
AC005840.4-201ENST00000541242 CLTCQ00610 1675 aaKnown RBP18.58■□□□□ 0.56
AC005840.4-201ENST00000541242 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.56
AC005840.4-201ENST00000541242 MTHFSP49914 203 aa18.58■□□□□ 0.56
AC005840.4-201ENST00000541242 ITPRIPQ8IWB1 547 aa18.58■□□□□ 0.56
AC005840.4-201ENST00000541242 GBP4Q96PP9 640 aa18.58■□□□□ 0.56
AC005840.4-201ENST00000541242 AGLP35573 1532 aa18.58■□□□□ 0.56
AC005840.4-201ENST00000541242 REREQ9P2R6 1566 aa18.57■□□□□ 0.56
AC005840.4-201ENST00000541242 SMC5Q8IY18 1101 aa18.57■□□□□ 0.56
AC005840.4-201ENST00000541242 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
AC005840.4-201ENST00000541242 STAG3Q9UJ98 1225 aa18.57■□□□□ 0.56
AC005840.4-201ENST00000541242 YTHDC2Q9H6S0 1430 aaKnown RBP18.57■□□□□ 0.56
AC005840.4-201ENST00000541242 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
AC005840.4-201ENST00000541242 PODXL2Q9NZ53 605 aa18.57■□□□□ 0.56
AC005840.4-201ENST00000541242 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
AC005840.4-201ENST00000541242 ALKQ9UM73 1620 aa18.56■□□□□ 0.56
AC005840.4-201ENST00000541242 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
AC005840.4-201ENST00000541242 NASPP49321 788 aaPredicted RBP18.56■□□□□ 0.56
AC005840.4-201ENST00000541242 TRIM27P14373 513 aa18.55■□□□□ 0.56
AC005840.4-201ENST00000541242 SSFA2P28290 1259 aa18.55■□□□□ 0.56
AC005840.4-201ENST00000541242 RBM25P49756 843 aaKnown RBP18.55■□□□□ 0.56
AC005840.4-201ENST00000541242 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
AC005840.4-201ENST00000541242 SNX21Q969T3 373 aa18.55■□□□□ 0.56
AC005840.4-201ENST00000541242 LNPKQ9C0E8 428 aa18.55■□□□□ 0.56
AC005840.4-201ENST00000541242 SMC4Q9NTJ3 1288 aa18.55■□□□□ 0.56
AC005840.4-201ENST00000541242 A0A1W2PP64 1363 aa18.54■□□□□ 0.56
AC005840.4-201ENST00000541242 RIPK4P57078 832 aa18.54■□□□□ 0.56
AC005840.4-201ENST00000541242 CCDC173Q0VFZ6 552 aa18.54■□□□□ 0.56
AC005840.4-201ENST00000541242 ZSCAN30Q86W11 494 aa18.53■□□□□ 0.56
AC005840.4-201ENST00000541242 KIF2CQ99661 725 aa18.53■□□□□ 0.56
AC005840.4-201ENST00000541242 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
AC005840.4-201ENST00000541242 HDAC1Q13547 482 aaPredicted RBP18.52■□□□□ 0.56
AC005840.4-201ENST00000541242 SKOR2Q2VWA4 1001 aaPredicted RBP18.52■□□□□ 0.56
AC005840.4-201ENST00000541242 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.56
AC005840.4-201ENST00000541242 PPP1R9BQ96SB3 815 aa18.52■□□□□ 0.56
AC005840.4-201ENST00000541242 EXOSC9Q06265 439 aaKnown RBP18.51■□□□□ 0.55
AC005840.4-201ENST00000541242 OFD1O75665 1012 aa18.51■□□□□ 0.55
AC005840.4-201ENST00000541242 ARID3AQ99856 593 aa18.51■□□□□ 0.55
AC005840.4-201ENST00000541242 CIZ1Q9ULV3 898 aaPredicted RBP18.51■□□□□ 0.55
AC005840.4-201ENST00000541242 MSNP26038 577 aaKnown RBP18.5■□□□□ 0.55
AC005840.4-201ENST00000541242 FAM13BQ9NYF5 915 aa18.5■□□□□ 0.55
AC005840.4-201ENST00000541242 R3HCC1Q9Y3T6 440 aaKnown RBP18.5■□□□□ 0.55
AC005840.4-201ENST00000541242 SPATA31D1Q6ZQQ2 1576 aa18.5■□□□□ 0.55
AC005840.4-201ENST00000541242 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
AC005840.4-201ENST00000541242 GGNBP2Q9H3C7 697 aa18.5■□□□□ 0.55
AC005840.4-201ENST00000541242 DDX49Q9Y6V7 483 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms