RNA–Protein interactions for RNA: ENST00000538051.5

LMO3-219, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 579 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-219ENST00000538051 USP6P35125 1406 aa16.96■□□□□ 0.31
LMO3-219ENST00000538051 RALBP1Q15311 655 aa16.96■□□□□ 0.31
LMO3-219ENST00000538051 ANKRD26Q9UPS8 1709 aa16.96■□□□□ 0.3
LMO3-219ENST00000538051 ACEP12821 1306 aa16.96■□□□□ 0.3
LMO3-219ENST00000538051 NGDNQ8NEJ9 315 aaKnown RBP16.95■□□□□ 0.3
LMO3-219ENST00000538051 KIF20BQ96Q89 1820 aa16.95■□□□□ 0.3
LMO3-219ENST00000538051 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
LMO3-219ENST00000538051 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
LMO3-219ENST00000538051 USP54Q70EL1 1684 aa16.94■□□□□ 0.3
LMO3-219ENST00000538051 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
LMO3-219ENST00000538051 NPHP3Q7Z494 1330 aa16.93■□□□□ 0.3
LMO3-219ENST00000538051 CARD14Q9BXL6 1004 aa16.92■□□□□ 0.3
LMO3-219ENST00000538051 PARD3Q8TEW0 1356 aa16.91■□□□□ 0.3
LMO3-219ENST00000538051 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
LMO3-219ENST00000538051 PSME1Q06323 249 aa16.9■□□□□ 0.3
LMO3-219ENST00000538051 PRKRIP1Q9H875 184 aaPredicted RBP16.9■□□□□ 0.3
LMO3-219ENST00000538051 NHSL1Q5SYE7 1610 aa16.89■□□□□ 0.29
LMO3-219ENST00000538051 NUTM2BA6NNL0 878 aaPredicted RBP16.89■□□□□ 0.29
LMO3-219ENST00000538051 NUTM2EB1AL46 878 aaPredicted RBP16.89■□□□□ 0.29
LMO3-219ENST00000538051 NUTM2AQ8IVF1 878 aaPredicted RBP16.89■□□□□ 0.29
LMO3-219ENST00000538051 SPATA31A6Q5VVP1 1343 aa16.89■□□□□ 0.29
LMO3-219ENST00000538051 SBNO1A3KN83 1393 aa16.89■□□□□ 0.29
LMO3-219ENST00000538051 COL16A1Q07092 1604 aaPredicted RBP16.88■□□□□ 0.29
LMO3-219ENST00000538051 ZNF772Q68DY9 489 aaPredicted RBP16.88■□□□□ 0.29
LMO3-219ENST00000538051 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
LMO3-219ENST00000538051 TTC21BQ7Z4L5 1316 aa16.88■□□□□ 0.29
LMO3-219ENST00000538051 USP31Q70CQ4 1352 aa16.88■□□□□ 0.29
LMO3-219ENST00000538051 TRPM3Q9HCF6 1732 aaPredicted RBP16.87■□□□□ 0.29
LMO3-219ENST00000538051 CCER2I3L3R5 266 aa16.87■□□□□ 0.29
LMO3-219ENST00000538051 BRINP3Q76B58 766 aa16.87■□□□□ 0.29
LMO3-219ENST00000538051 ORAI2Q96SN7 254 aa16.87■□□□□ 0.29
LMO3-219ENST00000538051 AHDC1Q5TGY3 1603 aaPredicted RBP16.87■□□□□ 0.29
LMO3-219ENST00000538051 FYB1O15117 783 aa16.85■□□□□ 0.29
LMO3-219ENST00000538051 MYBBP1AQ9BQG0 1328 aaKnown RBP16.85■□□□□ 0.29
LMO3-219ENST00000538051 OVOS2A0A0J9YW53 1432 aa16.85■□□□□ 0.29
LMO3-219ENST00000538051 OVOS2Q6IE36 1432 aa16.85■□□□□ 0.29
LMO3-219ENST00000538051 ARHGEF10O15013 1369 aa16.84■□□□□ 0.29
LMO3-219ENST00000538051 PXDNQ92626 1479 aa16.84■□□□□ 0.29
LMO3-219ENST00000538051 LRP6O75581 1613 aa16.84■□□□□ 0.29
LMO3-219ENST00000538051 PIK3C2AO00443 1686 aa16.84■□□□□ 0.29
LMO3-219ENST00000538051 ALS2Q96Q42 1657 aa16.84■□□□□ 0.29
LMO3-219ENST00000538051 FOXO3O43524 673 aa16.83■□□□□ 0.28
LMO3-219ENST00000538051 SOS2Q07890 1332 aaPredicted RBP16.83■□□□□ 0.28
LMO3-219ENST00000538051 AATKQ6ZMQ8 1374 aa16.83■□□□□ 0.28
LMO3-219ENST00000538051 NLRP13Q86W25 1043 aa16.83■□□□□ 0.28
LMO3-219ENST00000538051 COG3Q96JB2 828 aa16.83■□□□□ 0.28
LMO3-219ENST00000538051 RXRBP28702 533 aa16.82■□□□□ 0.28
LMO3-219ENST00000538051 KRT28Q7Z3Y7 464 aa16.82■□□□□ 0.28
LMO3-219ENST00000538051 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
LMO3-219ENST00000538051 TNS3Q68CZ2 1445 aa16.81■□□□□ 0.28
LMO3-219ENST00000538051 SHPRHQ149N8 1683 aa16.81■□□□□ 0.28
LMO3-219ENST00000538051 KIF24Q5T7B8 1368 aa16.8■□□□□ 0.28
LMO3-219ENST00000538051 CC2D1BQ5T0F9 858 aaKnown RBP16.8■□□□□ 0.28
LMO3-219ENST00000538051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.79■□□□□ 0.28
LMO3-219ENST00000538051 UPF1Q92900 1129 aaKnown RBP eCLIP16.79■□□□□ 0.28
LMO3-219ENST00000538051 ABTB2Q8N961 1025 aa16.78■□□□□ 0.28
LMO3-219ENST00000538051 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
LMO3-219ENST00000538051 SPATA31A3Q5VYP0 1347 aa16.77■□□□□ 0.28
LMO3-219ENST00000538051 SLIT3O75094 1523 aa16.77■□□□□ 0.28
LMO3-219ENST00000538051 NME9Q86XW9 330 aa16.77■□□□□ 0.28
LMO3-219ENST00000538051 KCNH5Q8NCM2 988 aa16.77■□□□□ 0.28
LMO3-219ENST00000538051 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
LMO3-219ENST00000538051 AFF2P51816 1311 aa16.76■□□□□ 0.27
LMO3-219ENST00000538051 MIER1Q8N108 512 aa16.76■□□□□ 0.27
LMO3-219ENST00000538051 DDX17Q92841 729 aaKnown RBP16.76■□□□□ 0.27
LMO3-219ENST00000538051 LRRC59Q96AG4 307 aaKnown RBP16.76■□□□□ 0.27
LMO3-219ENST00000538051 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
LMO3-219ENST00000538051 PHRF1Q9P1Y6 1649 aaKnown RBP16.76■□□□□ 0.27
LMO3-219ENST00000538051 ABCC6O95255 1503 aa16.75■□□□□ 0.27
LMO3-219ENST00000538051 USP19O94966 1318 aa16.75■□□□□ 0.27
LMO3-219ENST00000538051 PAK3O75914 559 aaPredicted RBP16.75■□□□□ 0.27
LMO3-219ENST00000538051 NLRP6P59044 892 aa16.75■□□□□ 0.27
LMO3-219ENST00000538051 C8orf37Q96NL8 207 aa16.75■□□□□ 0.27
LMO3-219ENST00000538051 INSRP06213 1382 aa16.75■□□□□ 0.27
LMO3-219ENST00000538051 PPP2R1AP30153 589 aa16.74■□□□□ 0.27
LMO3-219ENST00000538051 MAP2P11137 1827 aaKnown RBP16.73■□□□□ 0.27
LMO3-219ENST00000538051 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
LMO3-219ENST00000538051 COL22A1Q8NFW1 1626 aaPredicted RBP16.73■□□□□ 0.27
LMO3-219ENST00000538051 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
LMO3-219ENST00000538051 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
LMO3-219ENST00000538051 CRYBG1Q9Y4K1 1723 aa16.72■□□□□ 0.27
LMO3-219ENST00000538051 NFAT5O94916 1531 aa16.71■□□□□ 0.27
LMO3-219ENST00000538051 ADAMTS2O95450 1211 aa16.71■□□□□ 0.27
LMO3-219ENST00000538051 QTRT2Q9H974 415 aaKnown RBP16.71■□□□□ 0.27
LMO3-219ENST00000538051 PNPLA6Q8IY17 1366 aa16.71■□□□□ 0.27
LMO3-219ENST00000538051 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
LMO3-219ENST00000538051 CPDO75976 1380 aa16.68■□□□□ 0.26
LMO3-219ENST00000538051 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
LMO3-219ENST00000538051 FLT4P35916 1363 aa16.67■□□□□ 0.26
LMO3-219ENST00000538051 XPCQ01831 940 aaPredicted RBP16.67■□□□□ 0.26
LMO3-219ENST00000538051 ABCA3Q99758 1704 aa16.67■□□□□ 0.26
LMO3-219ENST00000538051 LTN1O94822 1766 aa16.66■□□□□ 0.26
LMO3-219ENST00000538051 GCP02774 474 aa16.66■□□□□ 0.26
LMO3-219ENST00000538051 MTHFSP49914 203 aa16.66■□□□□ 0.26
LMO3-219ENST00000538051 RBM6P78332 1123 aaKnown RBP16.66■□□□□ 0.26
LMO3-219ENST00000538051 POLKQ9UBT6 870 aa16.66■□□□□ 0.26
LMO3-219ENST00000538051 BLMP54132 1417 aaPredicted RBP16.65■□□□□ 0.26
LMO3-219ENST00000538051 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
LMO3-219ENST00000538051 ZRANB1Q9UGI0 708 aa16.64■□□□□ 0.25
LMO3-219ENST00000538051 NUDCQ9Y266 331 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms