RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 BRD4O60885 1362 aaPredicted RBP18.78■□□□□ 0.6
PRPF19-204ENST00000539960 ABTB2Q8N961 1025 aa18.77■□□□□ 0.6
PRPF19-204ENST00000539960 NGLY1Q96IV0 654 aa18.77■□□□□ 0.6
PRPF19-204ENST00000539960 C8orf37Q96NL8 207 aa18.77■□□□□ 0.6
PRPF19-204ENST00000539960 COL22A1Q8NFW1 1626 aaPredicted RBP18.77■□□□□ 0.6
PRPF19-204ENST00000539960 HAP1P54257 671 aaPredicted RBP18.76■□□□□ 0.59
PRPF19-204ENST00000539960 USP6P35125 1406 aa18.75■□□□□ 0.59
PRPF19-204ENST00000539960 CPSF1Q10570 1443 aaKnown RBP18.75■□□□□ 0.59
PRPF19-204ENST00000539960 TRPM3Q9HCF6 1732 aaPredicted RBP18.75■□□□□ 0.59
PRPF19-204ENST00000539960 NUTM2GQ5VZR2 741 aa18.75■□□□□ 0.59
PRPF19-204ENST00000539960 HDGFL2Q7Z4V5 671 aaPredicted RBP18.75■□□□□ 0.59
PRPF19-204ENST00000539960 TERF2IPQ9NYB0 399 aa18.75■□□□□ 0.59
PRPF19-204ENST00000539960 SSH2Q76I76 1423 aa18.74■□□□□ 0.59
PRPF19-204ENST00000539960 KTN1Q86UP2 1357 aaKnown RBP18.73■□□□□ 0.59
PRPF19-204ENST00000539960 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
PRPF19-204ENST00000539960 AFF2P51816 1311 aa18.73■□□□□ 0.59
PRPF19-204ENST00000539960 TTC21BQ7Z4L5 1316 aa18.73■□□□□ 0.59
PRPF19-204ENST00000539960 NINLQ9Y2I6 1382 aa18.72■□□□□ 0.59
PRPF19-204ENST00000539960 NLRP13Q86W25 1043 aa18.72■□□□□ 0.59
PRPF19-204ENST00000539960 ALS2Q96Q42 1657 aa18.71■□□□□ 0.59
PRPF19-204ENST00000539960 POTEAQ6S8J7 498 aa18.71■□□□□ 0.59
PRPF19-204ENST00000539960 FNBP4Q8N3X1 1017 aaPredicted RBP18.71■□□□□ 0.59
PRPF19-204ENST00000539960 NLRP6P59044 892 aa18.7■□□□□ 0.58
PRPF19-204ENST00000539960 ILDR2Q71H61 639 aa18.7■□□□□ 0.58
PRPF19-204ENST00000539960 CD163L1Q9NR16 1453 aa18.7■□□□□ 0.58
PRPF19-204ENST00000539960 TTC21AQ8NDW8 1320 aa18.7■□□□□ 0.58
PRPF19-204ENST00000539960 FAM83GA6ND36 823 aa18.69■□□□□ 0.58
PRPF19-204ENST00000539960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.68■□□□□ 0.58
PRPF19-204ENST00000539960 A0A1W2PP64 1363 aa18.68■□□□□ 0.58
PRPF19-204ENST00000539960 QTRT2Q9H974 415 aaKnown RBP18.67■□□□□ 0.58
PRPF19-204ENST00000539960 USP21Q9UK80 565 aa18.67■□□□□ 0.58
PRPF19-204ENST00000539960 USP19O94966 1318 aa18.67■□□□□ 0.58
PRPF19-204ENST00000539960 C11orf95C9JLR9 678 aaPredicted RBP18.66■□□□□ 0.58
PRPF19-204ENST00000539960 GCP02774 474 aa18.66■□□□□ 0.58
PRPF19-204ENST00000539960 ZC3H6P61129 1189 aaKnown RBP18.65■□□□□ 0.58
PRPF19-204ENST00000539960 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
PRPF19-204ENST00000539960 ANKRD36BQ8N2N9 1353 aa18.65■□□□□ 0.58
PRPF19-204ENST00000539960 EDC4Q6P2E9 1401 aaKnown RBP18.65■□□□□ 0.58
PRPF19-204ENST00000539960 AKAP12Q02952 1782 aa18.63■□□□□ 0.57
PRPF19-204ENST00000539960 NME9Q86XW9 330 aa18.63■□□□□ 0.57
PRPF19-204ENST00000539960 UNC5CLQ8IV45 518 aa18.63■□□□□ 0.57
PRPF19-204ENST00000539960 PRDM11Q9NQV5 511 aa18.63■□□□□ 0.57
PRPF19-204ENST00000539960 ZRANB1Q9UGI0 708 aa18.63■□□□□ 0.57
PRPF19-204ENST00000539960 TRPC5Q9UL62 973 aaPredicted RBP18.62■□□□□ 0.57
PRPF19-204ENST00000539960 BCL9LQ86UU0 1499 aa18.62■□□□□ 0.57
PRPF19-204ENST00000539960 USP31Q70CQ4 1352 aa18.61■□□□□ 0.57
PRPF19-204ENST00000539960 KIAA0232Q92628 1395 aa18.61■□□□□ 0.57
PRPF19-204ENST00000539960 RXRBP28702 533 aa18.61■□□□□ 0.57
PRPF19-204ENST00000539960 CARD14Q9BXL6 1004 aa18.61■□□□□ 0.57
PRPF19-204ENST00000539960 SLIT2O94813 1529 aa18.6■□□□□ 0.57
PRPF19-204ENST00000539960 CHRNA2Q15822 529 aa18.6■□□□□ 0.57
PRPF19-204ENST00000539960 KCNH5Q8NCM2 988 aa18.6■□□□□ 0.57
PRPF19-204ENST00000539960 BTG4Q9NY30 223 aa18.6■□□□□ 0.57
PRPF19-204ENST00000539960 RBM6P78332 1123 aaKnown RBP18.59■□□□□ 0.57
PRPF19-204ENST00000539960 CPDO75976 1380 aa18.58■□□□□ 0.57
PRPF19-204ENST00000539960 MON2Q7Z3U7 1717 aa18.58■□□□□ 0.57
PRPF19-204ENST00000539960 MARF1Q9Y4F3 1742 aaKnown RBP18.58■□□□□ 0.57
PRPF19-204ENST00000539960 ABCA3Q99758 1704 aa18.57■□□□□ 0.56
PRPF19-204ENST00000539960 PIK3C2AO00443 1686 aa18.57■□□□□ 0.56
PRPF19-204ENST00000539960 FYB1O15117 783 aa18.57■□□□□ 0.56
PRPF19-204ENST00000539960 CRYBG1Q9Y4K1 1723 aa18.57■□□□□ 0.56
PRPF19-204ENST00000539960 ATRNO75882 1429 aa18.57■□□□□ 0.56
PRPF19-204ENST00000539960 NRKQ7Z2Y5 1582 aa18.56■□□□□ 0.56
PRPF19-204ENST00000539960 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
PRPF19-204ENST00000539960 SOX12O15370 315 aa18.56■□□□□ 0.56
PRPF19-204ENST00000539960 GJD4Q96KN9 370 aaPredicted RBP18.56■□□□□ 0.56
PRPF19-204ENST00000539960 PANK3Q9H999 370 aa18.56■□□□□ 0.56
PRPF19-204ENST00000539960 VPS72Q15906 364 aa18.55■□□□□ 0.56
PRPF19-204ENST00000539960 ARHGEF25Q86VW2 580 aa18.55■□□□□ 0.56
PRPF19-204ENST00000539960 COG3Q96JB2 828 aa18.55■□□□□ 0.56
PRPF19-204ENST00000539960 SLIT3O75094 1523 aa18.54■□□□□ 0.56
PRPF19-204ENST00000539960 ZBTB7CA1YPR0 619 aa18.54■□□□□ 0.56
PRPF19-204ENST00000539960 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
PRPF19-204ENST00000539960 PHRF1Q9P1Y6 1649 aaKnown RBP18.53■□□□□ 0.56
PRPF19-204ENST00000539960 EVA1CP58658 441 aa18.53■□□□□ 0.56
PRPF19-204ENST00000539960 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
PRPF19-204ENST00000539960 CCDC9Q9Y3X0 531 aaKnown RBP18.52■□□□□ 0.56
PRPF19-204ENST00000539960 COL14A1Q05707 1796 aaKnown RBP18.52■□□□□ 0.55
PRPF19-204ENST00000539960 AATKQ6ZMQ8 1374 aa18.52■□□□□ 0.55
PRPF19-204ENST00000539960 MYOM1P52179 1685 aa18.5■□□□□ 0.55
PRPF19-204ENST00000539960 OVOS2A0A0J9YW53 1432 aa18.5■□□□□ 0.55
PRPF19-204ENST00000539960 OVOS2Q6IE36 1432 aa18.5■□□□□ 0.55
PRPF19-204ENST00000539960 NSD3Q9BZ95 1437 aa18.5■□□□□ 0.55
PRPF19-204ENST00000539960 STRN4Q9NRL3 753 aa18.5■□□□□ 0.55
PRPF19-204ENST00000539960 AXIN2Q9Y2T1 843 aa18.5■□□□□ 0.55
PRPF19-204ENST00000539960 CGNL1Q0VF96 1302 aa18.49■□□□□ 0.55
PRPF19-204ENST00000539960 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
PRPF19-204ENST00000539960 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
PRPF19-204ENST00000539960 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
PRPF19-204ENST00000539960 CAMTA1Q9Y6Y1 1673 aa18.48■□□□□ 0.55
PRPF19-204ENST00000539960 SPATA31A5Q5VU36 1347 aa18.48■□□□□ 0.55
PRPF19-204ENST00000539960 SPATA31A7Q8IWB4 1347 aa18.48■□□□□ 0.55
PRPF19-204ENST00000539960 PLCH1Q4KWH8 1693 aa18.47■□□□□ 0.55
PRPF19-204ENST00000539960 CDK12Q9NYV4 1490 aaPredicted RBP18.47■□□□□ 0.55
PRPF19-204ENST00000539960 ONECUT3O60422 494 aaPredicted RBP18.47■□□□□ 0.55
PRPF19-204ENST00000539960 FBLN1P23142 703 aa18.47■□□□□ 0.55
PRPF19-204ENST00000539960 NFAT5O94916 1531 aa18.47■□□□□ 0.55
PRPF19-204ENST00000539960 SOCS7O14512 581 aa18.46■□□□□ 0.55
PRPF19-204ENST00000539960 LARP1Q6PKG0 1096 aaKnown RBP18.46■□□□□ 0.55
PRPF19-204ENST00000539960 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms