RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 DDX19BQ9UMR2 479 aa14.14□□□□□ -0.15
CPT1A-206ENST00000540367 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
CPT1A-206ENST00000540367 GLIPR1L2Q4G1C9 344 aa14.14□□□□□ -0.15
CPT1A-206ENST00000540367 SMC5Q8IY18 1101 aa14.14□□□□□ -0.15
CPT1A-206ENST00000540367 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
CPT1A-206ENST00000540367 LMTK2Q8IWU2 1503 aa14.14□□□□□ -0.15
CPT1A-206ENST00000540367 TRIM27P14373 513 aa14.13□□□□□ -0.15
CPT1A-206ENST00000540367 U2AF1L5P0DN76 240 aaPredicted RBP14.13□□□□□ -0.15
CPT1A-206ENST00000540367 DDIT3P35638 169 aa14.13□□□□□ -0.15
CPT1A-206ENST00000540367 U2AF1Q01081 240 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPT1A-206ENST00000540367 TSR2Q969E8 191 aaKnown RBP14.12□□□□□ -0.15
CPT1A-206ENST00000540367 GRPEL1Q9HAV7 217 aa14.12□□□□□ -0.15
CPT1A-206ENST00000540367 YEATS2Q9ULM3 1422 aa14.11□□□□□ -0.15
CPT1A-206ENST00000540367 ANKRD36BQ8N2N9 1353 aa14.11□□□□□ -0.15
CPT1A-206ENST00000540367 RBM25P49756 843 aaKnown RBP14.11□□□□□ -0.15
CPT1A-206ENST00000540367 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
CPT1A-206ENST00000540367 SNX21Q969T3 373 aa14.11□□□□□ -0.15
CPT1A-206ENST00000540367 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
CPT1A-206ENST00000540367 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
CPT1A-206ENST00000540367 NPATQ14207 1427 aa14.11□□□□□ -0.15
CPT1A-206ENST00000540367 EXOSC9Q06265 439 aaKnown RBP14.1□□□□□ -0.15
CPT1A-206ENST00000540367 ATF7IPQ6VMQ6 1270 aa14.1□□□□□ -0.15
CPT1A-206ENST00000540367 ABCC11Q96J66 1382 aa14.1□□□□□ -0.15
CPT1A-206ENST00000540367 FAM69CQ0P6D2 419 aa14.1□□□□□ -0.15
CPT1A-206ENST00000540367 SSH1Q8WYL5 1049 aa14.1□□□□□ -0.15
CPT1A-206ENST00000540367 PUS7Q96PZ0 661 aaKnown RBP14.09□□□□□ -0.15
CPT1A-206ENST00000540367 TULP4Q9NRJ4 1543 aa14.09□□□□□ -0.15
CPT1A-206ENST00000540367 KCNA4P22459 653 aa14.09□□□□□ -0.15
CPT1A-206ENST00000540367 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
CPT1A-206ENST00000540367 GLI2P10070 1586 aa14.08□□□□□ -0.15
CPT1A-206ENST00000540367 ARHGEF28Q8N1W1 1705 aaKnown RBP14.08□□□□□ -0.16
CPT1A-206ENST00000540367 ZBTB40Q9NUA8 1239 aa14.08□□□□□ -0.16
CPT1A-206ENST00000540367 CFAP74Q9C0B2 1584 aa14.08□□□□□ -0.16
CPT1A-206ENST00000540367 IL16Q14005 1332 aa14.08□□□□□ -0.16
CPT1A-206ENST00000540367 PLEKHF1Q96S99 279 aa14.07□□□□□ -0.16
CPT1A-206ENST00000540367 CABP2Q9NPB3 220 aa14.07□□□□□ -0.16
CPT1A-206ENST00000540367 STK26Q9P289 416 aa14.07□□□□□ -0.16
CPT1A-206ENST00000540367 COL3A1P02461 1466 aaPredicted RBP14.07□□□□□ -0.16
CPT1A-206ENST00000540367 TMPOP42166 694 aaKnown RBP14.07□□□□□ -0.16
CPT1A-206ENST00000540367 NUCB1Q02818 461 aa14.07□□□□□ -0.16
CPT1A-206ENST00000540367 TMEM57Q8N5G2 664 aa14.07□□□□□ -0.16
CPT1A-206ENST00000540367 TRIM35Q9UPQ4 493 aa14.07□□□□□ -0.16
CPT1A-206ENST00000540367 TNPO1Q92973 898 aaKnown RBP14.06□□□□□ -0.16
CPT1A-206ENST00000540367 NOB1Q9ULX3 412 aaKnown RBP14.06□□□□□ -0.16
CPT1A-206ENST00000540367 KIF16BQ96L93 1317 aa14.06□□□□□ -0.16
CPT1A-206ENST00000540367 ESPNB1AK53 854 aa14.06□□□□□ -0.16
CPT1A-206ENST00000540367 FBXO31Q5XUX0 539 aaPredicted RBP14.06□□□□□ -0.16
CPT1A-206ENST00000540367 EVC2Q86UK5 1308 aa14.06□□□□□ -0.16
CPT1A-206ENST00000540367 GBP4Q96PP9 640 aa14.05□□□□□ -0.16
CPT1A-206ENST00000540367 PTMSP20962 102 aa14.05□□□□□ -0.16
CPT1A-206ENST00000540367 RAB3GAP1Q15042 981 aa14.05□□□□□ -0.16
CPT1A-206ENST00000540367 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
CPT1A-206ENST00000540367 HSP90AB1P08238 724 aaKnown RBP14.04□□□□□ -0.16
CPT1A-206ENST00000540367 MLECQ14165 292 aa14.04□□□□□ -0.16
CPT1A-206ENST00000540367 SKOR2Q2VWA4 1001 aaPredicted RBP14.04□□□□□ -0.16
CPT1A-206ENST00000540367 MLH3Q9UHC1 1453 aa14.04□□□□□ -0.16
CPT1A-206ENST00000540367 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
CPT1A-206ENST00000540367 IPO8O15397 1037 aaKnown RBP14.04□□□□□ -0.16
CPT1A-206ENST00000540367 ERBB4Q15303 1308 aa14.03□□□□□ -0.16
CPT1A-206ENST00000540367 RPGRIP1LQ68CZ1 1315 aa14.03□□□□□ -0.16
CPT1A-206ENST00000540367 HSP90AA1P07900 732 aaKnown RBP14.03□□□□□ -0.16
CPT1A-206ENST00000540367 BMP2KLQ5H9B9 411 aa14.03□□□□□ -0.16
CPT1A-206ENST00000540367 MED14O60244 1454 aa14.03□□□□□ -0.16
CPT1A-206ENST00000540367 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
CPT1A-206ENST00000540367 FBLN1P23142 703 aa14.03□□□□□ -0.16
CPT1A-206ENST00000540367 CHD1LQ86WJ1 897 aa14.03□□□□□ -0.16
CPT1A-206ENST00000540367 LNPKQ9C0E8 428 aa14.03□□□□□ -0.16
CPT1A-206ENST00000540367 TSPOAP1O95153 1857 aa14.03□□□□□ -0.16
CPT1A-206ENST00000540367 SIGLEC1Q9BZZ2 1709 aa14.02□□□□□ -0.16
CPT1A-206ENST00000540367 IDI1Q13907 227 aa14.02□□□□□ -0.16
CPT1A-206ENST00000540367 RRP9O43818 475 aaKnown RBP14.02□□□□□ -0.17
CPT1A-206ENST00000540367 ALDH1L2Q3SY69 923 aa14.02□□□□□ -0.17
CPT1A-206ENST00000540367 GAS2L3Q86XJ1 694 aa14.02□□□□□ -0.17
CPT1A-206ENST00000540367 KIF2CQ99661 725 aa14.02□□□□□ -0.17
CPT1A-206ENST00000540367 TRIM44Q96DX7 344 aaPredicted RBP14.01□□□□□ -0.17
CPT1A-206ENST00000540367 GGNBP2Q9H3C7 697 aa14.01□□□□□ -0.17
CPT1A-206ENST00000540367 A0A1W2PP64 1363 aa14.01□□□□□ -0.17
CPT1A-206ENST00000540367 DIP2BQ9P265 1576 aa14.01□□□□□ -0.17
CPT1A-206ENST00000540367 PKNOX2Q96KN3 472 aa14.01□□□□□ -0.17
CPT1A-206ENST00000540367 ABCC3O15438 1527 aa14.01□□□□□ -0.17
CPT1A-206ENST00000540367 CAMSAP1Q5T5Y3 1602 aa14□□□□□ -0.17
CPT1A-206ENST00000540367 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
CPT1A-206ENST00000540367 HSP90AA2PQ14568 343 aaPredicted RBP14□□□□□ -0.17
CPT1A-206ENST00000540367 REREQ9P2R6 1566 aa14□□□□□ -0.17
CPT1A-206ENST00000540367 RIPK4P57078 832 aa13.99□□□□□ -0.17
CPT1A-206ENST00000540367 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
CPT1A-206ENST00000540367 K7ELQ4 463 aaPredicted RBP13.99□□□□□ -0.17
CPT1A-206ENST00000540367 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
CPT1A-206ENST00000540367 BRPF1P55201 1214 aaPredicted RBP13.98□□□□□ -0.17
CPT1A-206ENST00000540367 GCC1Q96CN9 775 aa13.98□□□□□ -0.17
CPT1A-206ENST00000540367 PIK3C2BO00750 1634 aa13.98□□□□□ -0.17
CPT1A-206ENST00000540367 PPIP5K1Q6PFW1 1433 aa13.98□□□□□ -0.17
CPT1A-206ENST00000540367 NEXMIFQ5QGS0 1516 aa13.98□□□□□ -0.17
CPT1A-206ENST00000540367 CD2BP2O95400 341 aaKnown RBP13.98□□□□□ -0.17
CPT1A-206ENST00000540367 ZNF428Q96B54 188 aa13.97□□□□□ -0.17
CPT1A-206ENST00000540367 CDC42BPGQ6DT37 1551 aa13.97□□□□□ -0.17
CPT1A-206ENST00000540367 MINK1Q8N4C8 1332 aaPredicted RBP13.97□□□□□ -0.17
CPT1A-206ENST00000540367 IBTKQ9P2D0 1353 aaPredicted RBP13.97□□□□□ -0.17
CPT1A-206ENST00000540367 SRPK2P78362 688 aaKnown RBP13.97□□□□□ -0.17
CPT1A-206ENST00000540367 CLEC17AQ6ZS10 378 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms