RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ARHGEF10O15013 1369 aa21.45■■□□□ 1.02
DDB1-218ENST00000540784 USP6P35125 1406 aa21.45■■□□□ 1.02
DDB1-218ENST00000540784 TNS3Q68CZ2 1445 aa21.45■■□□□ 1.02
DDB1-218ENST00000540784 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
DDB1-218ENST00000540784 TTC21BQ7Z4L5 1316 aa21.44■■□□□ 1.02
DDB1-218ENST00000540784 A0A1W2PP64 1363 aa21.42■■□□□ 1.02
DDB1-218ENST00000540784 NUTM2GQ5VZR2 741 aa21.42■■□□□ 1.02
DDB1-218ENST00000540784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.42■■□□□ 1.02
DDB1-218ENST00000540784 ANKRD36BQ8N2N9 1353 aa21.42■■□□□ 1.02
DDB1-218ENST00000540784 CD163L1Q9NR16 1453 aa21.42■■□□□ 1.02
DDB1-218ENST00000540784 TTC21AQ8NDW8 1320 aa21.41■■□□□ 1.02
DDB1-218ENST00000540784 HAP1P54257 671 aaPredicted RBP21.41■■□□□ 1.02
DDB1-218ENST00000540784 NLRP13Q86W25 1043 aa21.41■■□□□ 1.02
DDB1-218ENST00000540784 CABLES1Q8TDN4 633 aa21.41■■□□□ 1.02
DDB1-218ENST00000540784 SSH2Q76I76 1423 aa21.4■■□□□ 1.02
DDB1-218ENST00000540784 NLRP6P59044 892 aa21.4■■□□□ 1.02
DDB1-218ENST00000540784 WASHC2AQ641Q2 1341 aa21.39■■□□□ 1.01
DDB1-218ENST00000540784 PANK3Q9H999 370 aa21.39■■□□□ 1.01
DDB1-218ENST00000540784 CCDC7Q96M83 1385 aa21.38■■□□□ 1.01
DDB1-218ENST00000540784 MEX3CQ5U5Q3 659 aaKnown RBP21.38■■□□□ 1.01
DDB1-218ENST00000540784 CARD14Q9BXL6 1004 aa21.38■■□□□ 1.01
DDB1-218ENST00000540784 TRPM3Q9HCF6 1732 aaPredicted RBP21.38■■□□□ 1.01
DDB1-218ENST00000540784 SHPRHQ149N8 1683 aa21.37■■□□□ 1.01
DDB1-218ENST00000540784 ADAMTS2O95450 1211 aa21.37■■□□□ 1.01
DDB1-218ENST00000540784 EDC4Q6P2E9 1401 aaKnown RBP21.37■■□□□ 1.01
DDB1-218ENST00000540784 NME9Q86XW9 330 aa21.35■■□□□ 1.01
DDB1-218ENST00000540784 AKAP12Q02952 1782 aa21.35■■□□□ 1.01
DDB1-218ENST00000540784 ZRANB1Q9UGI0 708 aa21.33■■□□□ 1.01
DDB1-218ENST00000540784 ALS2Q96Q42 1657 aa21.32■■□□□ 1
DDB1-218ENST00000540784 COL22A1Q8NFW1 1626 aaPredicted RBP21.32■■□□□ 1
DDB1-218ENST00000540784 FYB1O15117 783 aa21.31■■□□□ 1
DDB1-218ENST00000540784 GCP02774 474 aa21.31■■□□□ 1
DDB1-218ENST00000540784 NGLY1Q96IV0 654 aa21.31■■□□□ 1
DDB1-218ENST00000540784 C8orf37Q96NL8 207 aa21.3■■□□□ 1
DDB1-218ENST00000540784 MON2Q7Z3U7 1717 aa21.29■■□□□ 1
DDB1-218ENST00000540784 USP31Q70CQ4 1352 aa21.29■■□□□ 1
DDB1-218ENST00000540784 KCNH5Q8NCM2 988 aa21.29■■□□□ 1
DDB1-218ENST00000540784 COG3Q96JB2 828 aa21.29■■□□□ 1
DDB1-218ENST00000540784 KNSTRNQ9Y448 316 aa21.29■■□□□ 1
DDB1-218ENST00000540784 LRP6O75581 1613 aa21.29■■□□□ 1
DDB1-218ENST00000540784 NSD3Q9BZ95 1437 aa21.29■■□□□ 1
DDB1-218ENST00000540784 USP19O94966 1318 aa21.29■■□□□ 1
DDB1-218ENST00000540784 MYOM1P52179 1685 aa21.28■■□□□ 1
DDB1-218ENST00000540784 ZC3H6P61129 1189 aaKnown RBP21.28■■□□□ 1
DDB1-218ENST00000540784 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
DDB1-218ENST00000540784 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
DDB1-218ENST00000540784 GGNBP2Q9H3C7 697 aa21.27■■□□□ 1
DDB1-218ENST00000540784 MED1Q15648 1581 aaPredicted RBP21.27■□□□□ 0.99
DDB1-218ENST00000540784 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
DDB1-218ENST00000540784 SOX12O15370 315 aa21.26■□□□□ 0.99
DDB1-218ENST00000540784 NRKQ7Z2Y5 1582 aa21.25■□□□□ 0.99
DDB1-218ENST00000540784 PRDM11Q9NQV5 511 aa21.24■□□□□ 0.99
DDB1-218ENST00000540784 ZNF316A6NFI3 1004 aaPredicted RBP21.23■□□□□ 0.99
DDB1-218ENST00000540784 PER1O15534 1290 aaPredicted RBP21.23■□□□□ 0.99
DDB1-218ENST00000540784 PIK3C2AO00443 1686 aa21.23■□□□□ 0.99
DDB1-218ENST00000540784 ZBTB7CA1YPR0 619 aa21.22■□□□□ 0.99
DDB1-218ENST00000540784 FNBP4Q8N3X1 1017 aaPredicted RBP21.22■□□□□ 0.99
DDB1-218ENST00000540784 KIAA0232Q92628 1395 aa21.22■□□□□ 0.99
DDB1-218ENST00000540784 CHRNA2Q15822 529 aa21.21■□□□□ 0.99
DDB1-218ENST00000540784 AFF2P51816 1311 aa21.21■□□□□ 0.99
DDB1-218ENST00000540784 ZNF772Q68DY9 489 aaPredicted RBP21.2■□□□□ 0.98
DDB1-218ENST00000540784 USP21Q9UK80 565 aa21.2■□□□□ 0.98
DDB1-218ENST00000540784 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
DDB1-218ENST00000540784 ARHGEF25Q86VW2 580 aa21.19■□□□□ 0.98
DDB1-218ENST00000540784 BTG4Q9NY30 223 aa21.18■□□□□ 0.98
DDB1-218ENST00000540784 RGS17Q9UGC6 210 aaPredicted RBP21.18■□□□□ 0.98
DDB1-218ENST00000540784 CPDO75976 1380 aa21.18■□□□□ 0.98
DDB1-218ENST00000540784 OVOS2A0A0J9YW53 1432 aa21.18■□□□□ 0.98
DDB1-218ENST00000540784 OVOS2Q6IE36 1432 aa21.18■□□□□ 0.98
DDB1-218ENST00000540784 SLIT3O75094 1523 aa21.18■□□□□ 0.98
DDB1-218ENST00000540784 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
DDB1-218ENST00000540784 MORC1Q86VD1 984 aa21.17■□□□□ 0.98
DDB1-218ENST00000540784 FBLN1P23142 703 aa21.16■□□□□ 0.98
DDB1-218ENST00000540784 UNC5CLQ8IV45 518 aa21.16■□□□□ 0.98
DDB1-218ENST00000540784 NSD2O96028 1365 aa21.15■□□□□ 0.98
DDB1-218ENST00000540784 EVA1CP58658 441 aa21.15■□□□□ 0.98
DDB1-218ENST00000540784 QTRT2Q9H974 415 aaKnown RBP21.15■□□□□ 0.98
DDB1-218ENST00000540784 ABCA3Q99758 1704 aa21.15■□□□□ 0.98
DDB1-218ENST00000540784 PHRF1Q9P1Y6 1649 aaKnown RBP21.15■□□□□ 0.98
DDB1-218ENST00000540784 CC2D1BQ5T0F9 858 aaKnown RBP21.14■□□□□ 0.97
DDB1-218ENST00000540784 CRYBG1Q9Y4K1 1723 aa21.14■□□□□ 0.97
DDB1-218ENST00000540784 TNNT2P45379 298 aaPredicted RBP21.13■□□□□ 0.97
DDB1-218ENST00000540784 CNGB1Q14028 1251 aaPredicted RBP21.13■□□□□ 0.97
DDB1-218ENST00000540784 AATKQ6ZMQ8 1374 aa21.12■□□□□ 0.97
DDB1-218ENST00000540784 TRPC5Q9UL62 973 aaPredicted RBP21.12■□□□□ 0.97
DDB1-218ENST00000540784 SLIT2O94813 1529 aa21.11■□□□□ 0.97
DDB1-218ENST00000540784 AMPHP49418 695 aa21.11■□□□□ 0.97
DDB1-218ENST00000540784 STRN4Q9NRL3 753 aa21.11■□□□□ 0.97
DDB1-218ENST00000540784 AXIN2Q9Y2T1 843 aa21.11■□□□□ 0.97
DDB1-218ENST00000540784 MARF1Q9Y4F3 1742 aaKnown RBP21.11■□□□□ 0.97
DDB1-218ENST00000540784 BCL9LQ86UU0 1499 aa21.11■□□□□ 0.97
DDB1-218ENST00000540784 USP54Q70EL1 1684 aa21.1■□□□□ 0.97
DDB1-218ENST00000540784 RRS1Q15050 365 aaKnown RBP21.1■□□□□ 0.97
DDB1-218ENST00000540784 POTEAQ6S8J7 498 aa21.1■□□□□ 0.97
DDB1-218ENST00000540784 NFAT5O94916 1531 aa21.09■□□□□ 0.97
DDB1-218ENST00000540784 MAP3K19Q56UN5 1328 aa21.09■□□□□ 0.97
DDB1-218ENST00000540784 KIF20BQ96Q89 1820 aa21.09■□□□□ 0.97
DDB1-218ENST00000540784 IP6K1Q92551 441 aa21.09■□□□□ 0.97
DDB1-218ENST00000540784 CCDC9Q9Y3X0 531 aaKnown RBP21.09■□□□□ 0.97
DDB1-218ENST00000540784 COL14A1Q05707 1796 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms