RNA–Protein interactions for RNA: ENST00000539170.5

GABARAPL1-205, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3 BASIC

Gene GABARAPL1, Length 1,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-205ENST00000539170 NEFLP07196 543 aa22.18■■□□□ 1.14
GABARAPL1-205ENST00000539170 SUPT16HQ9Y5B9 1047 aaKnown RBP22.18■■□□□ 1.14
GABARAPL1-205ENST00000539170 PNPLA6Q8IY17 1366 aa22.18■■□□□ 1.14
GABARAPL1-205ENST00000539170 NUTM2FA1L443 756 aa22.17■■□□□ 1.14
GABARAPL1-205ENST00000539170 NME9Q86XW9 330 aa22.17■■□□□ 1.14
GABARAPL1-205ENST00000539170 AATKQ6ZMQ8 1374 aa22.17■■□□□ 1.14
GABARAPL1-205ENST00000539170 TTC21BQ7Z4L5 1316 aa22.17■■□□□ 1.14
GABARAPL1-205ENST00000539170 LMTK3Q96Q04 1460 aa22.16■■□□□ 1.14
GABARAPL1-205ENST00000539170 MAP2P11137 1827 aaKnown RBP22.16■■□□□ 1.14
GABARAPL1-205ENST00000539170 NGEFQ8N5V2 710 aa22.15■■□□□ 1.14
GABARAPL1-205ENST00000539170 OVOS2A0A0J9YW53 1432 aa22.15■■□□□ 1.14
GABARAPL1-205ENST00000539170 OVOS2Q6IE36 1432 aa22.15■■□□□ 1.14
GABARAPL1-205ENST00000539170 SALL2Q9Y467 1007 aaPredicted RBP22.14■■□□□ 1.14
GABARAPL1-205ENST00000539170 IQSEC2Q5JU85 1478 aa22.14■■□□□ 1.13
GABARAPL1-205ENST00000539170 COG3Q96JB2 828 aa22.14■■□□□ 1.13
GABARAPL1-205ENST00000539170 TTC21AQ8NDW8 1320 aa22.13■■□□□ 1.13
GABARAPL1-205ENST00000539170 ZNF521Q96K83 1311 aa22.13■■□□□ 1.13
GABARAPL1-205ENST00000539170 CCDC146Q8IYE0 955 aa22.13■■□□□ 1.13
GABARAPL1-205ENST00000539170 FKBP8Q14318 412 aa22.12■■□□□ 1.13
GABARAPL1-205ENST00000539170 CDK12Q9NYV4 1490 aaPredicted RBP22.12■■□□□ 1.13
GABARAPL1-205ENST00000539170 POLKQ9UBT6 870 aa22.11■■□□□ 1.13
GABARAPL1-205ENST00000539170 ZRANB1Q9UGI0 708 aa22.11■■□□□ 1.13
GABARAPL1-205ENST00000539170 HSPA2P54652 639 aa22.1■■□□□ 1.13
GABARAPL1-205ENST00000539170 PMFBP1Q8TBY8 1022 aa22.1■■□□□ 1.13
GABARAPL1-205ENST00000539170 RUNDC1Q96C34 613 aa22.1■■□□□ 1.13
GABARAPL1-205ENST00000539170 USP54Q70EL1 1684 aa22.1■■□□□ 1.13
GABARAPL1-205ENST00000539170 APAF1O14727 1248 aa22.09■■□□□ 1.13
GABARAPL1-205ENST00000539170 NGDNQ8NEJ9 315 aaKnown RBP22.09■■□□□ 1.13
GABARAPL1-205ENST00000539170 PIK3C2AO00443 1686 aa22.08■■□□□ 1.13
GABARAPL1-205ENST00000539170 USP31Q70CQ4 1352 aa22.08■■□□□ 1.12
GABARAPL1-205ENST00000539170 STRCP1A6NGW2 1772 aa22.07■■□□□ 1.12
GABARAPL1-205ENST00000539170 DIAPH1O60610 1272 aaKnown RBP22.07■■□□□ 1.12
GABARAPL1-205ENST00000539170 RNF123Q5XPI4 1314 aa22.07■■□□□ 1.12
GABARAPL1-205ENST00000539170 LRRC7Q96NW7 1537 aa22.07■■□□□ 1.12
GABARAPL1-205ENST00000539170 CDCA7LQ96GN5 454 aa22.06■■□□□ 1.12
GABARAPL1-205ENST00000539170 NCBP3Q53F19 620 aaKnown RBP22.06■■□□□ 1.12
GABARAPL1-205ENST00000539170 U2AF1L5P0DN76 240 aaPredicted RBP22.05■■□□□ 1.12
GABARAPL1-205ENST00000539170 U2AF1Q01081 240 aaKnown RBP eCLIP22.05■■□□□ 1.12
GABARAPL1-205ENST00000539170 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
GABARAPL1-205ENST00000539170 STRCQ7RTU9 1775 aa22.04■■□□□ 1.12
GABARAPL1-205ENST00000539170 NCOA3Q9Y6Q9 1424 aa22.04■■□□□ 1.12
GABARAPL1-205ENST00000539170 FBLN1P23142 703 aa22.03■■□□□ 1.12
GABARAPL1-205ENST00000539170 GOLGA2Q08379 1002 aa22.03■■□□□ 1.12
GABARAPL1-205ENST00000539170 PHF8Q9UPP1 1060 aa22.03■■□□□ 1.12
GABARAPL1-205ENST00000539170 EMILIN1Q9Y6C2 1016 aa22.03■■□□□ 1.12
GABARAPL1-205ENST00000539170 MARF1Q9Y4F3 1742 aaKnown RBP22.03■■□□□ 1.12
GABARAPL1-205ENST00000539170 PROSER2Q86WR7 435 aaPredicted RBP22.03■■□□□ 1.12
GABARAPL1-205ENST00000539170 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
GABARAPL1-205ENST00000539170 ERICH6BQ5W0A0 696 aa22.01■■□□□ 1.11
GABARAPL1-205ENST00000539170 C14orf37Q86TY3 774 aa22■■□□□ 1.11
GABARAPL1-205ENST00000539170 TCP11L2Q8N4U5 519 aa22■■□□□ 1.11
GABARAPL1-205ENST00000539170 PHF23Q9BUL5 403 aaPredicted RBP22■■□□□ 1.11
GABARAPL1-205ENST00000539170 ILDR1Q86SU0 546 aaPredicted RBP22■■□□□ 1.11
GABARAPL1-205ENST00000539170 PLEKHF1Q96S99 279 aa22■■□□□ 1.11
GABARAPL1-205ENST00000539170 DCCP43146 1447 aa22■■□□□ 1.11
GABARAPL1-205ENST00000539170 CCDC27Q2M243 656 aa21.99■■□□□ 1.11
GABARAPL1-205ENST00000539170 PEAK1Q9H792 1746 aa21.99■■□□□ 1.11
GABARAPL1-205ENST00000539170 KIF1AQ12756 1690 aa21.99■■□□□ 1.11
GABARAPL1-205ENST00000539170 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
GABARAPL1-205ENST00000539170 SLFN5Q08AF3 891 aa21.98■■□□□ 1.11
GABARAPL1-205ENST00000539170 RRS1Q15050 365 aaKnown RBP21.98■■□□□ 1.11
GABARAPL1-205ENST00000539170 DUSP27Q5VZP5 1158 aa21.98■■□□□ 1.11
GABARAPL1-205ENST00000539170 TRMT2AQ8IZ69 625 aaKnown RBP21.98■■□□□ 1.11
GABARAPL1-205ENST00000539170 PNNQ9H307 717 aaKnown RBP21.97■■□□□ 1.11
GABARAPL1-205ENST00000539170 IL13P35225 146 aa21.97■■□□□ 1.11
GABARAPL1-205ENST00000539170 WWC1Q8IX03 1113 aa21.97■■□□□ 1.11
GABARAPL1-205ENST00000539170 C19orf44Q9H6X5 657 aa21.97■■□□□ 1.11
GABARAPL1-205ENST00000539170 RCAN3Q9UKA8 241 aa21.97■■□□□ 1.11
GABARAPL1-205ENST00000539170 TMEM94Q12767 1356 aa21.95■■□□□ 1.1
GABARAPL1-205ENST00000539170 E9PSI1 815 aa21.95■■□□□ 1.1
GABARAPL1-205ENST00000539170 FCHSD2O94868 740 aa21.95■■□□□ 1.1
GABARAPL1-205ENST00000539170 C1orf167Q5SNV9 1468 aa21.95■■□□□ 1.1
GABARAPL1-205ENST00000539170 ESCO1Q5FWF5 840 aa21.94■■□□□ 1.1
GABARAPL1-205ENST00000539170 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
GABARAPL1-205ENST00000539170 RSPH6AQ9H0K4 717 aa21.93■■□□□ 1.1
GABARAPL1-205ENST00000539170 MAPK8IP3Q9UPT6 1336 aa21.93■■□□□ 1.1
GABARAPL1-205ENST00000539170 RGPD1P0DJD0 1748 aa21.92■■□□□ 1.1
GABARAPL1-205ENST00000539170 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
GABARAPL1-205ENST00000539170 RRP7AQ9Y3A4 280 aaKnown RBP21.92■■□□□ 1.1
GABARAPL1-205ENST00000539170 XIRP1Q702N8 1843 aaKnown RBP21.92■■□□□ 1.1
GABARAPL1-205ENST00000539170 SBNO1A3KN83 1393 aa21.91■■□□□ 1.1
GABARAPL1-205ENST00000539170 MST1RQ04912 1400 aa21.91■■□□□ 1.1
GABARAPL1-205ENST00000539170 NLRP6P59044 892 aa21.91■■□□□ 1.1
GABARAPL1-205ENST00000539170 SPINK5Q9NQ38 1064 aaPredicted RBP21.91■■□□□ 1.1
GABARAPL1-205ENST00000539170 TRPM3Q9HCF6 1732 aaPredicted RBP21.91■■□□□ 1.1
GABARAPL1-205ENST00000539170 KIF24Q5T7B8 1368 aa21.9■■□□□ 1.1
GABARAPL1-205ENST00000539170 RRP1P56182 461 aaKnown RBP21.9■■□□□ 1.1
GABARAPL1-205ENST00000539170 DMRT2Q9Y5R5 561 aa21.9■■□□□ 1.1
GABARAPL1-205ENST00000539170 FLT4P35916 1363 aa21.9■■□□□ 1.1
GABARAPL1-205ENST00000539170 TMPOP42166 694 aaKnown RBP21.89■■□□□ 1.1
GABARAPL1-205ENST00000539170 NEUROD2Q15784 382 aa21.89■■□□□ 1.1
GABARAPL1-205ENST00000539170 MAP3K19Q56UN5 1328 aa21.89■■□□□ 1.1
GABARAPL1-205ENST00000539170 ABTB2Q8N961 1025 aa21.89■■□□□ 1.09
GABARAPL1-205ENST00000539170 ORAI2Q96SN7 254 aa21.89■■□□□ 1.09
GABARAPL1-205ENST00000539170 PSME1Q06323 249 aa21.87■■□□□ 1.09
GABARAPL1-205ENST00000539170 EIF4A2Q14240 407 aaKnown RBP21.87■■□□□ 1.09
GABARAPL1-205ENST00000539170 PAK3O75914 559 aaPredicted RBP21.86■■□□□ 1.09
GABARAPL1-205ENST00000539170 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
GABARAPL1-205ENST00000539170 NFAT5O94916 1531 aa21.86■■□□□ 1.09
GABARAPL1-205ENST00000539170 ATF3P18847 181 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms