RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 METP08581 1390 aa11.07□□□□□ -0.64
DDB1-217ENST00000540166 NLRP6P59044 892 aa11.07□□□□□ -0.64
DDB1-217ENST00000540166 NLRP13Q86W25 1043 aa11.06□□□□□ -0.64
DDB1-217ENST00000540166 EVC2Q86UK5 1308 aa11.06□□□□□ -0.64
DDB1-217ENST00000540166 CABLES1Q8TDN4 633 aa11.06□□□□□ -0.64
DDB1-217ENST00000540166 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
DDB1-217ENST00000540166 MED14O60244 1454 aa11.06□□□□□ -0.64
DDB1-217ENST00000540166 MYH16Q9H6N6 1097 aa11.05□□□□□ -0.64
DDB1-217ENST00000540166 TRPM2O94759 1503 aa11.05□□□□□ -0.64
DDB1-217ENST00000540166 CENPJQ9HC77 1338 aaPredicted RBP11.05□□□□□ -0.64
DDB1-217ENST00000540166 PIK3C2BO00750 1634 aa11.05□□□□□ -0.64
DDB1-217ENST00000540166 RALBP1Q15311 655 aa11.05□□□□□ -0.64
DDB1-217ENST00000540166 CDK19Q9BWU1 502 aa11.05□□□□□ -0.64
DDB1-217ENST00000540166 IQGAP1P46940 1657 aa11.05□□□□□ -0.64
DDB1-217ENST00000540166 SIGLEC1Q9BZZ2 1709 aa11.05□□□□□ -0.64
DDB1-217ENST00000540166 RNF17Q9BXT8 1623 aaKnown RBP11.05□□□□□ -0.64
DDB1-217ENST00000540166 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
DDB1-217ENST00000540166 CANXP27824 592 aaKnown RBP11.04□□□□□ -0.64
DDB1-217ENST00000540166 CDCA8Q53HL2 280 aa11.04□□□□□ -0.64
DDB1-217ENST00000540166 PNISRQ8TF01 805 aaKnown RBP11.04□□□□□ -0.64
DDB1-217ENST00000540166 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
DDB1-217ENST00000540166 NKTRP30414 1462 aaKnown RBP11.04□□□□□ -0.64
DDB1-217ENST00000540166 PLIN1O60240 522 aa11.04□□□□□ -0.64
DDB1-217ENST00000540166 LMTK2Q8IWU2 1503 aa11.04□□□□□ -0.64
DDB1-217ENST00000540166 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
DDB1-217ENST00000540166 WDR43Q15061 677 aaKnown RBP eCLIP11.03□□□□□ -0.64
DDB1-217ENST00000540166 CCDC61Q9Y6R9 512 aa11.03□□□□□ -0.64
DDB1-217ENST00000540166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.03□□□□□ -0.64
DDB1-217ENST00000540166 TERF2IPQ9NYB0 399 aa11.03□□□□□ -0.64
DDB1-217ENST00000540166 WASLO00401 505 aaPredicted RBP11.03□□□□□ -0.64
DDB1-217ENST00000540166 MYBBP1AQ9BQG0 1328 aaKnown RBP11.03□□□□□ -0.64
DDB1-217ENST00000540166 TET3O43151 1660 aa11.03□□□□□ -0.64
DDB1-217ENST00000540166 CABP2Q9NPB3 220 aa11.02□□□□□ -0.65
DDB1-217ENST00000540166 TNNT2P45379 298 aaPredicted RBP11.02□□□□□ -0.65
DDB1-217ENST00000540166 TOM1L2Q6ZVM7 507 aa11.02□□□□□ -0.65
DDB1-217ENST00000540166 CRBNQ96SW2 442 aa11.02□□□□□ -0.65
DDB1-217ENST00000540166 ARHGAP23Q9P227 1491 aa11.02□□□□□ -0.65
DDB1-217ENST00000540166 SLIT1O75093 1534 aa11.02□□□□□ -0.65
DDB1-217ENST00000540166 BAG6P46379 1132 aa11.01□□□□□ -0.65
DDB1-217ENST00000540166 POTEAQ6S8J7 498 aa11.01□□□□□ -0.65
DDB1-217ENST00000540166 RRAGDQ9NQL2 400 aaPredicted RBP11.01□□□□□ -0.65
DDB1-217ENST00000540166 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
DDB1-217ENST00000540166 KTN1Q86UP2 1357 aaKnown RBP11.01□□□□□ -0.65
DDB1-217ENST00000540166 LTV1Q96GA3 475 aaPredicted RBP11□□□□□ -0.65
DDB1-217ENST00000540166 CENPQQ7L2Z9 268 aaPredicted RBP11□□□□□ -0.65
DDB1-217ENST00000540166 SPRYD3Q8NCJ5 442 aa11□□□□□ -0.65
DDB1-217ENST00000540166 BTG4Q9NY30 223 aa11□□□□□ -0.65
DDB1-217ENST00000540166 LTBP4Q8N2S1 1624 aa11□□□□□ -0.65
DDB1-217ENST00000540166 ADGRL3Q9HAR2 1447 aa11□□□□□ -0.65
DDB1-217ENST00000540166 SKAP1Q86WV1 359 aa10.99□□□□□ -0.65
DDB1-217ENST00000540166 PPP1R1BQ9UD71 204 aaPredicted RBP10.99□□□□□ -0.65
DDB1-217ENST00000540166 STRCQ7RTU9 1775 aa10.99□□□□□ -0.65
DDB1-217ENST00000540166 CHRNA2Q15822 529 aa10.99□□□□□ -0.65
DDB1-217ENST00000540166 AMPHP49418 695 aa10.99□□□□□ -0.65
DDB1-217ENST00000540166 CDCA7LQ96GN5 454 aa10.99□□□□□ -0.65
DDB1-217ENST00000540166 NLRP2Q9NX02 1062 aa10.99□□□□□ -0.65
DDB1-217ENST00000540166 ARID3AQ99856 593 aa10.98□□□□□ -0.65
DDB1-217ENST00000540166 ROBO2Q9HCK4 1378 aa10.98□□□□□ -0.65
DDB1-217ENST00000540166 YTHDC2Q9H6S0 1430 aaKnown RBP10.98□□□□□ -0.65
DDB1-217ENST00000540166 MSNP26038 577 aaKnown RBP10.98□□□□□ -0.65
DDB1-217ENST00000540166 ARHGEF10O15013 1369 aa10.98□□□□□ -0.65
DDB1-217ENST00000540166 TMF1P82094 1093 aa10.97□□□□□ -0.65
DDB1-217ENST00000540166 FAM98CQ17RN3 349 aaKnown RBP10.97□□□□□ -0.65
DDB1-217ENST00000540166 ABCC11Q96J66 1382 aa10.97□□□□□ -0.65
DDB1-217ENST00000540166 TPM2P07951 284 aa10.97□□□□□ -0.65
DDB1-217ENST00000540166 CABP1Q9NZU7 370 aa10.97□□□□□ -0.65
DDB1-217ENST00000540166 ADAMTS13Q76LX8 1427 aa10.97□□□□□ -0.65
DDB1-217ENST00000540166 UNC5CLQ8IV45 518 aa10.96□□□□□ -0.65
DDB1-217ENST00000540166 CROCC2H7BZ55 1655 aa10.96□□□□□ -0.65
DDB1-217ENST00000540166 ZNF142P52746 1687 aaPredicted RBP10.96□□□□□ -0.65
DDB1-217ENST00000540166 CLCN1P35523 988 aa10.96□□□□□ -0.65
DDB1-217ENST00000540166 NBPF14Q5TI25 921 aa10.96□□□□□ -0.65
DDB1-217ENST00000540166 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
DDB1-217ENST00000540166 KNSTRNQ9Y448 316 aa10.96□□□□□ -0.65
DDB1-217ENST00000540166 ZFYVE9O95405 1425 aa10.96□□□□□ -0.66
DDB1-217ENST00000540166 DEPDC5O75140 1603 aa10.96□□□□□ -0.66
DDB1-217ENST00000540166 KLHL34Q8N239 644 aa10.96□□□□□ -0.66
DDB1-217ENST00000540166 POLR1AO95602 1720 aaPredicted RBP10.96□□□□□ -0.66
DDB1-217ENST00000540166 NCLP19338 710 aaKnown RBP10.95□□□□□ -0.66
DDB1-217ENST00000540166 NBPF1Q3BBV0 1214 aa10.95□□□□□ -0.66
DDB1-217ENST00000540166 SYTL4Q96C24 671 aaPredicted RBP10.95□□□□□ -0.66
DDB1-217ENST00000540166 RNF123Q5XPI4 1314 aa10.95□□□□□ -0.66
DDB1-217ENST00000540166 BRD4O60885 1362 aaPredicted RBP10.95□□□□□ -0.66
DDB1-217ENST00000540166 MRE11P49959 708 aa10.94□□□□□ -0.66
DDB1-217ENST00000540166 SIRT1Q96EB6 747 aa10.94□□□□□ -0.66
DDB1-217ENST00000540166 ESPNB1AK53 854 aa10.94□□□□□ -0.66
DDB1-217ENST00000540166 GJD4Q96KN9 370 aaPredicted RBP10.94□□□□□ -0.66
DDB1-217ENST00000540166 PDCL3Q9H2J4 239 aa10.94□□□□□ -0.66
DDB1-217ENST00000540166 KRT27Q7Z3Y8 459 aa10.94□□□□□ -0.66
DDB1-217ENST00000540166 SEPT12Q8IYM1 358 aa10.94□□□□□ -0.66
DDB1-217ENST00000540166 UBR1Q8IWV7 1749 aa10.94□□□□□ -0.66
DDB1-217ENST00000540166 ACEP12821 1306 aa10.93□□□□□ -0.66
DDB1-217ENST00000540166 C1orf167Q5SNV9 1468 aa10.93□□□□□ -0.66
DDB1-217ENST00000540166 COG3Q96JB2 828 aa10.93□□□□□ -0.66
DDB1-217ENST00000540166 FAM13BQ9NYF5 915 aa10.93□□□□□ -0.66
DDB1-217ENST00000540166 SYNMO15061 1565 aa10.93□□□□□ -0.66
DDB1-217ENST00000540166 KCNH5Q8NCM2 988 aa10.93□□□□□ -0.66
DDB1-217ENST00000540166 PANK3Q9H999 370 aa10.93□□□□□ -0.66
DDB1-217ENST00000540166 ATAD2Q6PL18 1390 aa10.93□□□□□ -0.66
DDB1-217ENST00000540166 DCCP43146 1447 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms