RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 HAP1P54257 671 aaPredicted RBP11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 KIF1AQ12756 1690 aa11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 EDC4Q6P2E9 1401 aaKnown RBP11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 NME9Q86XW9 330 aa11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 TOPAZ1Q8N9V7 1692 aa11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 TTC21AQ8NDW8 1320 aa11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 COG3Q96JB2 828 aa11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 ROBO1Q9Y6N7 1651 aa11.73□□□□□ -0.53
LPCAT3-208ENST00000538987 BRD4O60885 1362 aaPredicted RBP11.72□□□□□ -0.53
LPCAT3-208ENST00000538987 FYB1O15117 783 aa11.72□□□□□ -0.53
LPCAT3-208ENST00000538987 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
LPCAT3-208ENST00000538987 MORC1Q86VD1 984 aa11.72□□□□□ -0.53
LPCAT3-208ENST00000538987 NLRP13Q86W25 1043 aa11.72□□□□□ -0.53
LPCAT3-208ENST00000538987 MYOM1P52179 1685 aa11.71□□□□□ -0.53
LPCAT3-208ENST00000538987 SPATA31A3Q5VYP0 1347 aa11.71□□□□□ -0.53
LPCAT3-208ENST00000538987 SOX12O15370 315 aa11.71□□□□□ -0.53
LPCAT3-208ENST00000538987 HSPA1LP34931 641 aa11.71□□□□□ -0.53
LPCAT3-208ENST00000538987 TNNT2P45379 298 aaPredicted RBP11.71□□□□□ -0.53
LPCAT3-208ENST00000538987 FBXO41Q8TF61 875 aa11.71□□□□□ -0.53
LPCAT3-208ENST00000538987 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
LPCAT3-208ENST00000538987 SBNO1A3KN83 1393 aa11.7□□□□□ -0.54
LPCAT3-208ENST00000538987 ANP32CO43423 234 aa11.7□□□□□ -0.54
LPCAT3-208ENST00000538987 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
LPCAT3-208ENST00000538987 PXDNQ92626 1479 aa11.69□□□□□ -0.54
LPCAT3-208ENST00000538987 SSH2Q76I76 1423 aa11.69□□□□□ -0.54
LPCAT3-208ENST00000538987 ARHGEF10O15013 1369 aa11.68□□□□□ -0.54
LPCAT3-208ENST00000538987 ZBTB7CA1YPR0 619 aa11.68□□□□□ -0.54
LPCAT3-208ENST00000538987 CABLES1Q8TDN4 633 aa11.68□□□□□ -0.54
LPCAT3-208ENST00000538987 TNS3Q68CZ2 1445 aa11.68□□□□□ -0.54
LPCAT3-208ENST00000538987 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
LPCAT3-208ENST00000538987 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
LPCAT3-208ENST00000538987 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
LPCAT3-208ENST00000538987 KCNH5Q8NCM2 988 aa11.67□□□□□ -0.54
LPCAT3-208ENST00000538987 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
LPCAT3-208ENST00000538987 NSD2O96028 1365 aa11.67□□□□□ -0.54
LPCAT3-208ENST00000538987 AHDC1Q5TGY3 1603 aaPredicted RBP11.66□□□□□ -0.54
LPCAT3-208ENST00000538987 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
LPCAT3-208ENST00000538987 NHSL1Q5SYE7 1610 aa11.65□□□□□ -0.54
LPCAT3-208ENST00000538987 PPM1GO15355 546 aaPredicted RBP11.65□□□□□ -0.54
LPCAT3-208ENST00000538987 GCP02774 474 aa11.65□□□□□ -0.54
LPCAT3-208ENST00000538987 RALBP1Q15311 655 aa11.65□□□□□ -0.54
LPCAT3-208ENST00000538987 MON2Q7Z3U7 1717 aa11.65□□□□□ -0.54
LPCAT3-208ENST00000538987 USP31Q70CQ4 1352 aa11.65□□□□□ -0.55
LPCAT3-208ENST00000538987 FBLN1P23142 703 aa11.64□□□□□ -0.55
LPCAT3-208ENST00000538987 ZC3H6P61129 1189 aaKnown RBP11.64□□□□□ -0.55
LPCAT3-208ENST00000538987 JCADQ9P266 1359 aa11.64□□□□□ -0.55
LPCAT3-208ENST00000538987 NPC1L1Q9UHC9 1359 aa11.64□□□□□ -0.55
LPCAT3-208ENST00000538987 ADAMTS2O95450 1211 aa11.63□□□□□ -0.55
LPCAT3-208ENST00000538987 PRKRIP1Q9H875 184 aaPredicted RBP11.63□□□□□ -0.55
LPCAT3-208ENST00000538987 PNPLA6Q8IY17 1366 aa11.63□□□□□ -0.55
LPCAT3-208ENST00000538987 AMPHP49418 695 aa11.62□□□□□ -0.55
LPCAT3-208ENST00000538987 RRS1Q15050 365 aaKnown RBP11.62□□□□□ -0.55
LPCAT3-208ENST00000538987 NRKQ7Z2Y5 1582 aa11.62□□□□□ -0.55
LPCAT3-208ENST00000538987 TRPM3Q9HCF6 1732 aaPredicted RBP11.61□□□□□ -0.55
LPCAT3-208ENST00000538987 PPP2R1AP30153 589 aa11.61□□□□□ -0.55
LPCAT3-208ENST00000538987 MEX3CQ5U5Q3 659 aaKnown RBP11.61□□□□□ -0.55
LPCAT3-208ENST00000538987 USP19O94966 1318 aa11.6□□□□□ -0.55
LPCAT3-208ENST00000538987 OVOS2A0A0J9YW53 1432 aa11.6□□□□□ -0.55
LPCAT3-208ENST00000538987 OVOS2Q6IE36 1432 aa11.6□□□□□ -0.55
LPCAT3-208ENST00000538987 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
LPCAT3-208ENST00000538987 PIK3C2AO00443 1686 aa11.6□□□□□ -0.55
LPCAT3-208ENST00000538987 PRDM11Q9NQV5 511 aa11.6□□□□□ -0.55
LPCAT3-208ENST00000538987 SPATA31A6Q5VVP1 1343 aa11.6□□□□□ -0.55
LPCAT3-208ENST00000538987 MTHFSP49914 203 aa11.59□□□□□ -0.55
LPCAT3-208ENST00000538987 CHRNA2Q15822 529 aa11.59□□□□□ -0.55
LPCAT3-208ENST00000538987 CFAP53Q96M91 514 aa11.59□□□□□ -0.55
LPCAT3-208ENST00000538987 POLKQ9UBT6 870 aa11.59□□□□□ -0.55
LPCAT3-208ENST00000538987 EMILIN1Q9Y6C2 1016 aa11.59□□□□□ -0.55
LPCAT3-208ENST00000538987 MYBBP1AQ9BQG0 1328 aaKnown RBP11.59□□□□□ -0.55
LPCAT3-208ENST00000538987 ALS2Q96Q42 1657 aa11.59□□□□□ -0.55
LPCAT3-208ENST00000538987 KIF20BQ96Q89 1820 aa11.58□□□□□ -0.56
LPCAT3-208ENST00000538987 PARD3Q8TEW0 1356 aa11.58□□□□□ -0.56
LPCAT3-208ENST00000538987 ARHGEF25Q86VW2 580 aa11.58□□□□□ -0.56
LPCAT3-208ENST00000538987 MIER1Q8N108 512 aa11.58□□□□□ -0.56
LPCAT3-208ENST00000538987 MAP3K19Q56UN5 1328 aa11.58□□□□□ -0.56
LPCAT3-208ENST00000538987 AATKQ6ZMQ8 1374 aa11.57□□□□□ -0.56
LPCAT3-208ENST00000538987 KIAA0232Q92628 1395 aa11.57□□□□□ -0.56
LPCAT3-208ENST00000538987 EVA1CP58658 441 aa11.57□□□□□ -0.56
LPCAT3-208ENST00000538987 LTV1Q96GA3 475 aaPredicted RBP11.57□□□□□ -0.56
LPCAT3-208ENST00000538987 NGLY1Q96IV0 654 aa11.57□□□□□ -0.56
LPCAT3-208ENST00000538987 C8orf37Q96NL8 207 aa11.57□□□□□ -0.56
LPCAT3-208ENST00000538987 FAM83GA6ND36 823 aa11.56□□□□□ -0.56
LPCAT3-208ENST00000538987 MED1Q15648 1581 aaPredicted RBP11.56□□□□□ -0.56
LPCAT3-208ENST00000538987 ILDR1Q86SU0 546 aaPredicted RBP11.56□□□□□ -0.56
LPCAT3-208ENST00000538987 IP6K1Q92551 441 aa11.56□□□□□ -0.56
LPCAT3-208ENST00000538987 CSB-PGBD3P0DP91 1061 aa11.55□□□□□ -0.56
LPCAT3-208ENST00000538987 HOXC9P31274 260 aa11.55□□□□□ -0.56
LPCAT3-208ENST00000538987 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
LPCAT3-208ENST00000538987 SLIT3O75094 1523 aa11.55□□□□□ -0.56
LPCAT3-208ENST00000538987 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
LPCAT3-208ENST00000538987 STRN4Q9NRL3 753 aa11.54□□□□□ -0.56
LPCAT3-208ENST00000538987 BTG4Q9NY30 223 aa11.54□□□□□ -0.56
LPCAT3-208ENST00000538987 CPDO75976 1380 aa11.54□□□□□ -0.56
LPCAT3-208ENST00000538987 U2SURPO15042 1029 aaKnown RBP11.53□□□□□ -0.56
LPCAT3-208ENST00000538987 DIAPH1O60610 1272 aaKnown RBP11.53□□□□□ -0.56
LPCAT3-208ENST00000538987 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
LPCAT3-208ENST00000538987 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
LPCAT3-208ENST00000538987 FLT4P35916 1363 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms