RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, human

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGA2-208	ENST00000537429	SOS2	Q07890	1332 aa	Predicted RBP	33.29	■■■□□ 2.92
HMGA2-208	ENST00000537429	TTC21B	Q7Z4L5	1316 aa		33.28	■■■□□ 2.92
HMGA2-208	ENST00000537429	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.28	■■■□□ 2.92
HMGA2-208	ENST00000537429	KNSTRN	Q9Y448	316 aa		33.28	■■■□□ 2.92
HMGA2-208	ENST00000537429	TTC21A	Q8NDW8	1320 aa		33.24	■■■□□ 2.91
HMGA2-208	ENST00000537429	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.24	■■■□□ 2.91	2e-8	■■□□□ 14
HMGA2-208	ENST00000537429	SBNO1	A3KN83	1393 aa		33.24	■■■□□ 2.91
HMGA2-208	ENST00000537429	PAK3	O75914	559 aa	Predicted RBP	33.23	■■■□□ 2.91
HMGA2-208	ENST00000537429	CGNL1	Q0VF96	1302 aa		33.22	■■■□□ 2.91
HMGA2-208	ENST00000537429	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.22	■■■□□ 2.91
HMGA2-208	ENST00000537429	FYB1	O15117	783 aa		33.19	■■■□□ 2.9
HMGA2-208	ENST00000537429	PHLPP1	O60346	1717 aa		33.19	■■■□□ 2.9
HMGA2-208	ENST00000537429	SPATA31A3	Q5VYP0	1347 aa		33.18	■■■□□ 2.9
HMGA2-208	ENST00000537429	ALS2	Q96Q42	1657 aa		33.18	■■■□□ 2.9
HMGA2-208	ENST00000537429	NME9	Q86XW9	330 aa		33.18	■■■□□ 2.9
HMGA2-208	ENST00000537429	NPC1L1	Q9UHC9	1359 aa		33.17	■■■□□ 2.9
HMGA2-208	ENST00000537429	PIK3C2A	O00443	1686 aa		33.16	■■■□□ 2.9
HMGA2-208	ENST00000537429	TNS3	Q68CZ2	1445 aa		33.16	■■■□□ 2.9
HMGA2-208	ENST00000537429	COL16A1	Q07092	1604 aa	Predicted RBP	33.16	■■■□□ 2.9
HMGA2-208	ENST00000537429	KIF20B	Q96Q89	1820 aa		33.16	■■■□□ 2.9
HMGA2-208	ENST00000537429	ABTB2	Q8N961	1025 aa		33.16	■■■□□ 2.9
HMGA2-208	ENST00000537429	LMOD2	Q6P5Q4	547 aa		33.15	■■■□□ 2.9
HMGA2-208	ENST00000537429	NSD2	O96028	1365 aa		33.13	■■■□□ 2.89
HMGA2-208	ENST00000537429	FBXO41	Q8TF61	875 aa		33.13	■■■□□ 2.89
HMGA2-208	ENST00000537429	LRRC59	Q96AG4	307 aa	Known RBP	33.13	■■■□□ 2.89
HMGA2-208	ENST00000537429	GGNBP2	Q9H3C7	697 aa		33.12	■■■□□ 2.89
HMGA2-208	ENST00000537429	USP31	Q70CQ4	1352 aa		33.12	■■■□□ 2.89
HMGA2-208	ENST00000537429	ZRANB1	Q9UGI0	708 aa		33.12	■■■□□ 2.89
HMGA2-208	ENST00000537429	CC2D1B	Q5T0F9	858 aa	Known RBP	33.1	■■■□□ 2.89
HMGA2-208	ENST00000537429	ARHGEF10	O15013	1369 aa		33.1	■■■□□ 2.89
HMGA2-208	ENST00000537429	NLRP6	P59044	892 aa		33.09	■■■□□ 2.89
HMGA2-208	ENST00000537429	OVOS2	A0A0J9YW53	1432 aa		33.09	■■■□□ 2.89
HMGA2-208	ENST00000537429	OVOS2	Q6IE36	1432 aa		33.09	■■■□□ 2.89
HMGA2-208	ENST00000537429	DIEXF	Q68CQ4	756 aa	Known RBP	33.08	■■■□□ 2.89
HMGA2-208	ENST00000537429	USP54	Q70EL1	1684 aa		33.08	■■■□□ 2.89
HMGA2-208	ENST00000537429	ANKRD26	Q9UPS8	1709 aa		33.08	■■■□□ 2.89
HMGA2-208	ENST00000537429	HSPA1L	P34931	641 aa		33.07	■■■□□ 2.89
HMGA2-208	ENST00000537429	NUTM2G	Q5VZR2	741 aa		33.07	■■■□□ 2.89
HMGA2-208	ENST00000537429	NLRP13	Q86W25	1043 aa		33.07	■■■□□ 2.88
HMGA2-208	ENST00000537429	MARF1	Q9Y4F3	1742 aa	Known RBP	33.06	■■■□□ 2.88
HMGA2-208	ENST00000537429	COG3	Q96JB2	828 aa		33.06	■■■□□ 2.88
HMGA2-208	ENST00000537429	CNGB1	Q14028	1251 aa	Predicted RBP	33.05	■■■□□ 2.88
HMGA2-208	ENST00000537429	PLEKHG5	O94827	1062 aa		33.03	■■■□□ 2.88
HMGA2-208	ENST00000537429	PNPLA6	Q8IY17	1366 aa		33	■■■□□ 2.87
HMGA2-208	ENST00000537429	MED1	Q15648	1581 aa	Predicted RBP	33	■■■□□ 2.87
HMGA2-208	ENST00000537429	USP19	O94966	1318 aa		33	■■■□□ 2.87
HMGA2-208	ENST00000537429	MORC1	Q86VD1	984 aa		33	■■■□□ 2.87
HMGA2-208	ENST00000537429	PARD3	Q8TEW0	1356 aa		32.99	■■■□□ 2.87
HMGA2-208	ENST00000537429	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.98	■■■□□ 2.87
HMGA2-208	ENST00000537429	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.97	■■■□□ 2.87
HMGA2-208	ENST00000537429	SLIT3	O75094	1523 aa		32.97	■■■□□ 2.87
HMGA2-208	ENST00000537429	CRYBG1	Q9Y4K1	1723 aa		32.97	■■■□□ 2.87
HMGA2-208	ENST00000537429	ANP32C	O43423	234 aa		32.95	■■■□□ 2.87
HMGA2-208	ENST00000537429	RALBP1	Q15311	655 aa		32.95	■■■□□ 2.87
HMGA2-208	ENST00000537429	CABLES1	Q8TDN4	633 aa		32.94	■■■□□ 2.86
HMGA2-208	ENST00000537429	JCAD	Q9P266	1359 aa		32.94	■■■□□ 2.86
HMGA2-208	ENST00000537429	SHPRH	Q149N8	1683 aa		32.94	■■■□□ 2.86
HMGA2-208	ENST00000537429	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.94	■■■□□ 2.86
HMGA2-208	ENST00000537429	GC	P02774	474 aa		32.92	■■■□□ 2.86
HMGA2-208	ENST00000537429	KCNH5	Q8NCM2	988 aa		32.92	■■■□□ 2.86
HMGA2-208	ENST00000537429	TNNT2	P45379	298 aa	Predicted RBP	32.91	■■■□□ 2.86
HMGA2-208	ENST00000537429	ABCA3	Q99758	1704 aa		32.9	■■■□□ 2.86
HMGA2-208	ENST00000537429	HAP1	P54257	671 aa	Predicted RBP	32.9	■■■□□ 2.86
HMGA2-208	ENST00000537429	AATK	Q6ZMQ8	1374 aa		32.89	■■■□□ 2.86
HMGA2-208	ENST00000537429	SOX12	O15370	315 aa		32.89	■■■□□ 2.86
HMGA2-208	ENST00000537429	FBLN1	P23142	703 aa		32.89	■■■□□ 2.86
HMGA2-208	ENST00000537429	NFAT5	O94916	1531 aa		32.89	■■■□□ 2.86
HMGA2-208	ENST00000537429	PPP2R1A	P30153	589 aa		32.84	■■■□□ 2.85
HMGA2-208	ENST00000537429	MAP2	P11137	1827 aa	Known RBP	32.83	■■■□□ 2.85
HMGA2-208	ENST00000537429	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.82	■■■□□ 2.85
HMGA2-208	ENST00000537429	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.82	■■■□□ 2.85
HMGA2-208	ENST00000537429	NUTM2E	B1AL46	878 aa	Predicted RBP	32.82	■■■□□ 2.85
HMGA2-208	ENST00000537429	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.82	■■■□□ 2.85
HMGA2-208	ENST00000537429	POLK	Q9UBT6	870 aa		32.82	■■■□□ 2.85
HMGA2-208	ENST00000537429	RRS1	Q15050	365 aa	Known RBP	32.82	■■■□□ 2.84
HMGA2-208	ENST00000537429	SPATA31A6	Q5VVP1	1343 aa		32.81	■■■□□ 2.84
HMGA2-208	ENST00000537429	ZC3H6	P61129	1189 aa	Known RBP	32.8	■■■□□ 2.84
HMGA2-208	ENST00000537429	ARHGEF25	Q86VW2	580 aa		32.8	■■■□□ 2.84
HMGA2-208	ENST00000537429	MAP3K19	Q56UN5	1328 aa		32.79	■■■□□ 2.84
HMGA2-208	ENST00000537429	CPD	O75976	1380 aa		32.79	■■■□□ 2.84
HMGA2-208	ENST00000537429	EMILIN1	Q9Y6C2	1016 aa		32.77	■■■□□ 2.84
HMGA2-208	ENST00000537429	SMG6	Q86US8	1419 aa	Known RBP	32.77	■■■□□ 2.84
HMGA2-208	ENST00000537429	LTN1	O94822	1766 aa		32.77	■■■□□ 2.84
HMGA2-208	ENST00000537429	ZBTB7C	A1YPR0	619 aa		32.77	■■■□□ 2.84
HMGA2-208	ENST00000537429	MTHFS	P49914	203 aa		32.77	■■■□□ 2.84
HMGA2-208	ENST00000537429	KIAA0232	Q92628	1395 aa		32.75	■■■□□ 2.83
HMGA2-208	ENST00000537429	MIER1	Q8N108	512 aa		32.74	■■■□□ 2.83
HMGA2-208	ENST00000537429	KIF24	Q5T7B8	1368 aa		32.73	■■■□□ 2.83
HMGA2-208	ENST00000537429	PEAK1	Q9H792	1746 aa		32.73	■■■□□ 2.83
HMGA2-208	ENST00000537429	ADAMTS2	O95450	1211 aa		32.72	■■■□□ 2.83
HMGA2-208	ENST00000537429	ILDR1	Q86SU0	546 aa	Predicted RBP	32.72	■■■□□ 2.83
HMGA2-208	ENST00000537429	PPM1G	O15355	546 aa	Predicted RBP	32.71	■■■□□ 2.83
HMGA2-208	ENST00000537429	AMPH	P49418	695 aa		32.71	■■■□□ 2.83
HMGA2-208	ENST00000537429	PRDM11	Q9NQV5	511 aa		32.7	■■■□□ 2.83
HMGA2-208	ENST00000537429	LRP6	O75581	1613 aa		32.69	■■■□□ 2.82
HMGA2-208	ENST00000537429	RTL1	A6NKG5	1358 aa		32.69	■■■□□ 2.82
HMGA2-208	ENST00000537429	COL18A1	P39060	1754 aa		32.69	■■■□□ 2.82
HMGA2-208	ENST00000537429	FLT4	P35916	1363 aa		32.69	■■■□□ 2.82
HMGA2-208	ENST00000537429	HOXC9	P31274	260 aa		32.68	■■■□□ 2.82
HMGA2-208	ENST00000537429	IP6K1	Q92551	441 aa		32.68	■■■□□ 2.82

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