RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PRR36Q9H6K5 1346 aa14.8□□□□□ -0.04
CDCA3-208ENST00000540683 TONSLQ96HA7 1378 aa14.8□□□□□ -0.04
CDCA3-208ENST00000540683 RGS12O14924 1447 aa14.8□□□□□ -0.04
CDCA3-208ENST00000540683 TRPM3Q9HCF6 1732 aaPredicted RBP14.8□□□□□ -0.04
CDCA3-208ENST00000540683 POLR3AO14802 1390 aaPredicted RBP14.79□□□□□ -0.04
CDCA3-208ENST00000540683 ALS2Q96Q42 1657 aa14.78□□□□□ -0.04
CDCA3-208ENST00000540683 TRPM1Q7Z4N2 1603 aa14.78□□□□□ -0.04
CDCA3-208ENST00000540683 QRICH2Q9H0J4 1663 aa14.77□□□□□ -0.04
CDCA3-208ENST00000540683 VPS72Q15906 364 aa14.77□□□□□ -0.05
CDCA3-208ENST00000540683 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.05
CDCA3-208ENST00000540683 CCDC9Q9Y3X0 531 aaKnown RBP14.77□□□□□ -0.05
CDCA3-208ENST00000540683 ABCA3Q99758 1704 aa14.77□□□□□ -0.05
CDCA3-208ENST00000540683 TOPAZ1Q8N9V7 1692 aa14.77□□□□□ -0.05
CDCA3-208ENST00000540683 COL14A1Q05707 1796 aaKnown RBP14.76□□□□□ -0.05
CDCA3-208ENST00000540683 ACEP12821 1306 aa14.76□□□□□ -0.05
CDCA3-208ENST00000540683 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
CDCA3-208ENST00000540683 NBPF8Q3BBV2 869 aa14.76□□□□□ -0.05
CDCA3-208ENST00000540683 CABLES1Q8TDN4 633 aa14.75□□□□□ -0.05
CDCA3-208ENST00000540683 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-208ENST00000540683 PPIP5K1Q6PFW1 1433 aa14.75□□□□□ -0.05
CDCA3-208ENST00000540683 PLCH1Q4KWH8 1693 aa14.74□□□□□ -0.05
CDCA3-208ENST00000540683 NLRP13Q86W25 1043 aa14.74□□□□□ -0.05
CDCA3-208ENST00000540683 ABTB2Q8N961 1025 aa14.74□□□□□ -0.05
CDCA3-208ENST00000540683 PRDM11Q9NQV5 511 aa14.74□□□□□ -0.05
CDCA3-208ENST00000540683 RALGAPBQ86X10 1494 aa14.73□□□□□ -0.05
CDCA3-208ENST00000540683 SBNO2Q9Y2G9 1366 aa14.73□□□□□ -0.05
CDCA3-208ENST00000540683 FAM83GA6ND36 823 aa14.72□□□□□ -0.05
CDCA3-208ENST00000540683 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
CDCA3-208ENST00000540683 CARD11Q9BXL7 1154 aa14.72□□□□□ -0.05
CDCA3-208ENST00000540683 BTG4Q9NY30 223 aa14.72□□□□□ -0.05
CDCA3-208ENST00000540683 SF3B2Q13435 895 aaKnown RBP14.71□□□□□ -0.05
CDCA3-208ENST00000540683 CABP2Q9NPB3 220 aa14.71□□□□□ -0.05
CDCA3-208ENST00000540683 ONECUT3O60422 494 aaPredicted RBP14.7□□□□□ -0.06
CDCA3-208ENST00000540683 A0A0G2JS52 829 aa14.69□□□□□ -0.06
CDCA3-208ENST00000540683 MYT1Q01538 1121 aa14.69□□□□□ -0.06
CDCA3-208ENST00000540683 EVA1CP58658 441 aa14.68□□□□□ -0.06
CDCA3-208ENST00000540683 SEPT12Q8IYM1 358 aa14.68□□□□□ -0.06
CDCA3-208ENST00000540683 PUS7Q96PZ0 661 aaKnown RBP14.68□□□□□ -0.06
CDCA3-208ENST00000540683 CABP1Q9NZU7 370 aa14.68□□□□□ -0.06
CDCA3-208ENST00000540683 TIMELESSQ9UNS1 1208 aa14.68□□□□□ -0.06
CDCA3-208ENST00000540683 GLI3P10071 1580 aa14.68□□□□□ -0.06
CDCA3-208ENST00000540683 CLSPNQ9HAW4 1339 aa14.67□□□□□ -0.06
CDCA3-208ENST00000540683 PHRF1Q9P1Y6 1649 aaKnown RBP14.67□□□□□ -0.06
CDCA3-208ENST00000540683 CRYBG1Q9Y4K1 1723 aa14.67□□□□□ -0.06
CDCA3-208ENST00000540683 KRT27Q7Z3Y8 459 aa14.67□□□□□ -0.06
CDCA3-208ENST00000540683 CPDO75976 1380 aa14.67□□□□□ -0.06
CDCA3-208ENST00000540683 USP19O94966 1318 aa14.66□□□□□ -0.06
CDCA3-208ENST00000540683 TTC21AQ8NDW8 1320 aa14.66□□□□□ -0.06
CDCA3-208ENST00000540683 USP6P35125 1406 aa14.66□□□□□ -0.06
CDCA3-208ENST00000540683 KIAA0232Q92628 1395 aa14.66□□□□□ -0.06
CDCA3-208ENST00000540683 C11orf95C9JLR9 678 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-208ENST00000540683 KCNH5Q8NCM2 988 aa14.66□□□□□ -0.06
CDCA3-208ENST00000540683 NRAPQ86VF7 1730 aa14.66□□□□□ -0.06
CDCA3-208ENST00000540683 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-208ENST00000540683 SPATA31A5Q5VU36 1347 aa14.65□□□□□ -0.06
CDCA3-208ENST00000540683 SPATA31A7Q8IWB4 1347 aa14.65□□□□□ -0.06
CDCA3-208ENST00000540683 NINLQ9Y2I6 1382 aa14.64□□□□□ -0.07
CDCA3-208ENST00000540683 GCP02774 474 aa14.64□□□□□ -0.07
CDCA3-208ENST00000540683 NLRP6P59044 892 aa14.64□□□□□ -0.07
CDCA3-208ENST00000540683 ZC3H6P61129 1189 aaKnown RBP14.64□□□□□ -0.07
CDCA3-208ENST00000540683 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
CDCA3-208ENST00000540683 NUTM2GQ5VZR2 741 aa14.63□□□□□ -0.07
CDCA3-208ENST00000540683 TERF2IPQ9NYB0 399 aa14.63□□□□□ -0.07
CDCA3-208ENST00000540683 THRAP3Q9Y2W1 955 aaKnown RBP14.63□□□□□ -0.07
CDCA3-208ENST00000540683 EP400Q96L91 3159 aa14.63□□□□□ -0.07
CDCA3-208ENST00000540683 FAM98CQ17RN3 349 aaKnown RBP14.62□□□□□ -0.07
CDCA3-208ENST00000540683 NRKQ7Z2Y5 1582 aa14.62□□□□□ -0.07
CDCA3-208ENST00000540683 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
CDCA3-208ENST00000540683 KTN1Q86UP2 1357 aaKnown RBP14.61□□□□□ -0.07
CDCA3-208ENST00000540683 CDCA8Q53HL2 280 aa14.61□□□□□ -0.07
CDCA3-208ENST00000540683 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
CDCA3-208ENST00000540683 SPATA31A1Q5TZJ5 1347 aa14.61□□□□□ -0.07
CDCA3-208ENST00000540683 BARGINQ6ZT62 677 aa14.6□□□□□ -0.07
CDCA3-208ENST00000540683 TTC21BQ7Z4L5 1316 aa14.6□□□□□ -0.07
CDCA3-208ENST00000540683 AKAP12Q02952 1782 aa14.6□□□□□ -0.07
CDCA3-208ENST00000540683 AATKQ6ZMQ8 1374 aa14.6□□□□□ -0.07
CDCA3-208ENST00000540683 SSH2Q76I76 1423 aa14.59□□□□□ -0.07
CDCA3-208ENST00000540683 BAG6P46379 1132 aa14.59□□□□□ -0.07
CDCA3-208ENST00000540683 CHRNA2Q15822 529 aa14.59□□□□□ -0.07
CDCA3-208ENST00000540683 TCP11L2Q8N4U5 519 aa14.59□□□□□ -0.07
CDCA3-208ENST00000540683 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
CDCA3-208ENST00000540683 CPSF1Q10570 1443 aaKnown RBP14.58□□□□□ -0.07
CDCA3-208ENST00000540683 SLIT3O75094 1523 aa14.58□□□□□ -0.08
CDCA3-208ENST00000540683 PDE3BQ13370 1112 aa14.58□□□□□ -0.08
CDCA3-208ENST00000540683 TMC1Q8TDI8 760 aa14.58□□□□□ -0.08
CDCA3-208ENST00000540683 CDCA7Q9BWT1 371 aaPredicted RBP14.58□□□□□ -0.08
CDCA3-208ENST00000540683 FAM196AQ6ZSG2 479 aa14.57□□□□□ -0.08
CDCA3-208ENST00000540683 ABCC6O95255 1503 aa14.56□□□□□ -0.08
CDCA3-208ENST00000540683 EDC4Q6P2E9 1401 aaKnown RBP14.56□□□□□ -0.08
CDCA3-208ENST00000540683 PIK3C2AO00443 1686 aa14.55□□□□□ -0.08
CDCA3-208ENST00000540683 LMO7Q8WWI1 1683 aa14.55□□□□□ -0.08
CDCA3-208ENST00000540683 THSD7AQ9UPZ6 1657 aa14.55□□□□□ -0.08
CDCA3-208ENST00000540683 TMF1P82094 1093 aa14.55□□□□□ -0.08
CDCA3-208ENST00000540683 CRB1P82279 1406 aa14.55□□□□□ -0.08
CDCA3-208ENST00000540683 MON2Q7Z3U7 1717 aa14.55□□□□□ -0.08
CDCA3-208ENST00000540683 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
CDCA3-208ENST00000540683 USP35Q9P2H5 1018 aa14.54□□□□□ -0.08
CDCA3-208ENST00000540683 COL5A2P05997 1499 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-208ENST00000540683 CAMTA1Q9Y6Y1 1673 aa14.54□□□□□ -0.08
CDCA3-208ENST00000540683 RGPD1P0DJD0 1748 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms