RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
SMG6-203ENST00000536871 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
SMG6-203ENST00000536871 DIAPH1O60610 1272 aaKnown RBP17.66■□□□□ 0.42
SMG6-203ENST00000536871 C3P01024 1663 aa17.66■□□□□ 0.42
SMG6-203ENST00000536871 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
SMG6-203ENST00000536871 AAMPQ13685 434 aa17.65■□□□□ 0.42
SMG6-203ENST00000536871 FER1L4A9Z1Z3 1794 aa17.64■□□□□ 0.41
SMG6-203ENST00000536871 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
SMG6-203ENST00000536871 TCERG1O14776 1098 aaKnown RBP17.63■□□□□ 0.41
SMG6-203ENST00000536871 PDE3AQ14432 1141 aa17.63■□□□□ 0.41
SMG6-203ENST00000536871 CRBNQ96SW2 442 aa17.63■□□□□ 0.41
SMG6-203ENST00000536871 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
SMG6-203ENST00000536871 IL16Q14005 1332 aa17.63■□□□□ 0.41
SMG6-203ENST00000536871 FCHSD2O94868 740 aa17.63■□□□□ 0.41
SMG6-203ENST00000536871 NEFMP07197 916 aa17.63■□□□□ 0.41
SMG6-203ENST00000536871 ROBO2Q9HCK4 1378 aa17.62■□□□□ 0.41
SMG6-203ENST00000536871 PLIN1O60240 522 aa17.61■□□□□ 0.41
SMG6-203ENST00000536871 LTKP29376 864 aa17.61■□□□□ 0.41
SMG6-203ENST00000536871 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
SMG6-203ENST00000536871 PIK3R4Q99570 1358 aa17.61■□□□□ 0.41
SMG6-203ENST00000536871 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
SMG6-203ENST00000536871 MS4A1P11836 297 aa17.61■□□□□ 0.41
SMG6-203ENST00000536871 PLEKHF1Q96S99 279 aa17.61■□□□□ 0.41
SMG6-203ENST00000536871 COG3Q96JB2 828 aa17.6■□□□□ 0.41
SMG6-203ENST00000536871 MON2Q7Z3U7 1717 aa17.6■□□□□ 0.41
SMG6-203ENST00000536871 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
SMG6-203ENST00000536871 PLEKHG3A1L390 1219 aa17.59■□□□□ 0.41
SMG6-203ENST00000536871 TRHP20396 242 aaPredicted RBP17.59■□□□□ 0.41
SMG6-203ENST00000536871 CENPQQ7L2Z9 268 aaPredicted RBP17.58■□□□□ 0.41
SMG6-203ENST00000536871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.58■□□□□ 0.41
SMG6-203ENST00000536871 CEBPAP49715 358 aaPredicted RBP17.58■□□□□ 0.4
SMG6-203ENST00000536871 POLKQ9UBT6 870 aa17.58■□□□□ 0.4
SMG6-203ENST00000536871 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
SMG6-203ENST00000536871 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
SMG6-203ENST00000536871 AKAP12Q02952 1782 aa17.57■□□□□ 0.4
SMG6-203ENST00000536871 ITSN1Q15811 1721 aa17.57■□□□□ 0.4
SMG6-203ENST00000536871 CALD1Q05682 793 aaKnown RBP17.56■□□□□ 0.4
SMG6-203ENST00000536871 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
SMG6-203ENST00000536871 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
SMG6-203ENST00000536871 TOPAZ1Q8N9V7 1692 aa17.54■□□□□ 0.4
SMG6-203ENST00000536871 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
SMG6-203ENST00000536871 AMOTL2Q9Y2J4 779 aa17.54■□□□□ 0.4
SMG6-203ENST00000536871 RARSP54136 660 aaKnown RBP17.53■□□□□ 0.4
SMG6-203ENST00000536871 C20orf194Q5TEA3 1177 aa17.53■□□□□ 0.4
SMG6-203ENST00000536871 PRR36Q9H6K5 1346 aa17.53■□□□□ 0.4
SMG6-203ENST00000536871 PTPRUQ92729 1446 aa17.53■□□□□ 0.4
SMG6-203ENST00000536871 TTC21AQ8NDW8 1320 aa17.52■□□□□ 0.4
SMG6-203ENST00000536871 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.52■□□□□ 0.4
SMG6-203ENST00000536871 NME9Q86XW9 330 aa17.52■□□□□ 0.39
SMG6-203ENST00000536871 ZNF428Q96B54 188 aa17.52■□□□□ 0.39
SMG6-203ENST00000536871 KDM2BQ8NHM5 1336 aa17.52■□□□□ 0.39
SMG6-203ENST00000536871 CEP170BQ9Y4F5 1589 aaPredicted RBP17.52■□□□□ 0.39
SMG6-203ENST00000536871 ANKARQ7Z5J8 1434 aa17.51■□□□□ 0.39
SMG6-203ENST00000536871 BCAR3O75815 825 aa17.51■□□□□ 0.39
SMG6-203ENST00000536871 USP6P35125 1406 aa17.5■□□□□ 0.39
SMG6-203ENST00000536871 TTC21BQ7Z4L5 1316 aa17.5■□□□□ 0.39
SMG6-203ENST00000536871 RIPK4P57078 832 aa17.5■□□□□ 0.39
SMG6-203ENST00000536871 LMOD3Q0VAK6 560 aa17.5■□□□□ 0.39
SMG6-203ENST00000536871 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
SMG6-203ENST00000536871 SLC26A8Q96RN1 970 aa17.5■□□□□ 0.39
SMG6-203ENST00000536871 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
SMG6-203ENST00000536871 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
SMG6-203ENST00000536871 ACEP12821 1306 aa17.49■□□□□ 0.39
SMG6-203ENST00000536871 IL13P35225 146 aa17.49■□□□□ 0.39
SMG6-203ENST00000536871 NRKQ7Z2Y5 1582 aa17.49■□□□□ 0.39
SMG6-203ENST00000536871 XRN1Q8IZH2 1706 aaKnown RBP17.49■□□□□ 0.39
SMG6-203ENST00000536871 LRRC7Q96NW7 1537 aa17.48■□□□□ 0.39
SMG6-203ENST00000536871 OVOS2A0A0J9YW53 1432 aa17.47■□□□□ 0.39
SMG6-203ENST00000536871 OVOS2Q6IE36 1432 aa17.47■□□□□ 0.39
SMG6-203ENST00000536871 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
SMG6-203ENST00000536871 PRKAR2BP31323 418 aa17.47■□□□□ 0.39
SMG6-203ENST00000536871 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
SMG6-203ENST00000536871 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
SMG6-203ENST00000536871 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
SMG6-203ENST00000536871 SSH2Q76I76 1423 aa17.46■□□□□ 0.38
SMG6-203ENST00000536871 ANKLE2Q86XL3 938 aa17.46■□□□□ 0.38
SMG6-203ENST00000536871 MAP2P11137 1827 aaKnown RBP17.45■□□□□ 0.38
SMG6-203ENST00000536871 CLUAP1Q96AJ1 413 aa17.45■□□□□ 0.38
SMG6-203ENST00000536871 EMILIN1Q9Y6C2 1016 aa17.45■□□□□ 0.38
SMG6-203ENST00000536871 ZNF142P52746 1687 aaPredicted RBP17.45■□□□□ 0.38
SMG6-203ENST00000536871 ANP32AP39687 249 aaKnown RBP17.44■□□□□ 0.38
SMG6-203ENST00000536871 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
SMG6-203ENST00000536871 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
SMG6-203ENST00000536871 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
SMG6-203ENST00000536871 NCKAP5LQ9HCH0 1330 aa17.43■□□□□ 0.38
SMG6-203ENST00000536871 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
SMG6-203ENST00000536871 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
SMG6-203ENST00000536871 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
SMG6-203ENST00000536871 NALCNQ8IZF0 1738 aa17.42■□□□□ 0.38
SMG6-203ENST00000536871 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
SMG6-203ENST00000536871 GNAI1P63096 354 aa17.41■□□□□ 0.38
SMG6-203ENST00000536871 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
SMG6-203ENST00000536871 EXOSC9Q06265 439 aaKnown RBP17.41■□□□□ 0.38
SMG6-203ENST00000536871 IFT57Q9NWB7 429 aa17.41■□□□□ 0.38
SMG6-203ENST00000536871 ADAMTSL3P82987 1691 aa17.4■□□□□ 0.38
SMG6-203ENST00000536871 PDE4AP27815 886 aa17.4■□□□□ 0.38
SMG6-203ENST00000536871 NGDNQ8NEJ9 315 aaKnown RBP17.4■□□□□ 0.38
SMG6-203ENST00000536871 BACH2Q9BYV9 841 aa17.4■□□□□ 0.38
SMG6-203ENST00000536871 PRKCSHP14314 528 aaPredicted RBP17.39■□□□□ 0.38
SMG6-203ENST00000536871 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms