RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SIRT1Q96EB6 747 aa18.62■□□□□ 0.57
ACTN1-205ENST00000538545 POLKQ9UBT6 870 aa18.61■□□□□ 0.57
ACTN1-205ENST00000538545 EXOC6Q8TAG9 804 aa18.61■□□□□ 0.57
ACTN1-205ENST00000538545 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
ACTN1-205ENST00000538545 SLFN5Q08AF3 891 aa18.6■□□□□ 0.57
ACTN1-205ENST00000538545 WWC1Q8IX03 1113 aa18.6■□□□□ 0.57
ACTN1-205ENST00000538545 TSHZ2Q9NRE2 1034 aa18.6■□□□□ 0.57
ACTN1-205ENST00000538545 C20orf194Q5TEA3 1177 aa18.59■□□□□ 0.57
ACTN1-205ENST00000538545 RUNDC1Q96C34 613 aa18.59■□□□□ 0.57
ACTN1-205ENST00000538545 ADAMTSL3P82987 1691 aa18.59■□□□□ 0.57
ACTN1-205ENST00000538545 RGPD8O14715 1765 aaPredicted RBP18.59■□□□□ 0.57
ACTN1-205ENST00000538545 NKTRP30414 1462 aaKnown RBP18.59■□□□□ 0.57
ACTN1-205ENST00000538545 MAP2P11137 1827 aaKnown RBP18.59■□□□□ 0.57
ACTN1-205ENST00000538545 ANKLE2Q86XL3 938 aa18.58■□□□□ 0.57
ACTN1-205ENST00000538545 ANKRD26Q9UPS8 1709 aa18.57■□□□□ 0.56
ACTN1-205ENST00000538545 HMOX1P09601 288 aa18.57■□□□□ 0.56
ACTN1-205ENST00000538545 EDC4Q6P2E9 1401 aaKnown RBP18.56■□□□□ 0.56
ACTN1-205ENST00000538545 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
ACTN1-205ENST00000538545 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
ACTN1-205ENST00000538545 COL3A1P02461 1466 aaPredicted RBP18.55■□□□□ 0.56
ACTN1-205ENST00000538545 COG3Q96JB2 828 aa18.55■□□□□ 0.56
ACTN1-205ENST00000538545 NUTM2GQ5VZR2 741 aa18.55■□□□□ 0.56
ACTN1-205ENST00000538545 SETD1BQ9UPS6 1966 aaKnown RBP18.54■□□□□ 0.56
ACTN1-205ENST00000538545 BCAR3O75815 825 aa18.54■□□□□ 0.56
ACTN1-205ENST00000538545 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
ACTN1-205ENST00000538545 TTC21BQ7Z4L5 1316 aa18.53■□□□□ 0.56
ACTN1-205ENST00000538545 CCDC136Q96JN2 1154 aa18.53■□□□□ 0.56
ACTN1-205ENST00000538545 PLEKHG5O94827 1062 aa18.52■□□□□ 0.56
ACTN1-205ENST00000538545 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.56
ACTN1-205ENST00000538545 PLEKHF1Q96S99 279 aa18.52■□□□□ 0.56
ACTN1-205ENST00000538545 ITSN1Q15811 1721 aa18.52■□□□□ 0.56
ACTN1-205ENST00000538545 MON2Q7Z3U7 1717 aa18.51■□□□□ 0.55
ACTN1-205ENST00000538545 TRMT2AQ8IZ69 625 aaKnown RBP18.51■□□□□ 0.55
ACTN1-205ENST00000538545 IQSEC2Q5JU85 1478 aa18.51■□□□□ 0.55
ACTN1-205ENST00000538545 AKAP12Q02952 1782 aa18.51■□□□□ 0.55
ACTN1-205ENST00000538545 ERICH6BQ5W0A0 696 aa18.5■□□□□ 0.55
ACTN1-205ENST00000538545 CRBNQ96SW2 442 aa18.5■□□□□ 0.55
ACTN1-205ENST00000538545 DIP2AQ14689 1571 aa18.5■□□□□ 0.55
ACTN1-205ENST00000538545 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
ACTN1-205ENST00000538545 PLEKHG3A1L390 1219 aa18.5■□□□□ 0.55
ACTN1-205ENST00000538545 PTCH1Q13635 1447 aa18.49■□□□□ 0.55
ACTN1-205ENST00000538545 E9PSI1 815 aa18.49■□□□□ 0.55
ACTN1-205ENST00000538545 ADGRB2O60241 1585 aa18.49■□□□□ 0.55
ACTN1-205ENST00000538545 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
ACTN1-205ENST00000538545 PRKAR2BP31323 418 aa18.49■□□□□ 0.55
ACTN1-205ENST00000538545 TSR2Q969E8 191 aaKnown RBP18.49■□□□□ 0.55
ACTN1-205ENST00000538545 PHACTR3Q96KR7 559 aa18.49■□□□□ 0.55
ACTN1-205ENST00000538545 BCL2L13Q9BXK5 485 aa18.49■□□□□ 0.55
ACTN1-205ENST00000538545 PNPLA6Q8IY17 1366 aa18.49■□□□□ 0.55
ACTN1-205ENST00000538545 USP6P35125 1406 aa18.48■□□□□ 0.55
ACTN1-205ENST00000538545 TMPOP42166 694 aaKnown RBP18.48■□□□□ 0.55
ACTN1-205ENST00000538545 MAPK8IP3Q9UPT6 1336 aa18.47■□□□□ 0.55
ACTN1-205ENST00000538545 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
ACTN1-205ENST00000538545 HSPA2P54652 639 aa18.46■□□□□ 0.55
ACTN1-205ENST00000538545 C14orf37Q86TY3 774 aa18.46■□□□□ 0.55
ACTN1-205ENST00000538545 PAK3O75914 559 aaPredicted RBP18.46■□□□□ 0.55
ACTN1-205ENST00000538545 THUMPD2Q9BTF0 503 aaKnown RBP18.46■□□□□ 0.55
ACTN1-205ENST00000538545 TRIM35Q9UPQ4 493 aa18.46■□□□□ 0.55
ACTN1-205ENST00000538545 RIPK4P57078 832 aa18.45■□□□□ 0.54
ACTN1-205ENST00000538545 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
ACTN1-205ENST00000538545 HSP90AB2PQ58FF8 381 aa18.45■□□□□ 0.54
ACTN1-205ENST00000538545 SKAP1Q86WV1 359 aa18.45■□□□□ 0.54
ACTN1-205ENST00000538545 IL13P35225 146 aa18.45■□□□□ 0.54
ACTN1-205ENST00000538545 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-205ENST00000538545 AEBP1Q8IUX7 1158 aa18.44■□□□□ 0.54
ACTN1-205ENST00000538545 RSPH6AQ9H0K4 717 aa18.44■□□□□ 0.54
ACTN1-205ENST00000538545 XPCQ01831 940 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-205ENST00000538545 CHD2O14647 1828 aaKnown RBP18.43■□□□□ 0.54
ACTN1-205ENST00000538545 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
ACTN1-205ENST00000538545 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
ACTN1-205ENST00000538545 NPHP4O75161 1426 aaPredicted RBP18.42■□□□□ 0.54
ACTN1-205ENST00000538545 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
ACTN1-205ENST00000538545 NALCNQ8IZF0 1738 aa18.41■□□□□ 0.54
ACTN1-205ENST00000538545 NLRP6P59044 892 aa18.41■□□□□ 0.54
ACTN1-205ENST00000538545 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
ACTN1-205ENST00000538545 ESCO1Q5FWF5 840 aa18.41■□□□□ 0.54
ACTN1-205ENST00000538545 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
ACTN1-205ENST00000538545 OVOS2A0A0J9YW53 1432 aa18.4■□□□□ 0.54
ACTN1-205ENST00000538545 OVOS2Q6IE36 1432 aa18.4■□□□□ 0.54
ACTN1-205ENST00000538545 EIF4A2Q14240 407 aaKnown RBP18.4■□□□□ 0.54
ACTN1-205ENST00000538545 ORAI2Q96SN7 254 aa18.39■□□□□ 0.53
ACTN1-205ENST00000538545 SSH2Q76I76 1423 aa18.39■□□□□ 0.53
ACTN1-205ENST00000538545 FAM83GA6ND36 823 aa18.39■□□□□ 0.53
ACTN1-205ENST00000538545 FCHSD2O94868 740 aa18.39■□□□□ 0.53
ACTN1-205ENST00000538545 WDR63Q8IWG1 891 aa18.39■□□□□ 0.53
ACTN1-205ENST00000538545 AATKQ6ZMQ8 1374 aa18.38■□□□□ 0.53
ACTN1-205ENST00000538545 DCTN1Q14203 1278 aa18.38■□□□□ 0.53
ACTN1-205ENST00000538545 PIK3R4Q99570 1358 aa18.38■□□□□ 0.53
ACTN1-205ENST00000538545 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
ACTN1-205ENST00000538545 CCDC27Q2M243 656 aa18.37■□□□□ 0.53
ACTN1-205ENST00000538545 SULT6B1Q6IMI4 303 aa18.37■□□□□ 0.53
ACTN1-205ENST00000538545 ABTB2Q8N961 1025 aa18.37■□□□□ 0.53
ACTN1-205ENST00000538545 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
ACTN1-205ENST00000538545 PHF8Q9UPP1 1060 aa18.37■□□□□ 0.53
ACTN1-205ENST00000538545 FANCIQ9NVI1 1328 aa18.37■□□□□ 0.53
ACTN1-205ENST00000538545 EXOSC9Q06265 439 aaKnown RBP18.36■□□□□ 0.53
ACTN1-205ENST00000538545 PANK1Q8TE04 598 aa18.36■□□□□ 0.53
ACTN1-205ENST00000538545 CDK12Q9NYV4 1490 aaPredicted RBP18.36■□□□□ 0.53
ACTN1-205ENST00000538545 PEAK1Q9H792 1746 aa18.36■□□□□ 0.53
ACTN1-205ENST00000538545 FOXO3O43524 673 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms