RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 NUCB1Q02818 461 aa17.48■□□□□ 0.39
SCNN1A-215ENST00000540037 NCOA3Q9Y6Q9 1424 aa17.48■□□□□ 0.39
SCNN1A-215ENST00000540037 ESPNB1AK53 854 aa17.47■□□□□ 0.39
SCNN1A-215ENST00000540037 RIPK4P57078 832 aa17.47■□□□□ 0.39
SCNN1A-215ENST00000540037 FANCAO15360 1455 aa17.47■□□□□ 0.39
SCNN1A-215ENST00000540037 PPRC1Q5VV67 1664 aaKnown RBP17.47■□□□□ 0.39
SCNN1A-215ENST00000540037 ADGRB2O60241 1585 aa17.46■□□□□ 0.39
SCNN1A-215ENST00000540037 CHD1LQ86WJ1 897 aa17.46■□□□□ 0.39
SCNN1A-215ENST00000540037 EFCAB6Q5THR3 1501 aa17.46■□□□□ 0.39
SCNN1A-215ENST00000540037 ZC3H13Q5T200 1668 aaKnown RBP17.46■□□□□ 0.39
SCNN1A-215ENST00000540037 ADGRB1O14514 1584 aa17.46■□□□□ 0.38
SCNN1A-215ENST00000540037 INO80Q9ULG1 1556 aaPredicted RBP17.46■□□□□ 0.38
SCNN1A-215ENST00000540037 ANKRD45Q5TZF3 282 aa17.45■□□□□ 0.38
SCNN1A-215ENST00000540037 GGT6Q6P531 493 aa17.45■□□□□ 0.38
SCNN1A-215ENST00000540037 NEURL4Q96JN8 1562 aa17.44■□□□□ 0.38
SCNN1A-215ENST00000540037 HSP90AA1P07900 732 aaKnown RBP17.44■□□□□ 0.38
SCNN1A-215ENST00000540037 FBLN1P23142 703 aa17.44■□□□□ 0.38
SCNN1A-215ENST00000540037 SNX21Q969T3 373 aa17.44■□□□□ 0.38
SCNN1A-215ENST00000540037 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
SCNN1A-215ENST00000540037 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
SCNN1A-215ENST00000540037 RAB3GAP1Q15042 981 aa17.43■□□□□ 0.38
SCNN1A-215ENST00000540037 STK26Q9P289 416 aa17.43■□□□□ 0.38
SCNN1A-215ENST00000540037 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
SCNN1A-215ENST00000540037 TULP4Q9NRJ4 1543 aa17.43■□□□□ 0.38
SCNN1A-215ENST00000540037 SSFA2P28290 1259 aa17.42■□□□□ 0.38
SCNN1A-215ENST00000540037 ADGRL1O94910 1474 aa17.42■□□□□ 0.38
SCNN1A-215ENST00000540037 ADGRB3O60242 1522 aa17.42■□□□□ 0.38
SCNN1A-215ENST00000540037 SETBP1Q9Y6X0 1596 aa17.42■□□□□ 0.38
SCNN1A-215ENST00000540037 A0A1W2PP64 1363 aa17.42■□□□□ 0.38
SCNN1A-215ENST00000540037 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
SCNN1A-215ENST00000540037 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
SCNN1A-215ENST00000540037 TRIM44Q96DX7 344 aaPredicted RBP17.41■□□□□ 0.38
SCNN1A-215ENST00000540037 ELL2O00472 640 aaPredicted RBP17.41■□□□□ 0.38
SCNN1A-215ENST00000540037 GAS2L2Q8NHY3 880 aa17.41■□□□□ 0.38
SCNN1A-215ENST00000540037 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
SCNN1A-215ENST00000540037 USP32Q8NFA0 1604 aa17.4■□□□□ 0.38
SCNN1A-215ENST00000540037 SRPK2P78362 688 aaKnown RBP17.4■□□□□ 0.38
SCNN1A-215ENST00000540037 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
SCNN1A-215ENST00000540037 NPATQ14207 1427 aa17.39■□□□□ 0.37
SCNN1A-215ENST00000540037 PPIP5K1Q6PFW1 1433 aa17.39■□□□□ 0.37
SCNN1A-215ENST00000540037 BMP2KLQ5H9B9 411 aa17.39■□□□□ 0.37
SCNN1A-215ENST00000540037 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
SCNN1A-215ENST00000540037 KIF16BQ96L93 1317 aa17.38■□□□□ 0.37
SCNN1A-215ENST00000540037 FYB1O15117 783 aa17.38■□□□□ 0.37
SCNN1A-215ENST00000540037 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
SCNN1A-215ENST00000540037 AK9Q5TCS8 1911 aa17.38■□□□□ 0.37
SCNN1A-215ENST00000540037 IPO8O15397 1037 aaKnown RBP17.38■□□□□ 0.37
SCNN1A-215ENST00000540037 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
SCNN1A-215ENST00000540037 TSPYL6Q8N831 410 aa17.38■□□□□ 0.37
SCNN1A-215ENST00000540037 PPLO60437 1756 aa17.38■□□□□ 0.37
SCNN1A-215ENST00000540037 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
SCNN1A-215ENST00000540037 K7ELQ4 463 aaPredicted RBP17.37■□□□□ 0.37
SCNN1A-215ENST00000540037 ZBTB7BO15156 539 aaPredicted RBP17.37■□□□□ 0.37
SCNN1A-215ENST00000540037 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
SCNN1A-215ENST00000540037 GLI2P10070 1586 aa17.36■□□□□ 0.37
SCNN1A-215ENST00000540037 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
SCNN1A-215ENST00000540037 NSD2O96028 1365 aa17.36■□□□□ 0.37
SCNN1A-215ENST00000540037 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
SCNN1A-215ENST00000540037 MINK1Q8N4C8 1332 aaPredicted RBP17.35■□□□□ 0.37
SCNN1A-215ENST00000540037 ATAD2Q6PL18 1390 aa17.35■□□□□ 0.37
SCNN1A-215ENST00000540037 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
SCNN1A-215ENST00000540037 ABCA9Q8IUA7 1624 aa17.35■□□□□ 0.37
SCNN1A-215ENST00000540037 ARAP3Q8WWN8 1544 aa17.34■□□□□ 0.37
SCNN1A-215ENST00000540037 IL16Q14005 1332 aa17.34■□□□□ 0.37
SCNN1A-215ENST00000540037 HMOX1P09601 288 aa17.34■□□□□ 0.37
SCNN1A-215ENST00000540037 ISY1Q9ULR0 285 aaKnown RBP17.34■□□□□ 0.37
SCNN1A-215ENST00000540037 KIDINS220Q9ULH0 1771 aa17.33■□□□□ 0.37
SCNN1A-215ENST00000540037 PRKAR2BP31323 418 aa17.33■□□□□ 0.37
SCNN1A-215ENST00000540037 PKP1Q13835 747 aa17.33■□□□□ 0.37
SCNN1A-215ENST00000540037 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.37
SCNN1A-215ENST00000540037 DDX49Q9Y6V7 483 aaKnown RBP17.33■□□□□ 0.36
SCNN1A-215ENST00000540037 RRP9O43818 475 aaKnown RBP17.32■□□□□ 0.36
SCNN1A-215ENST00000540037 NASPP49321 788 aaPredicted RBP17.32■□□□□ 0.36
SCNN1A-215ENST00000540037 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
SCNN1A-215ENST00000540037 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
SCNN1A-215ENST00000540037 SKOR2Q2VWA4 1001 aaPredicted RBP17.32■□□□□ 0.36
SCNN1A-215ENST00000540037 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
SCNN1A-215ENST00000540037 ARHGEF28Q8N1W1 1705 aaKnown RBP17.32■□□□□ 0.36
SCNN1A-215ENST00000540037 BAG4O95429 457 aaKnown RBP17.31■□□□□ 0.36
SCNN1A-215ENST00000540037 ZMYND15Q9H091 742 aa17.31■□□□□ 0.36
SCNN1A-215ENST00000540037 VAMP4O75379 141 aa17.31■□□□□ 0.36
SCNN1A-215ENST00000540037 C16orf71Q8IYS4 520 aaPredicted RBP17.31■□□□□ 0.36
SCNN1A-215ENST00000540037 MRPL50Q8N5N7 158 aaKnown RBP17.31■□□□□ 0.36
SCNN1A-215ENST00000540037 CHAMP1Q96JM3 812 aa17.31■□□□□ 0.36
SCNN1A-215ENST00000540037 CAMSAP1Q5T5Y3 1602 aa17.31■□□□□ 0.36
SCNN1A-215ENST00000540037 NCLP19338 710 aaKnown RBP17.3■□□□□ 0.36
SCNN1A-215ENST00000540037 MCTP1Q6DN14 999 aa17.3■□□□□ 0.36
SCNN1A-215ENST00000540037 GLIPR1L2Q4G1C9 344 aa17.29■□□□□ 0.36
SCNN1A-215ENST00000540037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCNN1A-215ENST00000540037 GCC1Q96CN9 775 aa17.29■□□□□ 0.36
SCNN1A-215ENST00000540037 KIAA1211Q6ZU35 1233 aa17.29■□□□□ 0.36
SCNN1A-215ENST00000540037 PKNOX2Q96KN3 472 aa17.29■□□□□ 0.36
SCNN1A-215ENST00000540037 MED14O60244 1454 aa17.28■□□□□ 0.36
SCNN1A-215ENST00000540037 LMTK2Q8IWU2 1503 aa17.28■□□□□ 0.36
SCNN1A-215ENST00000540037 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
SCNN1A-215ENST00000540037 PRAM1Q96QH2 718 aa17.28■□□□□ 0.36
SCNN1A-215ENST00000540037 CAVIN1Q6NZI2 390 aaKnown RBP17.27■□□□□ 0.36
SCNN1A-215ENST00000540037 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.36
SCNN1A-215ENST00000540037 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.35
SCNN1A-215ENST00000540037 LRRC7Q96NW7 1537 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms