RNA–Protein interactions for RNA: ENST00000539896.1

PTAFR-203, Transcript of platelet activating factor receptor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTAFR, Length 4,191 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFR-203ENST00000539896 G3BP1Q13283 466 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTAFR-203ENST00000539896 C1orf141Q5JVX7 400 aa11.9□□□□□ -0.5
PTAFR-203ENST00000539896 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.9□□□□□ -0.5
PTAFR-203ENST00000539896 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
PTAFR-203ENST00000539896 PLB1Q6P1J6 1458 aa11.9□□□□□ -0.51
PTAFR-203ENST00000539896 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
PTAFR-203ENST00000539896 TOMM22Q9NS69 142 aa11.89□□□□□ -0.51
PTAFR-203ENST00000539896 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
PTAFR-203ENST00000539896 TBC1D32Q96NH3 1257 aa11.89□□□□□ -0.51
PTAFR-203ENST00000539896 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
PTAFR-203ENST00000539896 CHMP4CQ96CF2 233 aa11.89□□□□□ -0.51
PTAFR-203ENST00000539896 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
PTAFR-203ENST00000539896 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
PTAFR-203ENST00000539896 C8orf34Q49A92 452 aa11.89□□□□□ -0.51
PTAFR-203ENST00000539896 ZSCAN30Q86W11 494 aa11.89□□□□□ -0.51
PTAFR-203ENST00000539896 CREBRFQ8IUR6 639 aa11.89□□□□□ -0.51
PTAFR-203ENST00000539896 GNAI2P04899 355 aa11.88□□□□□ -0.51
PTAFR-203ENST00000539896 SULT6B1Q6IMI4 303 aa11.88□□□□□ -0.51
PTAFR-203ENST00000539896 RRP9O43818 475 aaKnown RBP11.88□□□□□ -0.51
PTAFR-203ENST00000539896 FCHSD2O94868 740 aa11.88□□□□□ -0.51
PTAFR-203ENST00000539896 CCAR2Q8N163 923 aaKnown RBP11.88□□□□□ -0.51
PTAFR-203ENST00000539896 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
PTAFR-203ENST00000539896 IFT140Q96RY7 1462 aa11.88□□□□□ -0.51
PTAFR-203ENST00000539896 TRIM27P14373 513 aa11.87□□□□□ -0.51
PTAFR-203ENST00000539896 CDK19Q9BWU1 502 aa11.87□□□□□ -0.51
PTAFR-203ENST00000539896 HMGN5P82970 282 aaKnown RBP11.87□□□□□ -0.51
PTAFR-203ENST00000539896 CNTROBQ8N137 903 aa11.87□□□□□ -0.51
PTAFR-203ENST00000539896 TNPO1Q92973 898 aaKnown RBP11.87□□□□□ -0.51
PTAFR-203ENST00000539896 MAGI1Q96QZ7 1491 aaPredicted RBP11.87□□□□□ -0.51
PTAFR-203ENST00000539896 CCDC73Q6ZRK6 1079 aa11.87□□□□□ -0.51
PTAFR-203ENST00000539896 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
PTAFR-203ENST00000539896 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
PTAFR-203ENST00000539896 PCDHB15Q9Y5E8 787 aa11.87□□□□□ -0.51
PTAFR-203ENST00000539896 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
PTAFR-203ENST00000539896 FOSBP53539 338 aa11.86□□□□□ -0.51
PTAFR-203ENST00000539896 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
PTAFR-203ENST00000539896 PARD3Q8TEW0 1356 aa11.86□□□□□ -0.51
PTAFR-203ENST00000539896 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
PTAFR-203ENST00000539896 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
PTAFR-203ENST00000539896 TRIM5Q9C035 493 aa11.86□□□□□ -0.51
PTAFR-203ENST00000539896 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
PTAFR-203ENST00000539896 CPLX2Q6PUV4 134 aaKnown RBP11.86□□□□□ -0.51
PTAFR-203ENST00000539896 DHX29Q7Z478 1369 aaKnown RBP11.86□□□□□ -0.51
PTAFR-203ENST00000539896 CPLX1O14810 134 aa11.86□□□□□ -0.51
PTAFR-203ENST00000539896 LETM1O95202 739 aaPredicted RBP11.86□□□□□ -0.51
PTAFR-203ENST00000539896 SSFA2P28290 1259 aa11.86□□□□□ -0.51
PTAFR-203ENST00000539896 NFE2L2Q16236 605 aa11.86□□□□□ -0.51
PTAFR-203ENST00000539896 RPAP2Q8IXW5 612 aaPredicted RBP11.86□□□□□ -0.51
PTAFR-203ENST00000539896 WDR33Q9C0J8 1336 aaKnown RBP11.85□□□□□ -0.51
PTAFR-203ENST00000539896 PKNOX2Q96KN3 472 aa11.85□□□□□ -0.51
PTAFR-203ENST00000539896 LRRCC1Q9C099 1032 aa11.85□□□□□ -0.51
PTAFR-203ENST00000539896 TPM3P06753 285 aa11.85□□□□□ -0.51
PTAFR-203ENST00000539896 GOLGA6L1Q8N7Z2 621 aa11.85□□□□□ -0.51
PTAFR-203ENST00000539896 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 CCT4P50991 539 aaKnown RBP11.84□□□□□ -0.51
PTAFR-203ENST00000539896 NLRP6P59044 892 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 RASSF8Q8NHQ8 419 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 RALGAPBQ86X10 1494 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 UGGT2Q9NYU1 1516 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 UQCRHLA0A096LP55 91 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 SYCE3A1L190 88 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 UQCRHP07919 91 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 PDCP20941 246 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 SAMD9Q5K651 1589 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 NUTM2GQ5VZR2 741 aa11.84□□□□□ -0.51
PTAFR-203ENST00000539896 GAS2L2Q8NHY3 880 aa11.83□□□□□ -0.52
PTAFR-203ENST00000539896 SDF4Q9BRK5 362 aa11.83□□□□□ -0.52
PTAFR-203ENST00000539896 PSMA5P28066 241 aa11.83□□□□□ -0.52
PTAFR-203ENST00000539896 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
PTAFR-203ENST00000539896 ALDH1L2Q3SY69 923 aa11.83□□□□□ -0.52
PTAFR-203ENST00000539896 FSD1Q9BTV5 496 aa11.83□□□□□ -0.52
PTAFR-203ENST00000539896 WDR62O43379 1518 aa11.83□□□□□ -0.52
PTAFR-203ENST00000539896 XRCC6P12956 609 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTAFR-203ENST00000539896 ATAD2Q6PL18 1390 aa11.82□□□□□ -0.52
PTAFR-203ENST00000539896 EXOC6BQ9Y2D4 811 aa11.82□□□□□ -0.52
PTAFR-203ENST00000539896 RNF123Q5XPI4 1314 aa11.82□□□□□ -0.52
PTAFR-203ENST00000539896 RPGRIP1LQ68CZ1 1315 aa11.82□□□□□ -0.52
PTAFR-203ENST00000539896 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
PTAFR-203ENST00000539896 TXNDC2Q86VQ3 553 aa11.82□□□□□ -0.52
PTAFR-203ENST00000539896 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
PTAFR-203ENST00000539896 ABCC11Q96J66 1382 aa11.82□□□□□ -0.52
PTAFR-203ENST00000539896 PER1O15534 1290 aaPredicted RBP11.82□□□□□ -0.52
PTAFR-203ENST00000539896 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
PTAFR-203ENST00000539896 SLC52A1Q9NWF4 448 aa11.82□□□□□ -0.52
PTAFR-203ENST00000539896 HDGFL1Q5TGJ6 251 aa11.81□□□□□ -0.52
PTAFR-203ENST00000539896 TTC5Q8N0Z6 440 aa11.81□□□□□ -0.52
PTAFR-203ENST00000539896 TESK2Q96S53 571 aa11.81□□□□□ -0.52
PTAFR-203ENST00000539896 PANK2Q9BZ23 570 aa11.81□□□□□ -0.52
PTAFR-203ENST00000539896 IL1RAPL2Q9NP60 686 aa11.81□□□□□ -0.52
PTAFR-203ENST00000539896 ADAMTS12P58397 1594 aa11.81□□□□□ -0.52
PTAFR-203ENST00000539896 PES1O00541 588 aaKnown RBP11.81□□□□□ -0.52
PTAFR-203ENST00000539896 TPD52L1Q16890 204 aaPredicted RBP11.81□□□□□ -0.52
PTAFR-203ENST00000539896 BMP2KLQ5H9B9 411 aa11.81□□□□□ -0.52
PTAFR-203ENST00000539896 GPATCH8Q9UKJ3 1502 aaKnown RBP11.81□□□□□ -0.52
PTAFR-203ENST00000539896 PLEKHH1Q9ULM0 1364 aa11.81□□□□□ -0.52
PTAFR-203ENST00000539896 SMARCA5O60264 1052 aaPredicted RBP11.81□□□□□ -0.52
PTAFR-203ENST00000539896 SCAF11Q99590 1463 aaKnown RBP11.81□□□□□ -0.52
PTAFR-203ENST00000539896 DCTN1Q14203 1278 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms