RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 MIER1Q8N108 512 aa19.33■□□□□ 0.68
CD4-208ENST00000538827 C19orf44Q9H6X5 657 aa19.33■□□□□ 0.68
CD4-208ENST00000538827 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
CD4-208ENST00000538827 ANKRD26Q9UPS8 1709 aa19.31■□□□□ 0.68
CD4-208ENST00000538827 MST1RQ04912 1400 aa19.31■□□□□ 0.68
CD4-208ENST00000538827 C1orf167Q5SNV9 1468 aa19.3■□□□□ 0.68
CD4-208ENST00000538827 NUTM2BA6NNL0 878 aaPredicted RBP19.3■□□□□ 0.68
CD4-208ENST00000538827 NUTM2EB1AL46 878 aaPredicted RBP19.3■□□□□ 0.68
CD4-208ENST00000538827 CC2D1BQ5T0F9 858 aaKnown RBP19.3■□□□□ 0.68
CD4-208ENST00000538827 NUTM2AQ8IVF1 878 aaPredicted RBP19.3■□□□□ 0.68
CD4-208ENST00000538827 PMFBP1Q8TBY8 1022 aa19.3■□□□□ 0.68
CD4-208ENST00000538827 CARD14Q9BXL6 1004 aa19.3■□□□□ 0.68
CD4-208ENST00000538827 QTRT2Q9H974 415 aaKnown RBP19.3■□□□□ 0.68
CD4-208ENST00000538827 ACEP12821 1306 aa19.28■□□□□ 0.68
CD4-208ENST00000538827 RGS12O14924 1447 aa19.28■□□□□ 0.68
CD4-208ENST00000538827 CPSF1Q10570 1443 aaKnown RBP19.28■□□□□ 0.68
CD4-208ENST00000538827 PER1O15534 1290 aaPredicted RBP19.28■□□□□ 0.68
CD4-208ENST00000538827 NGDNQ8NEJ9 315 aaKnown RBP19.28■□□□□ 0.68
CD4-208ENST00000538827 EDC4Q6P2E9 1401 aaKnown RBP19.27■□□□□ 0.68
CD4-208ENST00000538827 PLEKHG3A1L390 1219 aa19.27■□□□□ 0.68
CD4-208ENST00000538827 ESCO1Q5FWF5 840 aa19.27■□□□□ 0.68
CD4-208ENST00000538827 CGNL1Q0VF96 1302 aa19.26■□□□□ 0.67
CD4-208ENST00000538827 NGLY1Q96IV0 654 aa19.26■□□□□ 0.67
CD4-208ENST00000538827 PHF8Q9UPP1 1060 aa19.26■□□□□ 0.67
CD4-208ENST00000538827 USP6P35125 1406 aa19.25■□□□□ 0.67
CD4-208ENST00000538827 POLR3AO14802 1390 aaPredicted RBP19.25■□□□□ 0.67
CD4-208ENST00000538827 PRKRIP1Q9H875 184 aaPredicted RBP19.25■□□□□ 0.67
CD4-208ENST00000538827 AMER1Q5JTC6 1135 aaPredicted RBP19.24■□□□□ 0.67
CD4-208ENST00000538827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.24■□□□□ 0.67
CD4-208ENST00000538827 PARD3Q8TEW0 1356 aa19.23■□□□□ 0.67
CD4-208ENST00000538827 NPC1L1Q9UHC9 1359 aa19.23■□□□□ 0.67
CD4-208ENST00000538827 BRINP3Q76B58 766 aa19.23■□□□□ 0.67
CD4-208ENST00000538827 ORAI2Q96SN7 254 aa19.23■□□□□ 0.67
CD4-208ENST00000538827 NSD2O96028 1365 aa19.22■□□□□ 0.67
CD4-208ENST00000538827 LRRC59Q96AG4 307 aaKnown RBP19.22■□□□□ 0.67
CD4-208ENST00000538827 ZNF692Q9BU19 519 aaPredicted RBP19.22■□□□□ 0.67
CD4-208ENST00000538827 C8orf37Q96NL8 207 aa19.21■□□□□ 0.67
CD4-208ENST00000538827 RALBP1Q15311 655 aa19.2■□□□□ 0.66
CD4-208ENST00000538827 CCDC125Q86Z20 511 aa19.2■□□□□ 0.66
CD4-208ENST00000538827 PIK3C2AO00443 1686 aa19.2■□□□□ 0.66
CD4-208ENST00000538827 TRPM3Q9HCF6 1732 aaPredicted RBP19.19■□□□□ 0.66
CD4-208ENST00000538827 GGNBP2Q9H3C7 697 aa19.18■□□□□ 0.66
CD4-208ENST00000538827 TTC21BQ7Z4L5 1316 aa19.18■□□□□ 0.66
CD4-208ENST00000538827 MYBBP1AQ9BQG0 1328 aaKnown RBP19.18■□□□□ 0.66
CD4-208ENST00000538827 MORC1Q86VD1 984 aa19.17■□□□□ 0.66
CD4-208ENST00000538827 NME9Q86XW9 330 aa19.17■□□□□ 0.66
CD4-208ENST00000538827 PAK3O75914 559 aaPredicted RBP19.15■□□□□ 0.66
CD4-208ENST00000538827 XPCQ01831 940 aaPredicted RBP19.15■□□□□ 0.66
CD4-208ENST00000538827 PSME1Q06323 249 aa19.15■□□□□ 0.66
CD4-208ENST00000538827 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
CD4-208ENST00000538827 SSH2Q76I76 1423 aa19.15■□□□□ 0.66
CD4-208ENST00000538827 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.66
CD4-208ENST00000538827 CCER2I3L3R5 266 aa19.14■□□□□ 0.65
CD4-208ENST00000538827 FYB1O15117 783 aa19.14■□□□□ 0.65
CD4-208ENST00000538827 FOXO3O43524 673 aa19.14■□□□□ 0.65
CD4-208ENST00000538827 TNNT2P45379 298 aaPredicted RBP19.14■□□□□ 0.65
CD4-208ENST00000538827 USP54Q70EL1 1684 aa19.14■□□□□ 0.65
CD4-208ENST00000538827 MARF1Q9Y4F3 1742 aaKnown RBP19.14■□□□□ 0.65
CD4-208ENST00000538827 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
CD4-208ENST00000538827 TRPC5Q9UL62 973 aaPredicted RBP19.12■□□□□ 0.65
CD4-208ENST00000538827 ALS2Q96Q42 1657 aa19.11■□□□□ 0.65
CD4-208ENST00000538827 OVOS2A0A0J9YW53 1432 aa19.11■□□□□ 0.65
CD4-208ENST00000538827 OVOS2Q6IE36 1432 aa19.11■□□□□ 0.65
CD4-208ENST00000538827 NPHP3Q7Z494 1330 aa19.11■□□□□ 0.65
CD4-208ENST00000538827 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
CD4-208ENST00000538827 COG3Q96JB2 828 aa19.11■□□□□ 0.65
CD4-208ENST00000538827 MRS2Q9HD23 443 aa19.11■□□□□ 0.65
CD4-208ENST00000538827 PXDNQ92626 1479 aa19.1■□□□□ 0.65
CD4-208ENST00000538827 PNPLA6Q8IY17 1366 aa19.1■□□□□ 0.65
CD4-208ENST00000538827 PPP2R1AP30153 589 aa19.1■□□□□ 0.65
CD4-208ENST00000538827 KRT28Q7Z3Y7 464 aa19.1■□□□□ 0.65
CD4-208ENST00000538827 NLRP13Q86W25 1043 aa19.09■□□□□ 0.65
CD4-208ENST00000538827 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.64
CD4-208ENST00000538827 LMOD2Q6P5Q4 547 aa19.08■□□□□ 0.64
CD4-208ENST00000538827 USP21Q9UK80 565 aa19.08■□□□□ 0.64
CD4-208ENST00000538827 MAP2P11137 1827 aaKnown RBP19.08■□□□□ 0.64
CD4-208ENST00000538827 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
CD4-208ENST00000538827 ABTB2Q8N961 1025 aa19.07■□□□□ 0.64
CD4-208ENST00000538827 TNS3Q68CZ2 1445 aa19.07■□□□□ 0.64
CD4-208ENST00000538827 SOX12O15370 315 aa19.06■□□□□ 0.64
CD4-208ENST00000538827 ADAMTS2O95450 1211 aa19.06■□□□□ 0.64
CD4-208ENST00000538827 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
CD4-208ENST00000538827 PLEKHG5O94827 1062 aa19.05■□□□□ 0.64
CD4-208ENST00000538827 NLRP6P59044 892 aa19.05■□□□□ 0.64
CD4-208ENST00000538827 FNBP4Q8N3X1 1017 aaPredicted RBP19.05■□□□□ 0.64
CD4-208ENST00000538827 EP400Q96L91 3159 aa19.05■□□□□ 0.64
CD4-208ENST00000538827 PHRF1Q9P1Y6 1649 aaKnown RBP19.04■□□□□ 0.64
CD4-208ENST00000538827 SBNO1A3KN83 1393 aa19.04■□□□□ 0.64
CD4-208ENST00000538827 LTN1O94822 1766 aa19.03■□□□□ 0.64
CD4-208ENST00000538827 SLIT3O75094 1523 aa19.01■□□□□ 0.63
CD4-208ENST00000538827 CRYBG1Q9Y4K1 1723 aa19.01■□□□□ 0.63
CD4-208ENST00000538827 ATRNO75882 1429 aa19■□□□□ 0.63
CD4-208ENST00000538827 ABCA3Q99758 1704 aa19■□□□□ 0.63
CD4-208ENST00000538827 ARHGEF10O15013 1369 aa18.99■□□□□ 0.63
CD4-208ENST00000538827 AATKQ6ZMQ8 1374 aa18.99■□□□□ 0.63
CD4-208ENST00000538827 FBLN1P23142 703 aa18.99■□□□□ 0.63
CD4-208ENST00000538827 MTHFSP49914 203 aa18.99■□□□□ 0.63
CD4-208ENST00000538827 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
CD4-208ENST00000538827 PEAK1Q9H792 1746 aa18.99■□□□□ 0.63
CD4-208ENST00000538827 NFAT5O94916 1531 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms