RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 BRINP3Q76B58 766 aa11.16□□□□□ -0.62
CIT-209ENST00000538073 ORAI2Q96SN7 254 aa11.16□□□□□ -0.62
CIT-209ENST00000538073 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
CIT-209ENST00000538073 PHF8Q9UPP1 1060 aa11.16□□□□□ -0.62
CIT-209ENST00000538073 CD163L1Q9NR16 1453 aa11.16□□□□□ -0.62
CIT-209ENST00000538073 NHSL1Q5SYE7 1610 aa11.16□□□□□ -0.62
CIT-209ENST00000538073 AKAP12Q02952 1782 aa11.16□□□□□ -0.62
CIT-209ENST00000538073 UBAP1LF5GYI3 381 aa11.15□□□□□ -0.62
CIT-209ENST00000538073 ESCO1Q5FWF5 840 aa11.15□□□□□ -0.62
CIT-209ENST00000538073 SLC12A5Q9H2X9 1139 aa11.15□□□□□ -0.62
CIT-209ENST00000538073 CPSF1Q10570 1443 aaKnown RBP11.15□□□□□ -0.62
CIT-209ENST00000538073 MON2Q7Z3U7 1717 aa11.14□□□□□ -0.63
CIT-209ENST00000538073 AHDC1Q5TGY3 1603 aaPredicted RBP11.13□□□□□ -0.63
CIT-209ENST00000538073 ACEP12821 1306 aa11.13□□□□□ -0.63
CIT-209ENST00000538073 PMFBP1Q8TBY8 1022 aa11.13□□□□□ -0.63
CIT-209ENST00000538073 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
CIT-209ENST00000538073 A0A1W2PP64 1363 aa11.13□□□□□ -0.63
CIT-209ENST00000538073 ANKRD36BQ8N2N9 1353 aa11.13□□□□□ -0.63
CIT-209ENST00000538073 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
CIT-209ENST00000538073 POLR3GLQ9BT43 218 aa11.12□□□□□ -0.63
CIT-209ENST00000538073 ZNF692Q9BU19 519 aaPredicted RBP11.12□□□□□ -0.63
CIT-209ENST00000538073 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
CIT-209ENST00000538073 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
CIT-209ENST00000538073 PXDNQ92626 1479 aa11.12□□□□□ -0.63
CIT-209ENST00000538073 NPHP3Q7Z494 1330 aa11.11□□□□□ -0.63
CIT-209ENST00000538073 USP6P35125 1406 aa11.11□□□□□ -0.63
CIT-209ENST00000538073 SSH2Q76I76 1423 aa11.11□□□□□ -0.63
CIT-209ENST00000538073 NGDNQ8NEJ9 315 aaKnown RBP11.11□□□□□ -0.63
CIT-209ENST00000538073 BRD4O60885 1362 aaPredicted RBP11.11□□□□□ -0.63
CIT-209ENST00000538073 FOXO3O43524 673 aa11.1□□□□□ -0.63
CIT-209ENST00000538073 PIP4K2BP78356 416 aa11.1□□□□□ -0.63
CIT-209ENST00000538073 HDGFL2Q7Z4V5 671 aaPredicted RBP11.1□□□□□ -0.63
CIT-209ENST00000538073 KTN1Q86UP2 1357 aaKnown RBP11.1□□□□□ -0.63
CIT-209ENST00000538073 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
CIT-209ENST00000538073 EDC4Q6P2E9 1401 aaKnown RBP11.09□□□□□ -0.63
CIT-209ENST00000538073 DDX17Q92841 729 aaKnown RBP11.09□□□□□ -0.63
CIT-209ENST00000538073 PANK3Q9H999 370 aa11.09□□□□□ -0.63
CIT-209ENST00000538073 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
CIT-209ENST00000538073 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
CIT-209ENST00000538073 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
CIT-209ENST00000538073 SBNO1A3KN83 1393 aa11.08□□□□□ -0.64
CIT-209ENST00000538073 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
CIT-209ENST00000538073 PSME1Q06323 249 aa11.08□□□□□ -0.64
CIT-209ENST00000538073 KRT28Q7Z3Y7 464 aa11.08□□□□□ -0.64
CIT-209ENST00000538073 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.64
CIT-209ENST00000538073 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
CIT-209ENST00000538073 TTC21BQ7Z4L5 1316 aa11.07□□□□□ -0.64
CIT-209ENST00000538073 PIK3C2AO00443 1686 aa11.06□□□□□ -0.64
CIT-209ENST00000538073 USP54Q70EL1 1684 aa11.06□□□□□ -0.64
CIT-209ENST00000538073 DDX10Q13206 875 aaKnown RBP11.06□□□□□ -0.64
CIT-209ENST00000538073 TNS3Q68CZ2 1445 aa11.06□□□□□ -0.64
CIT-209ENST00000538073 TTC21AQ8NDW8 1320 aa11.06□□□□□ -0.64
CIT-209ENST00000538073 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
CIT-209ENST00000538073 XPCQ01831 940 aaPredicted RBP11.05□□□□□ -0.64
CIT-209ENST00000538073 SPATA31A3Q5VYP0 1347 aa11.05□□□□□ -0.64
CIT-209ENST00000538073 MARF1Q9Y4F3 1742 aaKnown RBP11.04□□□□□ -0.64
CIT-209ENST00000538073 ZBTB22O15209 634 aa11.04□□□□□ -0.64
CIT-209ENST00000538073 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
CIT-209ENST00000538073 COL22A1Q8NFW1 1626 aaPredicted RBP11.03□□□□□ -0.64
CIT-209ENST00000538073 EVX2Q03828 476 aa11.03□□□□□ -0.64
CIT-209ENST00000538073 ILDR2Q71H61 639 aa11.03□□□□□ -0.64
CIT-209ENST00000538073 LRRC59Q96AG4 307 aaKnown RBP11.03□□□□□ -0.64
CIT-209ENST00000538073 KNSTRNQ9Y448 316 aa11.03□□□□□ -0.64
CIT-209ENST00000538073 ANKRD26Q9UPS8 1709 aa11.03□□□□□ -0.64
CIT-209ENST00000538073 CRYBG1Q9Y4K1 1723 aa11.03□□□□□ -0.64
CIT-209ENST00000538073 MED1Q15648 1581 aaPredicted RBP11.03□□□□□ -0.64
CIT-209ENST00000538073 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
CIT-209ENST00000538073 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
CIT-209ENST00000538073 SHPRHQ149N8 1683 aa11.02□□□□□ -0.64
CIT-209ENST00000538073 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
CIT-209ENST00000538073 FYB1O15117 783 aa11.02□□□□□ -0.65
CIT-209ENST00000538073 PAK3O75914 559 aaPredicted RBP11.02□□□□□ -0.65
CIT-209ENST00000538073 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
CIT-209ENST00000538073 HSPA1LP34931 641 aa11.02□□□□□ -0.65
CIT-209ENST00000538073 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
CIT-209ENST00000538073 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.65
CIT-209ENST00000538073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.02□□□□□ -0.65
CIT-209ENST00000538073 CGNL1Q0VF96 1302 aa11.02□□□□□ -0.65
CIT-209ENST00000538073 NSD2O96028 1365 aa11.02□□□□□ -0.65
CIT-209ENST00000538073 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
CIT-209ENST00000538073 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
CIT-209ENST00000538073 NME9Q86XW9 330 aa11.01□□□□□ -0.65
CIT-209ENST00000538073 ABTB2Q8N961 1025 aa11.01□□□□□ -0.65
CIT-209ENST00000538073 PNPLA6Q8IY17 1366 aa11.01□□□□□ -0.65
CIT-209ENST00000538073 SLIT3O75094 1523 aa11□□□□□ -0.65
CIT-209ENST00000538073 PHRF1Q9P1Y6 1649 aaKnown RBP11□□□□□ -0.65
CIT-209ENST00000538073 USP19O94966 1318 aa11□□□□□ -0.65
CIT-209ENST00000538073 ABCA3Q99758 1704 aa11□□□□□ -0.65
CIT-209ENST00000538073 NLRP13Q86W25 1043 aa10.99□□□□□ -0.65
CIT-209ENST00000538073 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
CIT-209ENST00000538073 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
CIT-209ENST00000538073 JCADQ9P266 1359 aa10.99□□□□□ -0.65
CIT-209ENST00000538073 ATXN8OSP0DMR3 200 aa10.98□□□□□ -0.65
CIT-209ENST00000538073 NLRP6P59044 892 aa10.98□□□□□ -0.65
CIT-209ENST00000538073 COG3Q96JB2 828 aa10.98□□□□□ -0.65
CIT-209ENST00000538073 NUTM2GQ5VZR2 741 aa10.97□□□□□ -0.65
CIT-209ENST00000538073 LMOD2Q6P5Q4 547 aa10.97□□□□□ -0.65
CIT-209ENST00000538073 CLEC11AQ9Y240 323 aa10.97□□□□□ -0.65
CIT-209ENST00000538073 NFAT5O94916 1531 aa10.97□□□□□ -0.65
CIT-209ENST00000538073 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms