RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, human

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRE11-210	ENST00000541157	ADGRB2	O60241	1585 aa		13.73	□□□□□ -0.21
MRE11-210	ENST00000541157	CCER2	I3L3R5	266 aa		13.72	□□□□□ -0.21
MRE11-210	ENST00000541157	PER1	O15534	1290 aa	Predicted RBP	13.72	□□□□□ -0.21
MRE11-210	ENST00000541157	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.72	□□□□□ -0.21
MRE11-210	ENST00000541157	LMTK3	Q96Q04	1460 aa		13.72	□□□□□ -0.21
MRE11-210	ENST00000541157	NINL	Q9Y2I6	1382 aa		13.71	□□□□□ -0.21
MRE11-210	ENST00000541157	IFNL1	Q8IU54	200 aa		13.71	□□□□□ -0.21
MRE11-210	ENST00000541157	AMOTL2	Q9Y2J4	779 aa		13.71	□□□□□ -0.21
MRE11-210	ENST00000541157	ATAD2	Q6PL18	1390 aa		13.71	□□□□□ -0.22
MRE11-210	ENST00000541157	NCKAP5L	Q9HCH0	1330 aa		13.7	□□□□□ -0.22
MRE11-210	ENST00000541157	KTN1	Q86UP2	1357 aa	Known RBP	13.7	□□□□□ -0.22
MRE11-210	ENST00000541157	CHD2	O14647	1828 aa	Known RBP	13.69	□□□□□ -0.22
MRE11-210	ENST00000541157	SRPK2	P78362	688 aa	Known RBP	13.69	□□□□□ -0.22
MRE11-210	ENST00000541157	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.69	□□□□□ -0.22
MRE11-210	ENST00000541157	CABP2	Q9NPB3	220 aa		13.69	□□□□□ -0.22
MRE11-210	ENST00000541157	PCDHB8	Q9UN66	801 aa		13.69	□□□□□ -0.22
MRE11-210	ENST00000541157	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.69	□□□□□ -0.22
MRE11-210	ENST00000541157	NWD1	Q149M9	1564 aa		13.68	□□□□□ -0.22
MRE11-210	ENST00000541157	CDK19	Q9BWU1	502 aa		13.68	□□□□□ -0.22
MRE11-210	ENST00000541157	WASL	O00401	505 aa	Predicted RBP	13.67	□□□□□ -0.22
MRE11-210	ENST00000541157	KCNA6	P17658	529 aa		13.67	□□□□□ -0.22
MRE11-210	ENST00000541157	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.67	□□□□□ -0.22
MRE11-210	ENST00000541157	PARD3	Q8TEW0	1356 aa		13.67	□□□□□ -0.22
MRE11-210	ENST00000541157	NPC1L1	Q9UHC9	1359 aa		13.67	□□□□□ -0.22
MRE11-210	ENST00000541157	USP32	Q8NFA0	1604 aa		13.66	□□□□□ -0.22
MRE11-210	ENST00000541157	RALBP1	Q15311	655 aa		13.66	□□□□□ -0.22
MRE11-210	ENST00000541157	TMC1	Q8TDI8	760 aa		13.66	□□□□□ -0.22
MRE11-210	ENST00000541157	SLC12A5	Q9H2X9	1139 aa		13.66	□□□□□ -0.22
MRE11-210	ENST00000541157	RTN4	Q9NQC3	1192 aa	Known RBP	13.66	□□□□□ -0.22
MRE11-210	ENST00000541157	KNSTRN	Q9Y448	316 aa		13.66	□□□□□ -0.22
MRE11-210	ENST00000541157	ANKRD36B	Q8N2N9	1353 aa		13.66	□□□□□ -0.22
MRE11-210	ENST00000541157	TRPC6	Q9Y210	931 aa		13.65	□□□□□ -0.22
MRE11-210	ENST00000541157	HSPA2	P54652	639 aa		13.64	□□□□□ -0.23
MRE11-210	ENST00000541157	CARD14	Q9BXL6	1004 aa		13.64	□□□□□ -0.23
MRE11-210	ENST00000541157	ATP7B	P35670	1465 aa		13.63	□□□□□ -0.23
MRE11-210	ENST00000541157	CD163L1	Q9NR16	1453 aa		13.63	□□□□□ -0.23
MRE11-210	ENST00000541157	RNF25	Q96BH1	459 aa	Predicted RBP	13.63	□□□□□ -0.23
MRE11-210	ENST00000541157	NSD3	Q9BZ95	1437 aa		13.63	□□□□□ -0.23
MRE11-210	ENST00000541157	NKTR	P30414	1462 aa	Known RBP	13.62	□□□□□ -0.23
MRE11-210	ENST00000541157	TOPAZ1	Q8N9V7	1692 aa		13.62	□□□□□ -0.23
MRE11-210	ENST00000541157	CDC42BPG	Q6DT37	1551 aa		13.62	□□□□□ -0.23
MRE11-210	ENST00000541157	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.62	□□□□□ -0.23
MRE11-210	ENST00000541157		A0A1W2PP64	1363 aa		13.61	□□□□□ -0.23
MRE11-210	ENST00000541157	STRC	Q7RTU9	1775 aa		13.61	□□□□□ -0.23
MRE11-210	ENST00000541157	DCBLD2	Q96PD2	775 aa		13.61	□□□□□ -0.23
MRE11-210	ENST00000541157	TERF2IP	Q9NYB0	399 aa		13.61	□□□□□ -0.23
MRE11-210	ENST00000541157	NALCN	Q8IZF0	1738 aa		13.61	□□□□□ -0.23
MRE11-210	ENST00000541157	RGL2	O15211	777 aa		13.6	□□□□□ -0.23
MRE11-210	ENST00000541157	CNGB1	Q14028	1251 aa	Predicted RBP	13.6	□□□□□ -0.23
MRE11-210	ENST00000541157	CC2D1B	Q5T0F9	858 aa	Known RBP	13.6	□□□□□ -0.23
MRE11-210	ENST00000541157	PPIP5K1	Q6PFW1	1433 aa		13.6	□□□□□ -0.23
MRE11-210	ENST00000541157	NUDT16	Q96DE0	195 aa	Known RBP	13.6	□□□□□ -0.23
MRE11-210	ENST00000541157	ADGRL3	Q9HAR2	1447 aa		13.6	□□□□□ -0.23
MRE11-210	ENST00000541157	CABP1	Q9NZU7	370 aa		13.6	□□□□□ -0.23
MRE11-210	ENST00000541157	PRR36	Q9H6K5	1346 aa		13.6	□□□□□ -0.23
MRE11-210	ENST00000541157	ANKAR	Q7Z5J8	1434 aa		13.59	□□□□□ -0.23
MRE11-210	ENST00000541157	RIOK3	O14730	519 aa	Known RBP	13.59	□□□□□ -0.23
MRE11-210	ENST00000541157	FMN2	Q9NZ56	1722 aa		13.59	□□□□□ -0.23
MRE11-210	ENST00000541157	CPSF1	Q10570	1443 aa	Known RBP	13.58	□□□□□ -0.24
MRE11-210	ENST00000541157	CCDC184	Q52MB2	194 aa		13.58	□□□□□ -0.24
MRE11-210	ENST00000541157	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.58	□□□□□ -0.24
MRE11-210	ENST00000541157	MRS2	Q9HD23	443 aa		13.58	□□□□□ -0.24
MRE11-210	ENST00000541157	CGNL1	Q0VF96	1302 aa		13.58	□□□□□ -0.24
MRE11-210	ENST00000541157	BRD4	O60885	1362 aa	Predicted RBP	13.58	□□□□□ -0.24
MRE11-210	ENST00000541157	NSD2	O96028	1365 aa		13.58	□□□□□ -0.24
MRE11-210	ENST00000541157	ITSN1	Q15811	1721 aa		13.57	□□□□□ -0.24
MRE11-210	ENST00000541157	TIE1	P35590	1138 aa		13.56	□□□□□ -0.24
MRE11-210	ENST00000541157	NLRP13	Q86W25	1043 aa		13.56	□□□□□ -0.24
MRE11-210	ENST00000541157	YTHDC1	Q96MU7	727 aa	Known RBP	13.56	□□□□□ -0.24
MRE11-210	ENST00000541157	MON2	Q7Z3U7	1717 aa		13.56	□□□□□ -0.24
MRE11-210	ENST00000541157	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.55	□□□□□ -0.24
MRE11-210	ENST00000541157	STRCP1	A6NGW2	1772 aa		13.55	□□□□□ -0.24
MRE11-210	ENST00000541157	AKAP12	Q02952	1782 aa		13.55	□□□□□ -0.24
MRE11-210	ENST00000541157	EDC4	Q6P2E9	1401 aa	Known RBP	13.55	□□□□□ -0.24
MRE11-210	ENST00000541157	PLEKHG3	A1L390	1219 aa		13.54	□□□□□ -0.24
MRE11-210	ENST00000541157	POTEI	P0CG38	1075 aa		13.54	□□□□□ -0.24
MRE11-210	ENST00000541157	PDAP1	Q13442	181 aa	Known RBP	13.54	□□□□□ -0.24
MRE11-210	ENST00000541157	PPP2R1A	P30153	589 aa		13.53	□□□□□ -0.24
MRE11-210	ENST00000541157	PSEN1	P49768	467 aa		13.53	□□□□□ -0.24
MRE11-210	ENST00000541157	PROSER2	Q86WR7	435 aa	Predicted RBP	13.53	□□□□□ -0.24
MRE11-210	ENST00000541157	TMEM106C	Q9BVX2	250 aa		13.53	□□□□□ -0.24
MRE11-210	ENST00000541157	NCOA3	Q9Y6Q9	1424 aa		13.53	□□□□□ -0.24
MRE11-210	ENST00000541157	ANKRD26	Q9UPS8	1709 aa		13.53	□□□□□ -0.24
MRE11-210	ENST00000541157	KIF20B	Q96Q89	1820 aa		13.53	□□□□□ -0.24
MRE11-210	ENST00000541157	TTLL13P	A6NNM8	815 aa		13.52	□□□□□ -0.25
MRE11-210	ENST00000541157	NRK	Q7Z2Y5	1582 aa		13.52	□□□□□ -0.25
MRE11-210	ENST00000541157	POLR3A	O14802	1390 aa	Predicted RBP	13.51	□□□□□ -0.25
MRE11-210	ENST00000541157	NUTM2F	A1L443	756 aa		13.51	□□□□□ -0.25
MRE11-210	ENST00000541157	ATMIN	O43313	823 aa	Predicted RBP	13.51	□□□□□ -0.25
MRE11-210	ENST00000541157	ASTL	Q6HA08	431 aa	Predicted RBP	13.51	□□□□□ -0.25
MRE11-210	ENST00000541157	MORC1	Q86VD1	984 aa		13.51	□□□□□ -0.25
MRE11-210	ENST00000541157	RBM33	Q96EV2	1170 aa	Known RBP	13.51	□□□□□ -0.25
MRE11-210	ENST00000541157	USP6	P35125	1406 aa		13.5	□□□□□ -0.25
MRE11-210	ENST00000541157	TMEM94	Q12767	1356 aa		13.5	□□□□□ -0.25
MRE11-210	ENST00000541157	C14orf37	Q86TY3	774 aa		13.5	□□□□□ -0.25
MRE11-210	ENST00000541157	DCC	P43146	1447 aa		13.49	□□□□□ -0.25
MRE11-210	ENST00000541157	ACE	P12821	1306 aa		13.49	□□□□□ -0.25
MRE11-210	ENST00000541157	FYB1	O15117	783 aa		13.49	□□□□□ -0.25
MRE11-210	ENST00000541157	PNISR	Q8TF01	805 aa	Known RBP	13.49	□□□□□ -0.25
MRE11-210	ENST00000541157	RGPD8	O14715	1765 aa	Predicted RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms