RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 LRRFIP1Q32MZ4 808 aaKnown RBP17.6■□□□□ 0.41
CACNB1-206ENST00000539338 CPLX2Q6PUV4 134 aaKnown RBP17.6■□□□□ 0.41
CACNB1-206ENST00000539338 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
CACNB1-206ENST00000539338 PDE4CQ08493 712 aa17.6■□□□□ 0.41
CACNB1-206ENST00000539338 HSP90AB4PQ58FF6 505 aa17.6■□□□□ 0.41
CACNB1-206ENST00000539338 ERC2O15083 957 aa17.59■□□□□ 0.41
CACNB1-206ENST00000539338 GOLGA6L1Q8N7Z2 621 aa17.59■□□□□ 0.41
CACNB1-206ENST00000539338 FBXW7Q969H0 707 aa17.59■□□□□ 0.41
CACNB1-206ENST00000539338 DAPK1P53355 1430 aa17.59■□□□□ 0.41
CACNB1-206ENST00000539338 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
CACNB1-206ENST00000539338 TRAK2O60296 914 aa17.59■□□□□ 0.41
CACNB1-206ENST00000539338 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
CACNB1-206ENST00000539338 AMOTL1Q8IY63 956 aa17.58■□□□□ 0.41
CACNB1-206ENST00000539338 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.41
CACNB1-206ENST00000539338 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.4
CACNB1-206ENST00000539338 ERBINQ96RT1 1412 aa17.58■□□□□ 0.4
CACNB1-206ENST00000539338 VPS53Q5VIR6 699 aa17.58■□□□□ 0.4
CACNB1-206ENST00000539338 RIC3Q7Z5B4 369 aa17.58■□□□□ 0.4
CACNB1-206ENST00000539338 FAM135AQ9P2D6 1515 aa17.57■□□□□ 0.4
CACNB1-206ENST00000539338 TRIM29Q14134 588 aa17.57■□□□□ 0.4
CACNB1-206ENST00000539338 FAM43AQ8N2R8 423 aa17.57■□□□□ 0.4
CACNB1-206ENST00000539338 FAM13BQ9NYF5 915 aa17.57■□□□□ 0.4
CACNB1-206ENST00000539338 POLD1P28340 1107 aa17.57■□□□□ 0.4
CACNB1-206ENST00000539338 UHRF1BP1Q6BDS2 1440 aa17.57■□□□□ 0.4
CACNB1-206ENST00000539338 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
CACNB1-206ENST00000539338 EPRSP07814 1512 aaKnown RBP17.56■□□□□ 0.4
CACNB1-206ENST00000539338 NAIPQ13075 1403 aa17.56■□□□□ 0.4
CACNB1-206ENST00000539338 RNF214Q8ND24 703 aa17.56■□□□□ 0.4
CACNB1-206ENST00000539338 NEUROD6Q96NK8 337 aa17.56■□□□□ 0.4
CACNB1-206ENST00000539338 BRPF3Q9ULD4 1205 aa17.56■□□□□ 0.4
CACNB1-206ENST00000539338 RPGRIP1LQ68CZ1 1315 aa17.56■□□□□ 0.4
CACNB1-206ENST00000539338 TNNT3P45378 269 aaPredicted RBP17.56■□□□□ 0.4
CACNB1-206ENST00000539338 MRE11P49959 708 aa17.56■□□□□ 0.4
CACNB1-206ENST00000539338 CCAR1Q8IX12 1150 aaKnown RBP17.56■□□□□ 0.4
CACNB1-206ENST00000539338 HSPA2P54652 639 aa17.56■□□□□ 0.4
CACNB1-206ENST00000539338 VSIG10Q8N0Z9 540 aa17.56■□□□□ 0.4
CACNB1-206ENST00000539338 SURF6O75683 361 aaKnown RBP17.55■□□□□ 0.4
CACNB1-206ENST00000539338 NASPP49321 788 aaPredicted RBP17.55■□□□□ 0.4
CACNB1-206ENST00000539338 TRDNQ13061 729 aa17.55■□□□□ 0.4
CACNB1-206ENST00000539338 NEK4P51957 841 aa17.54■□□□□ 0.4
CACNB1-206ENST00000539338 C11orf95C9JLR9 678 aaPredicted RBP17.54■□□□□ 0.4
CACNB1-206ENST00000539338 CAVIN1Q6NZI2 390 aaKnown RBP17.54■□□□□ 0.4
CACNB1-206ENST00000539338 PAXIP1Q6ZW49 1069 aaPredicted RBP17.54■□□□□ 0.4
CACNB1-206ENST00000539338 SASS6Q6UVJ0 657 aa17.53■□□□□ 0.4
CACNB1-206ENST00000539338 CABP1Q9NZU7 370 aa17.53■□□□□ 0.4
CACNB1-206ENST00000539338 HECW1Q76N89 1606 aa17.53■□□□□ 0.4
CACNB1-206ENST00000539338 TSR1Q2NL82 804 aaKnown RBP17.53■□□□□ 0.4
CACNB1-206ENST00000539338 TNRQ92752 1358 aa17.53■□□□□ 0.4
CACNB1-206ENST00000539338 GNAI3P08754 354 aa17.53■□□□□ 0.4
CACNB1-206ENST00000539338 NFXL1Q6ZNB6 911 aa17.53■□□□□ 0.4
CACNB1-206ENST00000539338 VPS37DQ86XT2 251 aa17.53■□□□□ 0.4
CACNB1-206ENST00000539338 ASXL2Q76L83 1435 aa17.53■□□□□ 0.4
CACNB1-206ENST00000539338 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
CACNB1-206ENST00000539338 SUPT6HQ7KZ85 1726 aaKnown RBP17.52■□□□□ 0.4
CACNB1-206ENST00000539338 CDK13Q14004 1512 aaKnown RBP17.52■□□□□ 0.4
CACNB1-206ENST00000539338 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.4
CACNB1-206ENST00000539338 CCDC27Q2M243 656 aa17.52■□□□□ 0.4
CACNB1-206ENST00000539338 GCC1Q96CN9 775 aa17.52■□□□□ 0.4
CACNB1-206ENST00000539338 ZNF692Q9BU19 519 aaPredicted RBP17.52■□□□□ 0.39
CACNB1-206ENST00000539338 A0A0U1RQG5 324 aaPredicted RBP17.51■□□□□ 0.39
CACNB1-206ENST00000539338 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
CACNB1-206ENST00000539338 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
CACNB1-206ENST00000539338 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.51■□□□□ 0.39
CACNB1-206ENST00000539338 CNTROBQ8N137 903 aa17.51■□□□□ 0.39
CACNB1-206ENST00000539338 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
CACNB1-206ENST00000539338 TPM1P09493 284 aa17.51■□□□□ 0.39
CACNB1-206ENST00000539338 PLEKHO1Q53GL0 409 aaPredicted RBP17.51■□□□□ 0.39
CACNB1-206ENST00000539338 KRI1Q8N9T8 703 aaKnown RBP17.51■□□□□ 0.39
CACNB1-206ENST00000539338 PCF11O94913 1555 aaKnown RBP17.51■□□□□ 0.39
CACNB1-206ENST00000539338 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
CACNB1-206ENST00000539338 ZNF608Q9ULD9 1512 aaPredicted RBP17.51■□□□□ 0.39
CACNB1-206ENST00000539338 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
CACNB1-206ENST00000539338 SULT6B1Q6IMI4 303 aa17.51■□□□□ 0.39
CACNB1-206ENST00000539338 CLASRPQ8N2M8 674 aaKnown RBP17.51■□□□□ 0.39
CACNB1-206ENST00000539338 FSD1Q9BTV5 496 aa17.51■□□□□ 0.39
CACNB1-206ENST00000539338 WDR63Q8IWG1 891 aa17.5■□□□□ 0.39
CACNB1-206ENST00000539338 PRPF40AO75400 957 aaKnown RBP17.5■□□□□ 0.39
CACNB1-206ENST00000539338 MVPQ14764 893 aaKnown RBP17.5■□□□□ 0.39
CACNB1-206ENST00000539338 ATF7IPQ6VMQ6 1270 aa17.5■□□□□ 0.39
CACNB1-206ENST00000539338 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
CACNB1-206ENST00000539338 CUL7Q14999 1698 aa17.5■□□□□ 0.39
CACNB1-206ENST00000539338 WASHC4Q2M389 1173 aa17.5■□□□□ 0.39
CACNB1-206ENST00000539338 CCDC73Q6ZRK6 1079 aa17.5■□□□□ 0.39
CACNB1-206ENST00000539338 NINLQ9Y2I6 1382 aa17.5■□□□□ 0.39
CACNB1-206ENST00000539338 C8orf37Q96NL8 207 aa17.49■□□□□ 0.39
CACNB1-206ENST00000539338 HOMER1Q86YM7 354 aa17.49■□□□□ 0.39
CACNB1-206ENST00000539338 KCNH5Q8NCM2 988 aa17.49■□□□□ 0.39
CACNB1-206ENST00000539338 RABEP1Q15276 862 aa17.49■□□□□ 0.39
CACNB1-206ENST00000539338 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.48■□□□□ 0.39
CACNB1-206ENST00000539338 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
CACNB1-206ENST00000539338 RAD21O60216 631 aa17.48■□□□□ 0.39
CACNB1-206ENST00000539338 SKAP1Q86WV1 359 aa17.48■□□□□ 0.39
CACNB1-206ENST00000539338 IFT57Q9NWB7 429 aa17.48■□□□□ 0.39
CACNB1-206ENST00000539338 GNAI2P04899 355 aa17.47■□□□□ 0.39
CACNB1-206ENST00000539338 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
CACNB1-206ENST00000539338 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
CACNB1-206ENST00000539338 LRRC59Q96AG4 307 aaKnown RBP17.47■□□□□ 0.39
CACNB1-206ENST00000539338 R3HCC1Q9Y3T6 440 aaKnown RBP17.47■□□□□ 0.39
CACNB1-206ENST00000539338 SLFN5Q08AF3 891 aa17.46■□□□□ 0.39
CACNB1-206ENST00000539338 ZNF428Q96B54 188 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms