RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
USP10-202ENST00000540269 TRIM35Q9UPQ4 493 aa16.05■□□□□ 0.16
USP10-202ENST00000540269 HDGFL2Q7Z4V5 671 aaPredicted RBP16.04■□□□□ 0.16
USP10-202ENST00000540269 ZMYM3Q14202 1370 aa16.04■□□□□ 0.16
USP10-202ENST00000540269 MED14O60244 1454 aa16.04■□□□□ 0.16
USP10-202ENST00000540269 ZBTB47Q9UFB7 747 aaPredicted RBP16.04■□□□□ 0.16
USP10-202ENST00000540269 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
USP10-202ENST00000540269 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
USP10-202ENST00000540269 TXNDC2Q86VQ3 553 aa16.03■□□□□ 0.16
USP10-202ENST00000540269 ZRANB1Q9UGI0 708 aa16.03■□□□□ 0.16
USP10-202ENST00000540269 DLC1Q96QB1 1528 aa16.03■□□□□ 0.16
USP10-202ENST00000540269 C8orf34Q49A92 452 aa16.03■□□□□ 0.16
USP10-202ENST00000540269 PNPLA6Q8IY17 1366 aa16.02■□□□□ 0.15
USP10-202ENST00000540269 NBR1Q14596 966 aa16.02■□□□□ 0.15
USP10-202ENST00000540269 CLUAP1Q96AJ1 413 aa16.02■□□□□ 0.15
USP10-202ENST00000540269 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
USP10-202ENST00000540269 POLKQ9UBT6 870 aa16■□□□□ 0.15
USP10-202ENST00000540269 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
USP10-202ENST00000540269 DIAPH1O60610 1272 aaKnown RBP16■□□□□ 0.15
USP10-202ENST00000540269 PCDHB15Q9Y5E8 787 aa16■□□□□ 0.15
USP10-202ENST00000540269 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
USP10-202ENST00000540269 NME9Q86XW9 330 aa15.99■□□□□ 0.15
USP10-202ENST00000540269 MYH16Q9H6N6 1097 aa15.99■□□□□ 0.15
USP10-202ENST00000540269 WASLO00401 505 aaPredicted RBP15.98■□□□□ 0.15
USP10-202ENST00000540269 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
USP10-202ENST00000540269 EMILIN1Q9Y6C2 1016 aa15.98■□□□□ 0.15
USP10-202ENST00000540269 ATP7BP35670 1465 aa15.97■□□□□ 0.15
USP10-202ENST00000540269 RIPK4P57078 832 aa15.97■□□□□ 0.15
USP10-202ENST00000540269 CPSF1Q10570 1443 aaKnown RBP15.97■□□□□ 0.15
USP10-202ENST00000540269 PPIP5K1Q6PFW1 1433 aa15.97■□□□□ 0.15
USP10-202ENST00000540269 MAPK8IP3Q9UPT6 1336 aa15.96■□□□□ 0.15
USP10-202ENST00000540269 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
USP10-202ENST00000540269 LRRC7Q96NW7 1537 aa15.96■□□□□ 0.15
USP10-202ENST00000540269 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.14
USP10-202ENST00000540269 CPS1P31327 1500 aa15.95■□□□□ 0.14
USP10-202ENST00000540269 NUDT16Q96DE0 195 aaKnown RBP15.95■□□□□ 0.14
USP10-202ENST00000540269 PHACTR3Q96KR7 559 aa15.95■□□□□ 0.14
USP10-202ENST00000540269 TNRQ92752 1358 aa15.95■□□□□ 0.14
USP10-202ENST00000540269 PRR36Q9H6K5 1346 aa15.95■□□□□ 0.14
USP10-202ENST00000540269 RSPH6AQ9H0K4 717 aa15.95■□□□□ 0.14
USP10-202ENST00000540269 HMOX1P09601 288 aa15.94■□□□□ 0.14
USP10-202ENST00000540269 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
USP10-202ENST00000540269 SSH1Q8WYL5 1049 aa15.94■□□□□ 0.14
USP10-202ENST00000540269 MAP2P11137 1827 aaKnown RBP15.94■□□□□ 0.14
USP10-202ENST00000540269 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.93■□□□□ 0.14
USP10-202ENST00000540269 SLC4A3P48751 1232 aa15.93■□□□□ 0.14
USP10-202ENST00000540269 CEBPAP49715 358 aaPredicted RBP15.93■□□□□ 0.14
USP10-202ENST00000540269 ROBO2Q9HCK4 1378 aa15.93■□□□□ 0.14
USP10-202ENST00000540269 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
USP10-202ENST00000540269 THUMPD2Q9BTF0 503 aaKnown RBP15.92■□□□□ 0.14
USP10-202ENST00000540269 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
USP10-202ENST00000540269 LTKP29376 864 aa15.92■□□□□ 0.14
USP10-202ENST00000540269 SMC4Q9NTJ3 1288 aa15.92■□□□□ 0.14
USP10-202ENST00000540269 TMEM2Q9UHN6 1383 aa15.92■□□□□ 0.14
USP10-202ENST00000540269 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
USP10-202ENST00000540269 EDC4Q6P2E9 1401 aaKnown RBP15.92■□□□□ 0.14
USP10-202ENST00000540269 RRS1Q15050 365 aaKnown RBP15.91■□□□□ 0.14
USP10-202ENST00000540269 TRIM27P14373 513 aa15.91■□□□□ 0.14
USP10-202ENST00000540269 UBR1Q8IWV7 1749 aa15.91■□□□□ 0.14
USP10-202ENST00000540269 TECPR2O15040 1411 aa15.91■□□□□ 0.14
USP10-202ENST00000540269 ADAMTS13Q76LX8 1427 aa15.91■□□□□ 0.14
USP10-202ENST00000540269 FCHSD2O94868 740 aa15.91■□□□□ 0.14
USP10-202ENST00000540269 MVPQ14764 893 aaKnown RBP15.9■□□□□ 0.14
USP10-202ENST00000540269 ZKSCAN2Q63HK3 967 aa15.9■□□□□ 0.14
USP10-202ENST00000540269 NUTM2FA1L443 756 aa15.9■□□□□ 0.14
USP10-202ENST00000540269 SEC24BO95487 1268 aa15.9■□□□□ 0.14
USP10-202ENST00000540269 IL13P35225 146 aa15.9■□□□□ 0.14
USP10-202ENST00000540269 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
USP10-202ENST00000540269 DZIP1LQ8IYY4 767 aaKnown RBP15.89■□□□□ 0.13
USP10-202ENST00000540269 IL16Q14005 1332 aa15.89■□□□□ 0.13
USP10-202ENST00000540269 KNDC1Q76NI1 1749 aa15.89■□□□□ 0.13
USP10-202ENST00000540269 NOB1Q9ULX3 412 aaKnown RBP15.88■□□□□ 0.13
USP10-202ENST00000540269 PDZRN3Q9UPQ7 1066 aa15.88■□□□□ 0.13
USP10-202ENST00000540269 USP19O94966 1318 aa15.88■□□□□ 0.13
USP10-202ENST00000540269 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.87■□□□□ 0.13
USP10-202ENST00000540269 CT47B1P0C2W7 299 aaPredicted RBP15.87■□□□□ 0.13
USP10-202ENST00000540269 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
USP10-202ENST00000540269 MON2Q7Z3U7 1717 aa15.87■□□□□ 0.13
USP10-202ENST00000540269 FTSJ3Q8IY81 847 aaKnown RBP15.86■□□□□ 0.13
USP10-202ENST00000540269 SLC26A8Q96RN1 970 aa15.86■□□□□ 0.13
USP10-202ENST00000540269 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
USP10-202ENST00000540269 SIRT1Q96EB6 747 aa15.86■□□□□ 0.13
USP10-202ENST00000540269 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
USP10-202ENST00000540269 ATF7IPQ6VMQ6 1270 aa15.85■□□□□ 0.13
USP10-202ENST00000540269 C3P01024 1663 aa15.85■□□□□ 0.13
USP10-202ENST00000540269 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
USP10-202ENST00000540269 TMEM57Q8N5G2 664 aa15.85■□□□□ 0.13
USP10-202ENST00000540269 CDK12Q9NYV4 1490 aaPredicted RBP15.85■□□□□ 0.13
USP10-202ENST00000540269 COG3Q96JB2 828 aa15.84■□□□□ 0.13
USP10-202ENST00000540269 AKAP12Q02952 1782 aa15.84■□□□□ 0.13
USP10-202ENST00000540269 TSPYL6Q8N831 410 aa15.84■□□□□ 0.13
USP10-202ENST00000540269 AATKQ6ZMQ8 1374 aa15.84■□□□□ 0.13
USP10-202ENST00000540269 EIF5BO60841 1220 aaKnown RBP15.83■□□□□ 0.13
USP10-202ENST00000540269 ITPRIPQ8IWB1 547 aa15.83■□□□□ 0.13
USP10-202ENST00000540269 DEKP35659 375 aaKnown RBP15.83■□□□□ 0.12
USP10-202ENST00000540269 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.12
USP10-202ENST00000540269 FAM83GA6ND36 823 aa15.83■□□□□ 0.12
USP10-202ENST00000540269 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
USP10-202ENST00000540269 AAMPQ13685 434 aa15.82■□□□□ 0.12
USP10-202ENST00000540269 AEBP1Q8IUX7 1158 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms