RNA–Protein interactions for RNA: ENST00000540121.5

PRKAB1-205, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 5 BASIC

Gene PRKAB1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-205ENST00000540121 SRPK2P78362 688 aaKnown RBP17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 PLEKHF1Q96S99 279 aa17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 ATP7BP35670 1465 aa17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 NLRP1Q9C000 1473 aa17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 CFAP65Q6ZU64 1925 aaKnown RBP17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 FYB1O15117 783 aa17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 MAPK8IP2Q13387 824 aaPredicted RBP17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 POGKQ9P215 609 aa17.42■□□□□ 0.38
PRKAB1-205ENST00000540121 CD163L1Q9NR16 1453 aa17.41■□□□□ 0.38
PRKAB1-205ENST00000540121 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
PRKAB1-205ENST00000540121 CDC42BPGQ6DT37 1551 aa17.41■□□□□ 0.38
PRKAB1-205ENST00000540121 FCHSD2O94868 740 aa17.4■□□□□ 0.38
PRKAB1-205ENST00000540121 HDGFP51858 240 aaKnown RBP17.4■□□□□ 0.38
PRKAB1-205ENST00000540121 PRAM1Q96QH2 718 aa17.39■□□□□ 0.37
PRKAB1-205ENST00000540121 ESF1Q9H501 851 aaKnown RBP17.39■□□□□ 0.37
PRKAB1-205ENST00000540121 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
PRKAB1-205ENST00000540121 BRPF1P55201 1214 aaPredicted RBP17.39■□□□□ 0.37
PRKAB1-205ENST00000540121 RWDD1Q9H446 243 aaPredicted RBP17.39■□□□□ 0.37
PRKAB1-205ENST00000540121 A2ML1A8K2U0 1454 aa17.38■□□□□ 0.37
PRKAB1-205ENST00000540121 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
PRKAB1-205ENST00000540121 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
PRKAB1-205ENST00000540121 ZKSCAN2Q63HK3 967 aa17.36■□□□□ 0.37
PRKAB1-205ENST00000540121 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
PRKAB1-205ENST00000540121 CDK19Q9BWU1 502 aa17.36■□□□□ 0.37
PRKAB1-205ENST00000540121 DAXXQ9UER7 740 aaPredicted RBP17.36■□□□□ 0.37
PRKAB1-205ENST00000540121 DIAPH1O60610 1272 aaKnown RBP17.36■□□□□ 0.37
PRKAB1-205ENST00000540121 IGHDP01880 384 aa17.36■□□□□ 0.37
PRKAB1-205ENST00000540121 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
PRKAB1-205ENST00000540121 FAM135BQ49AJ0 1406 aa17.35■□□□□ 0.37
PRKAB1-205ENST00000540121 DEKP35659 375 aaKnown RBP17.35■□□□□ 0.37
PRKAB1-205ENST00000540121 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
PRKAB1-205ENST00000540121 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
PRKAB1-205ENST00000540121 MVPQ14764 893 aaKnown RBP17.34■□□□□ 0.37
PRKAB1-205ENST00000540121 ALDH1L2Q3SY69 923 aa17.34■□□□□ 0.37
PRKAB1-205ENST00000540121 PPIP5K1Q6PFW1 1433 aa17.34■□□□□ 0.37
PRKAB1-205ENST00000540121 COG6Q9Y2V7 657 aa17.34■□□□□ 0.37
PRKAB1-205ENST00000540121 AATKQ6ZMQ8 1374 aa17.34■□□□□ 0.37
PRKAB1-205ENST00000540121 IPO8O15397 1037 aaKnown RBP17.33■□□□□ 0.37
PRKAB1-205ENST00000540121 STK26Q9P289 416 aa17.33■□□□□ 0.37
PRKAB1-205ENST00000540121 TECPR2O15040 1411 aa17.33■□□□□ 0.36
PRKAB1-205ENST00000540121 RIMS2Q9UQ26 1411 aa17.33■□□□□ 0.36
PRKAB1-205ENST00000540121 MYO5BQ9ULV0 1848 aa17.33■□□□□ 0.36
PRKAB1-205ENST00000540121 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
PRKAB1-205ENST00000540121 PANK1Q8TE04 598 aa17.32■□□□□ 0.36
PRKAB1-205ENST00000540121 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
PRKAB1-205ENST00000540121 CPSF1Q10570 1443 aaKnown RBP17.32■□□□□ 0.36
PRKAB1-205ENST00000540121 NEFMP07197 916 aa17.32■□□□□ 0.36
PRKAB1-205ENST00000540121 NUTM2DQ5VT03 806 aaPredicted RBP17.32■□□□□ 0.36
PRKAB1-205ENST00000540121 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
PRKAB1-205ENST00000540121 DDX19BQ9UMR2 479 aa17.32■□□□□ 0.36
PRKAB1-205ENST00000540121 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
PRKAB1-205ENST00000540121 HDAC1Q13547 482 aaPredicted RBP17.31■□□□□ 0.36
PRKAB1-205ENST00000540121 FBXO31Q5XUX0 539 aaPredicted RBP17.31■□□□□ 0.36
PRKAB1-205ENST00000540121 FRAT1Q92837 279 aaPredicted RBP17.31■□□□□ 0.36
PRKAB1-205ENST00000540121 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
PRKAB1-205ENST00000540121 MINK1Q8N4C8 1332 aaPredicted RBP17.31■□□□□ 0.36
PRKAB1-205ENST00000540121 KIF16BQ96L93 1317 aa17.31■□□□□ 0.36
PRKAB1-205ENST00000540121 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
PRKAB1-205ENST00000540121 GGNBP2Q9H3C7 697 aa17.3■□□□□ 0.36
PRKAB1-205ENST00000540121 NBR1Q14596 966 aa17.29■□□□□ 0.36
PRKAB1-205ENST00000540121 ZNF142P52746 1687 aaPredicted RBP17.29■□□□□ 0.36
PRKAB1-205ENST00000540121 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
PRKAB1-205ENST00000540121 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
PRKAB1-205ENST00000540121 ZNF335Q9H4Z2 1342 aaPredicted RBP17.29■□□□□ 0.36
PRKAB1-205ENST00000540121 SETD1AO15047 1707 aaKnown RBP17.28■□□□□ 0.36
PRKAB1-205ENST00000540121 RGS3P49796 1198 aa17.28■□□□□ 0.36
PRKAB1-205ENST00000540121 ARHGAP45Q92619 1136 aa17.28■□□□□ 0.36
PRKAB1-205ENST00000540121 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
PRKAB1-205ENST00000540121 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
PRKAB1-205ENST00000540121 NCKAP5LQ9HCH0 1330 aa17.27■□□□□ 0.36
PRKAB1-205ENST00000540121 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
PRKAB1-205ENST00000540121 ATF7IPQ6VMQ6 1270 aa17.27■□□□□ 0.36
PRKAB1-205ENST00000540121 WASLO00401 505 aaPredicted RBP17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 RIPK4P57078 832 aa17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 FTSJ3Q8IY81 847 aaKnown RBP17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 RLBP1P12271 317 aa17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 SAFB2Q14151 953 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 BECN1Q14457 450 aa17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 KNDC1Q76NI1 1749 aa17.26■□□□□ 0.35
PRKAB1-205ENST00000540121 CDK12Q9NYV4 1490 aaPredicted RBP17.25■□□□□ 0.35
PRKAB1-205ENST00000540121 EXOSC9Q06265 439 aaKnown RBP17.25■□□□□ 0.35
PRKAB1-205ENST00000540121 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
PRKAB1-205ENST00000540121 POLKQ9UBT6 870 aa17.25■□□□□ 0.35
PRKAB1-205ENST00000540121 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
PRKAB1-205ENST00000540121 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
PRKAB1-205ENST00000540121 CCDC61Q9Y6R9 512 aa17.23■□□□□ 0.35
PRKAB1-205ENST00000540121 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
PRKAB1-205ENST00000540121 SKAP1Q86WV1 359 aa17.23■□□□□ 0.35
PRKAB1-205ENST00000540121 MED1Q15648 1581 aaPredicted RBP17.22■□□□□ 0.35
PRKAB1-205ENST00000540121 USP19O94966 1318 aa17.22■□□□□ 0.35
PRKAB1-205ENST00000540121 TRIM27P14373 513 aa17.22■□□□□ 0.35
PRKAB1-205ENST00000540121 HAP1P54257 671 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms