RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 MROH1Q8NDA8 1641 aa11.87□□□□□ -0.51
PHC1-209ENST00000540809 RNF17Q9BXT8 1623 aaKnown RBP11.87□□□□□ -0.51
PHC1-209ENST00000540809 POLR1AO95602 1720 aaPredicted RBP11.87□□□□□ -0.51
PHC1-209ENST00000540809 HSPA1LP34931 641 aa11.87□□□□□ -0.51
PHC1-209ENST00000540809 THSD4Q6ZMP0 1018 aa11.87□□□□□ -0.51
PHC1-209ENST00000540809 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
PHC1-209ENST00000540809 ABCC5O15440 1437 aa11.86□□□□□ -0.51
PHC1-209ENST00000540809 NPHP4O75161 1426 aaPredicted RBP11.86□□□□□ -0.51
PHC1-209ENST00000540809 MED14O60244 1454 aa11.86□□□□□ -0.51
PHC1-209ENST00000540809 VWDEQ8N2E2 1590 aa11.86□□□□□ -0.51
PHC1-209ENST00000540809 SPATA31D1Q6ZQQ2 1576 aa11.85□□□□□ -0.51
PHC1-209ENST00000540809 LTKP29376 864 aa11.85□□□□□ -0.51
PHC1-209ENST00000540809 PROX2Q3B8N5 592 aa11.85□□□□□ -0.51
PHC1-209ENST00000540809 ERVK-7P63135 1459 aa11.84□□□□□ -0.51
PHC1-209ENST00000540809 TOM1O60784 492 aa11.84□□□□□ -0.51
PHC1-209ENST00000540809 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
PHC1-209ENST00000540809 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
PHC1-209ENST00000540809 CHIC2Q9UKJ5 165 aa11.84□□□□□ -0.51
PHC1-209ENST00000540809 CEP152O94986 1710 aa11.83□□□□□ -0.52
PHC1-209ENST00000540809 DEPDC5O75140 1603 aa11.83□□□□□ -0.52
PHC1-209ENST00000540809 KIF15Q9NS87 1388 aa11.83□□□□□ -0.52
PHC1-209ENST00000540809 STRCP1A6NGW2 1772 aa11.83□□□□□ -0.52
PHC1-209ENST00000540809 CPS1P31327 1500 aa11.83□□□□□ -0.52
PHC1-209ENST00000540809 DUOX2Q9NRD8 1548 aa11.83□□□□□ -0.52
PHC1-209ENST00000540809 PTPN5P54829 565 aa11.83□□□□□ -0.52
PHC1-209ENST00000540809 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
PHC1-209ENST00000540809 EIF2AK4Q9P2K8 1649 aaKnown RBP11.82□□□□□ -0.52
PHC1-209ENST00000540809 ALKQ9UM73 1620 aa11.82□□□□□ -0.52
PHC1-209ENST00000540809 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
PHC1-209ENST00000540809 EPAS1Q99814 870 aa11.82□□□□□ -0.52
PHC1-209ENST00000540809 C6orf132Q5T0Z8 1188 aa11.81□□□□□ -0.52
PHC1-209ENST00000540809 TXNDC2Q86VQ3 553 aa11.81□□□□□ -0.52
PHC1-209ENST00000540809 WNT2BQ93097 391 aa11.81□□□□□ -0.52
PHC1-209ENST00000540809 PTPN23Q9H3S7 1636 aa11.81□□□□□ -0.52
PHC1-209ENST00000540809 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
PHC1-209ENST00000540809 DAPK1P53355 1430 aa11.8□□□□□ -0.52
PHC1-209ENST00000540809 NBPF3Q9H094 633 aa11.8□□□□□ -0.52
PHC1-209ENST00000540809 IQGAP1P46940 1657 aa11.8□□□□□ -0.52
PHC1-209ENST00000540809 UBR1Q8IWV7 1749 aa11.8□□□□□ -0.52
PHC1-209ENST00000540809 ARHGAP31Q2M1Z3 1444 aa11.79□□□□□ -0.52
PHC1-209ENST00000540809 FGD6Q6ZV73 1430 aa11.79□□□□□ -0.52
PHC1-209ENST00000540809 IDI1Q13907 227 aa11.79□□□□□ -0.52
PHC1-209ENST00000540809 LRRC7Q96NW7 1537 aa11.79□□□□□ -0.52
PHC1-209ENST00000540809 PDIA6Q15084 440 aa11.78□□□□□ -0.52
PHC1-209ENST00000540809 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
PHC1-209ENST00000540809 ERBINQ96RT1 1412 aa11.77□□□□□ -0.52
PHC1-209ENST00000540809 ARHGAP23Q9P227 1491 aa11.77□□□□□ -0.52
PHC1-209ENST00000540809 DDX12PQ92771 950 aa11.77□□□□□ -0.53
PHC1-209ENST00000540809 CROCC2H7BZ55 1655 aa11.77□□□□□ -0.53
PHC1-209ENST00000540809 SCAF11Q99590 1463 aaKnown RBP11.76□□□□□ -0.53
PHC1-209ENST00000540809 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
PHC1-209ENST00000540809 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
PHC1-209ENST00000540809 KIAA1468Q9P260 1216 aa11.76□□□□□ -0.53
PHC1-209ENST00000540809 SLIT1O75093 1534 aa11.76□□□□□ -0.53
PHC1-209ENST00000540809 GOLGA8CPA6NN73 597 aa11.75□□□□□ -0.53
PHC1-209ENST00000540809 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
PHC1-209ENST00000540809 ANKRD30AQ9BXX3 1397 aa11.75□□□□□ -0.53
PHC1-209ENST00000540809 PIK3C2BO00750 1634 aa11.75□□□□□ -0.53
PHC1-209ENST00000540809 FAM50AQ14320 339 aaKnown RBP11.74□□□□□ -0.53
PHC1-209ENST00000540809 EID1Q9Y6B2 187 aa11.74□□□□□ -0.53
PHC1-209ENST00000540809 KANK1Q14678 1352 aa11.74□□□□□ -0.53
PHC1-209ENST00000540809 TMEM2Q9UHN6 1383 aa11.74□□□□□ -0.53
PHC1-209ENST00000540809 LAPTM4BQ86VI4 370 aa11.73□□□□□ -0.53
PHC1-209ENST00000540809 RBM33Q96EV2 1170 aaKnown RBP11.73□□□□□ -0.53
PHC1-209ENST00000540809 SLC26A8Q96RN1 970 aa11.73□□□□□ -0.53
PHC1-209ENST00000540809 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.73□□□□□ -0.53
PHC1-209ENST00000540809 MED1Q15648 1581 aaPredicted RBP11.72□□□□□ -0.53
PHC1-209ENST00000540809 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
PHC1-209ENST00000540809 XIRP1Q702N8 1843 aaKnown RBP11.72□□□□□ -0.53
PHC1-209ENST00000540809 SYNMO15061 1565 aa11.71□□□□□ -0.53
PHC1-209ENST00000540809 LMTK2Q8IWU2 1503 aa11.71□□□□□ -0.53
PHC1-209ENST00000540809 NOS1P29475 1434 aa11.71□□□□□ -0.53
PHC1-209ENST00000540809 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
PHC1-209ENST00000540809 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.53
PHC1-209ENST00000540809 SPDYE16A6NNV3 312 aaPredicted RBP11.7□□□□□ -0.54
PHC1-209ENST00000540809 KCNA6P17658 529 aa11.7□□□□□ -0.54
PHC1-209ENST00000540809 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
PHC1-209ENST00000540809 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
PHC1-209ENST00000540809 TET3O43151 1660 aa11.7□□□□□ -0.54
PHC1-209ENST00000540809 E2F4Q16254 413 aa11.69□□□□□ -0.54
PHC1-209ENST00000540809 ZFRQ96KR1 1074 aaKnown RBP11.69□□□□□ -0.54
PHC1-209ENST00000540809 ADGRL2O95490 1459 aa11.69□□□□□ -0.54
PHC1-209ENST00000540809 SOWAHBA6NEL2 793 aa11.68□□□□□ -0.54
PHC1-209ENST00000540809 BCAMP50895 628 aa11.68□□□□□ -0.54
PHC1-209ENST00000540809 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
PHC1-209ENST00000540809 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
PHC1-209ENST00000540809 SLC52A1Q9NWF4 448 aa11.68□□□□□ -0.54
PHC1-209ENST00000540809 RGS17Q9UGC6 210 aaPredicted RBP11.68□□□□□ -0.54
PHC1-209ENST00000540809 EFCAB6Q5THR3 1501 aa11.68□□□□□ -0.54
PHC1-209ENST00000540809 TMEM94Q12767 1356 aa11.67□□□□□ -0.54
PHC1-209ENST00000540809 NBR1Q14596 966 aa11.67□□□□□ -0.54
PHC1-209ENST00000540809 PPARGC1BQ86YN6 1023 aaKnown RBP11.67□□□□□ -0.54
PHC1-209ENST00000540809 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
PHC1-209ENST00000540809 SEPT9Q9UHD8 586 aaPredicted RBP11.67□□□□□ -0.54
PHC1-209ENST00000540809 ANKRD50Q9ULJ7 1429 aa11.67□□□□□ -0.54
PHC1-209ENST00000540809 TSKSQ9UJT2 592 aa11.66□□□□□ -0.54
PHC1-209ENST00000540809 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.54
PHC1-209ENST00000540809 BCANQ96GW7 911 aa11.65□□□□□ -0.54
PHC1-209ENST00000540809 FAM135BQ49AJ0 1406 aa11.64□□□□□ -0.55
PHC1-209ENST00000540809 NUTM2DQ5VT03 806 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms