RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 NUTM2GQ5VZR2 741 aa18.48■□□□□ 0.55
COPS7A-207ENST00000538375 AFF2P51816 1311 aa18.48■□□□□ 0.55
COPS7A-207ENST00000538375 CDK12Q9NYV4 1490 aaPredicted RBP18.47■□□□□ 0.55
COPS7A-207ENST00000538375 POLR3AO14802 1390 aaPredicted RBP18.47■□□□□ 0.55
COPS7A-207ENST00000538375 ARHGEF10O15013 1369 aa18.47■□□□□ 0.55
COPS7A-207ENST00000538375 EIF4G2P78344 907 aaKnown RBP eCLIP18.47■□□□□ 0.55
COPS7A-207ENST00000538375 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
COPS7A-207ENST00000538375 ZNF692Q9BU19 519 aaPredicted RBP18.45■□□□□ 0.54
COPS7A-207ENST00000538375 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
COPS7A-207ENST00000538375 HSPA5P11021 654 aaKnown RBP18.44■□□□□ 0.54
COPS7A-207ENST00000538375 POLR3GLQ9BT43 218 aa18.44■□□□□ 0.54
COPS7A-207ENST00000538375 TOPAZ1Q8N9V7 1692 aa18.44■□□□□ 0.54
COPS7A-207ENST00000538375 CDCA8Q53HL2 280 aa18.43■□□□□ 0.54
COPS7A-207ENST00000538375 HDGFL2Q7Z4V5 671 aaPredicted RBP18.43■□□□□ 0.54
COPS7A-207ENST00000538375 PUS7Q96PZ0 661 aaKnown RBP18.43■□□□□ 0.54
COPS7A-207ENST00000538375 TERF2IPQ9NYB0 399 aa18.41■□□□□ 0.54
COPS7A-207ENST00000538375 COL22A1Q8NFW1 1626 aaPredicted RBP18.41■□□□□ 0.54
COPS7A-207ENST00000538375 QTRT2Q9H974 415 aaKnown RBP18.4■□□□□ 0.54
COPS7A-207ENST00000538375 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
COPS7A-207ENST00000538375 TRPM3Q9HCF6 1732 aaPredicted RBP18.4■□□□□ 0.54
COPS7A-207ENST00000538375 NLRP6P59044 892 aa18.39■□□□□ 0.53
COPS7A-207ENST00000538375 RBM6P78332 1123 aaKnown RBP18.39■□□□□ 0.53
COPS7A-207ENST00000538375 NLRP13Q86W25 1043 aa18.39■□□□□ 0.53
COPS7A-207ENST00000538375 USP21Q9UK80 565 aa18.39■□□□□ 0.53
COPS7A-207ENST00000538375 USP6P35125 1406 aa18.39■□□□□ 0.53
COPS7A-207ENST00000538375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.38■□□□□ 0.53
COPS7A-207ENST00000538375 RGS12O14924 1447 aa18.38■□□□□ 0.53
COPS7A-207ENST00000538375 TTC21BQ7Z4L5 1316 aa18.37■□□□□ 0.53
COPS7A-207ENST00000538375 BRD4O60885 1362 aaPredicted RBP18.36■□□□□ 0.53
COPS7A-207ENST00000538375 ZC3H6P61129 1189 aaKnown RBP18.35■□□□□ 0.53
COPS7A-207ENST00000538375 ALS2Q96Q42 1657 aa18.34■□□□□ 0.53
COPS7A-207ENST00000538375 CPSF1Q10570 1443 aaKnown RBP18.34■□□□□ 0.53
COPS7A-207ENST00000538375 ZBTB7CA1YPR0 619 aa18.34■□□□□ 0.53
COPS7A-207ENST00000538375 FAM83GA6ND36 823 aa18.34■□□□□ 0.53
COPS7A-207ENST00000538375 FNBP4Q8N3X1 1017 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-207ENST00000538375 TTC21AQ8NDW8 1320 aa18.33■□□□□ 0.53
COPS7A-207ENST00000538375 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.52
COPS7A-207ENST00000538375 NINLQ9Y2I6 1382 aa18.32■□□□□ 0.52
COPS7A-207ENST00000538375 SOX12O15370 315 aa18.32■□□□□ 0.52
COPS7A-207ENST00000538375 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
COPS7A-207ENST00000538375 GCP02774 474 aa18.31■□□□□ 0.52
COPS7A-207ENST00000538375 NME9Q86XW9 330 aa18.31■□□□□ 0.52
COPS7A-207ENST00000538375 TRPC5Q9UL62 973 aaPredicted RBP18.31■□□□□ 0.52
COPS7A-207ENST00000538375 SSH2Q76I76 1423 aa18.31■□□□□ 0.52
COPS7A-207ENST00000538375 CHRNA2Q15822 529 aa18.3■□□□□ 0.52
COPS7A-207ENST00000538375 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
COPS7A-207ENST00000538375 ZRANB1Q9UGI0 708 aa18.3■□□□□ 0.52
COPS7A-207ENST00000538375 CCDC9Q9Y3X0 531 aaKnown RBP18.3■□□□□ 0.52
COPS7A-207ENST00000538375 CD163L1Q9NR16 1453 aa18.3■□□□□ 0.52
COPS7A-207ENST00000538375 AKAP12Q02952 1782 aa18.3■□□□□ 0.52
COPS7A-207ENST00000538375 BTG4Q9NY30 223 aa18.29■□□□□ 0.52
COPS7A-207ENST00000538375 KIAA0232Q92628 1395 aa18.29■□□□□ 0.52
COPS7A-207ENST00000538375 USP19O94966 1318 aa18.27■□□□□ 0.52
COPS7A-207ENST00000538375 MARF1Q9Y4F3 1742 aaKnown RBP18.27■□□□□ 0.52
COPS7A-207ENST00000538375 ATRNO75882 1429 aa18.27■□□□□ 0.52
COPS7A-207ENST00000538375 C11orf95C9JLR9 678 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-207ENST00000538375 ANKRD36BQ8N2N9 1353 aa18.27■□□□□ 0.51
COPS7A-207ENST00000538375 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
COPS7A-207ENST00000538375 EVA1CP58658 441 aa18.26■□□□□ 0.51
COPS7A-207ENST00000538375 KCNH5Q8NCM2 988 aa18.26■□□□□ 0.51
COPS7A-207ENST00000538375 ABCA3Q99758 1704 aa18.26■□□□□ 0.51
COPS7A-207ENST00000538375 BCL9LQ86UU0 1499 aa18.26■□□□□ 0.51
COPS7A-207ENST00000538375 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
COPS7A-207ENST00000538375 SRCAPQ6ZRS2 3230 aa18.25■□□□□ 0.51
COPS7A-207ENST00000538375 GJD4Q96KN9 370 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-207ENST00000538375 SLIT2O94813 1529 aa18.23■□□□□ 0.51
COPS7A-207ENST00000538375 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
COPS7A-207ENST00000538375 PIK3C2AO00443 1686 aa18.23■□□□□ 0.51
COPS7A-207ENST00000538375 COG3Q96JB2 828 aa18.23■□□□□ 0.51
COPS7A-207ENST00000538375 CARD14Q9BXL6 1004 aa18.22■□□□□ 0.51
COPS7A-207ENST00000538375 PHRF1Q9P1Y6 1649 aaKnown RBP18.22■□□□□ 0.51
COPS7A-207ENST00000538375 CRYBG1Q9Y4K1 1723 aa18.21■□□□□ 0.51
COPS7A-207ENST00000538375 VPS72Q15906 364 aa18.21■□□□□ 0.51
COPS7A-207ENST00000538375 GGNBP2Q9H3C7 697 aa18.21■□□□□ 0.51
COPS7A-207ENST00000538375 PANK3Q9H999 370 aa18.21■□□□□ 0.51
COPS7A-207ENST00000538375 NRKQ7Z2Y5 1582 aa18.21■□□□□ 0.51
COPS7A-207ENST00000538375 USP31Q70CQ4 1352 aa18.2■□□□□ 0.5
COPS7A-207ENST00000538375 COL14A1Q05707 1796 aaKnown RBP18.2■□□□□ 0.5
COPS7A-207ENST00000538375 FYB1O15117 783 aa18.2■□□□□ 0.5
COPS7A-207ENST00000538375 CPDO75976 1380 aa18.19■□□□□ 0.5
COPS7A-207ENST00000538375 KIF7Q2M1P5 1343 aa18.19■□□□□ 0.5
COPS7A-207ENST00000538375 A0A0G2JS52 829 aa18.18■□□□□ 0.5
COPS7A-207ENST00000538375 MYT1Q01538 1121 aa18.18■□□□□ 0.5
COPS7A-207ENST00000538375 ARHGEF25Q86VW2 580 aa18.18■□□□□ 0.5
COPS7A-207ENST00000538375 USP35Q9P2H5 1018 aa18.18■□□□□ 0.5
COPS7A-207ENST00000538375 PLCH1Q4KWH8 1693 aa18.18■□□□□ 0.5
COPS7A-207ENST00000538375 SLIT3O75094 1523 aa18.18■□□□□ 0.5
COPS7A-207ENST00000538375 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
COPS7A-207ENST00000538375 EP400Q96L91 3159 aa18.16■□□□□ 0.5
COPS7A-207ENST00000538375 CSB-PGBD3P0DP91 1061 aa18.15■□□□□ 0.5
COPS7A-207ENST00000538375 FBLN1P23142 703 aa18.15■□□□□ 0.5
COPS7A-207ENST00000538375 ZEB1P37275 1124 aaPredicted RBP18.15■□□□□ 0.5
COPS7A-207ENST00000538375 LARP1Q6PKG0 1096 aaKnown RBP18.15■□□□□ 0.5
COPS7A-207ENST00000538375 AXIN2Q9Y2T1 843 aa18.15■□□□□ 0.5
COPS7A-207ENST00000538375 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
COPS7A-207ENST00000538375 NWD2Q9ULI1 1742 aa18.15■□□□□ 0.5
COPS7A-207ENST00000538375 FAM98CQ17RN3 349 aaKnown RBP18.14■□□□□ 0.49
COPS7A-207ENST00000538375 MYOM1P52179 1685 aa18.14■□□□□ 0.49
COPS7A-207ENST00000538375 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
COPS7A-207ENST00000538375 CAMTA1Q9Y6Y1 1673 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms