RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 TNRQ92752 1358 aa11.87□□□□□ -0.51
TTC39C-203ENST00000540918 NEXNQ0ZGT2 675 aa11.87□□□□□ -0.51
TTC39C-203ENST00000540918 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
TTC39C-203ENST00000540918 CFAP43Q8NDM7 1665 aa11.87□□□□□ -0.51
TTC39C-203ENST00000540918 FRAT2O75474 233 aaPredicted RBP11.87□□□□□ -0.51
TTC39C-203ENST00000540918 SSH1Q8WYL5 1049 aa11.87□□□□□ -0.51
TTC39C-203ENST00000540918 SAMD9Q5K651 1589 aa11.87□□□□□ -0.51
TTC39C-203ENST00000540918 F6X3S4 739 aa11.86□□□□□ -0.51
TTC39C-203ENST00000540918 ANXA1P04083 346 aa11.86□□□□□ -0.51
TTC39C-203ENST00000540918 KAT6BQ8WYB5 2073 aa11.86□□□□□ -0.51
TTC39C-203ENST00000540918 ZMYM3Q14202 1370 aa11.86□□□□□ -0.51
TTC39C-203ENST00000540918 KDM6BO15054 1643 aa11.86□□□□□ -0.51
TTC39C-203ENST00000540918 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
TTC39C-203ENST00000540918 YEATS2Q9ULM3 1422 aa11.86□□□□□ -0.51
TTC39C-203ENST00000540918 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
TTC39C-203ENST00000540918 FCHSD2O94868 740 aa11.85□□□□□ -0.51
TTC39C-203ENST00000540918 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
TTC39C-203ENST00000540918 DDX17Q92841 729 aaKnown RBP11.85□□□□□ -0.51
TTC39C-203ENST00000540918 PDZRN3Q9UPQ7 1066 aa11.85□□□□□ -0.51
TTC39C-203ENST00000540918 TNNQ9UQP3 1299 aa11.85□□□□□ -0.51
TTC39C-203ENST00000540918 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
TTC39C-203ENST00000540918 PLEKHO1Q53GL0 409 aaPredicted RBP11.84□□□□□ -0.51
TTC39C-203ENST00000540918 NFE2L2Q16236 605 aa11.84□□□□□ -0.51
TTC39C-203ENST00000540918 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
TTC39C-203ENST00000540918 SIL1Q9H173 461 aa11.84□□□□□ -0.51
TTC39C-203ENST00000540918 TOMM22Q9NS69 142 aa11.84□□□□□ -0.51
TTC39C-203ENST00000540918 ABCC10Q5T3U5 1492 aa11.84□□□□□ -0.51
TTC39C-203ENST00000540918 MCCP23508 829 aa11.84□□□□□ -0.51
TTC39C-203ENST00000540918 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
TTC39C-203ENST00000540918 KRT24Q2M2I5 525 aa11.83□□□□□ -0.52
TTC39C-203ENST00000540918 ATF7IPQ6VMQ6 1270 aa11.83□□□□□ -0.52
TTC39C-203ENST00000540918 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
TTC39C-203ENST00000540918 UBTFL1P0CB47 393 aaPredicted RBP11.83□□□□□ -0.52
TTC39C-203ENST00000540918 TATP17735 454 aaPredicted RBP11.83□□□□□ -0.52
TTC39C-203ENST00000540918 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
TTC39C-203ENST00000540918 DUSP27Q5VZP5 1158 aa11.83□□□□□ -0.52
TTC39C-203ENST00000540918 MAP4K4O95819 1239 aaPredicted RBP11.82□□□□□ -0.52
TTC39C-203ENST00000540918 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
TTC39C-203ENST00000540918 LRRC59Q96AG4 307 aaKnown RBP11.82□□□□□ -0.52
TTC39C-203ENST00000540918 ANO2Q9NQ90 1003 aa11.82□□□□□ -0.52
TTC39C-203ENST00000540918 LTKP29376 864 aa11.81□□□□□ -0.52
TTC39C-203ENST00000540918 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
TTC39C-203ENST00000540918 PHACTR3Q96KR7 559 aa11.81□□□□□ -0.52
TTC39C-203ENST00000540918 RARSP54136 660 aaKnown RBP11.81□□□□□ -0.52
TTC39C-203ENST00000540918 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.81□□□□□ -0.52
TTC39C-203ENST00000540918 UHRF1BP1LA0JNW5 1464 aa11.81□□□□□ -0.52
TTC39C-203ENST00000540918 MBD5Q9P267 1494 aa11.81□□□□□ -0.52
TTC39C-203ENST00000540918 RIMS2Q9UQ26 1411 aa11.81□□□□□ -0.52
TTC39C-203ENST00000540918 BTBD11A6QL63 1104 aa11.81□□□□□ -0.52
TTC39C-203ENST00000540918 CABP4P57796 275 aa11.81□□□□□ -0.52
TTC39C-203ENST00000540918 IL1RAPL2Q9NP60 686 aa11.81□□□□□ -0.52
TTC39C-203ENST00000540918 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.81□□□□□ -0.52
TTC39C-203ENST00000540918 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
TTC39C-203ENST00000540918 WDR63Q8IWG1 891 aa11.8□□□□□ -0.52
TTC39C-203ENST00000540918 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
TTC39C-203ENST00000540918 POLKQ9UBT6 870 aa11.8□□□□□ -0.52
TTC39C-203ENST00000540918 PPP6R1Q9UPN7 881 aa11.8□□□□□ -0.52
TTC39C-203ENST00000540918 CCDC30Q5VVM6 783 aa11.8□□□□□ -0.52
TTC39C-203ENST00000540918 ORAI2Q96SN7 254 aa11.8□□□□□ -0.52
TTC39C-203ENST00000540918 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
TTC39C-203ENST00000540918 IFIT2P09913 472 aaKnown RBP11.8□□□□□ -0.52
TTC39C-203ENST00000540918 DDX58O95786 925 aaKnown RBP11.79□□□□□ -0.52
TTC39C-203ENST00000540918 DEKP35659 375 aaKnown RBP11.79□□□□□ -0.52
TTC39C-203ENST00000540918 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
TTC39C-203ENST00000540918 CHMP4AQ9BY43 222 aa11.79□□□□□ -0.52
TTC39C-203ENST00000540918 EXOC6BQ9Y2D4 811 aa11.79□□□□□ -0.52
TTC39C-203ENST00000540918 DNMT1P26358 1616 aaKnown RBP11.79□□□□□ -0.52
TTC39C-203ENST00000540918 G3BP1Q13283 466 aaKnown RBP eCLIP11.79□□□□□ -0.52
TTC39C-203ENST00000540918 SMG6Q86US8 1419 aaKnown RBP11.78□□□□□ -0.52
TTC39C-203ENST00000540918 TTC21BQ7Z4L5 1316 aa11.78□□□□□ -0.52
TTC39C-203ENST00000540918 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
TTC39C-203ENST00000540918 HSP90B1P14625 803 aaKnown RBP11.78□□□□□ -0.52
TTC39C-203ENST00000540918 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
TTC39C-203ENST00000540918 GNAT3A8MTJ3 354 aa11.78□□□□□ -0.52
TTC39C-203ENST00000540918 MVPQ14764 893 aaKnown RBP11.78□□□□□ -0.52
TTC39C-203ENST00000540918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.77□□□□□ -0.52
TTC39C-203ENST00000540918 GOLGA6L4A6NEF3 574 aa11.77□□□□□ -0.52
TTC39C-203ENST00000540918 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.52
TTC39C-203ENST00000540918 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.53
TTC39C-203ENST00000540918 UGGT1Q9NYU2 1555 aa11.77□□□□□ -0.53
TTC39C-203ENST00000540918 PDE3AQ14432 1141 aa11.77□□□□□ -0.53
TTC39C-203ENST00000540918 DIAPH3Q9NSV4 1193 aa11.77□□□□□ -0.53
TTC39C-203ENST00000540918 TRIM44Q96DX7 344 aaPredicted RBP11.76□□□□□ -0.53
TTC39C-203ENST00000540918 PTMAP06454 111 aaKnown RBP11.76□□□□□ -0.53
TTC39C-203ENST00000540918 SLC39A6Q13433 755 aa11.76□□□□□ -0.53
TTC39C-203ENST00000540918 KLHL34Q8N239 644 aa11.76□□□□□ -0.53
TTC39C-203ENST00000540918 KDM4AO75164 1064 aa11.76□□□□□ -0.53
TTC39C-203ENST00000540918 A0A1W2PP64 1363 aa11.76□□□□□ -0.53
TTC39C-203ENST00000540918 TRIM27P14373 513 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 PPIP5K1Q6PFW1 1433 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 TSPYL6Q8N831 410 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 PLEKHH1Q9ULM0 1364 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 ATP7AQ04656 1500 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 APPP05067 770 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 FOSBP53539 338 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 EIF4A2Q14240 407 aaKnown RBP11.75□□□□□ -0.53
TTC39C-203ENST00000540918 BICDL1Q6ZP65 573 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 NPATQ14207 1427 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 TEX14Q8IWB6 1497 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms