RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 CLCN1P35523 988 aa9.61□□□□□ -0.87
KNTC1-209ENST00000536625 ZNF511Q8NB15 262 aa9.61□□□□□ -0.87
KNTC1-209ENST00000536625 KLF16Q9BXK1 252 aaPredicted RBP9.61□□□□□ -0.87
KNTC1-209ENST00000536625 WDR4P57081 412 aaKnown RBP9.6□□□□□ -0.87
KNTC1-209ENST00000536625 KCNH2Q12809 1159 aa9.6□□□□□ -0.87
KNTC1-209ENST00000536625 NDUFV2P19404 249 aa9.59□□□□□ -0.87
KNTC1-209ENST00000536625 GSK3AP49840 483 aa9.59□□□□□ -0.87
KNTC1-209ENST00000536625 MPNDQ8N594 471 aa9.59□□□□□ -0.87
KNTC1-209ENST00000536625 VARSP26640 1264 aaKnown RBP9.58□□□□□ -0.88
KNTC1-209ENST00000536625 SUZ12Q15022 739 aaKnown RBP9.58□□□□□ -0.88
KNTC1-209ENST00000536625 PLEKHG3A1L390 1219 aa9.57□□□□□ -0.88
KNTC1-209ENST00000536625 ADH1CP00326 375 aa9.57□□□□□ -0.88
KNTC1-209ENST00000536625 SCARF1Q14162 830 aa9.57□□□□□ -0.88
KNTC1-209ENST00000536625 PRR7Q8TB68 274 aa9.57□□□□□ -0.88
KNTC1-209ENST00000536625 SPIRE2Q8WWL2 714 aa9.57□□□□□ -0.88
KNTC1-209ENST00000536625 MOXD2PA6NHM9 499 aa9.56□□□□□ -0.88
KNTC1-209ENST00000536625 ZFAND3Q9H8U3 227 aa9.55□□□□□ -0.88
KNTC1-209ENST00000536625 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
KNTC1-209ENST00000536625 SSTR3P32745 418 aaPredicted RBP9.52□□□□□ -0.89
KNTC1-209ENST00000536625 KCNMA1Q12791 1236 aa9.52□□□□□ -0.89
KNTC1-209ENST00000536625 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
KNTC1-209ENST00000536625 FOXJ1Q92949 421 aa9.52□□□□□ -0.89
KNTC1-209ENST00000536625 ITPKCQ96DU7 683 aa9.52□□□□□ -0.89
KNTC1-209ENST00000536625 PPFIA3O75145 1194 aa9.51□□□□□ -0.89
KNTC1-209ENST00000536625 ZIC2O95409 532 aaPredicted RBP9.51□□□□□ -0.89
KNTC1-209ENST00000536625 NR3C2P08235 984 aa9.51□□□□□ -0.89
KNTC1-209ENST00000536625 DESI1Q6ICB0 168 aa9.51□□□□□ -0.89
KNTC1-209ENST00000536625 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
KNTC1-209ENST00000536625 CDK15Q96Q40 435 aa9.51□□□□□ -0.89
KNTC1-209ENST00000536625 MTMR2Q13614 643 aa9.5□□□□□ -0.89
KNTC1-209ENST00000536625 FAM174AQ8TBP5 190 aa9.5□□□□□ -0.89
KNTC1-209ENST00000536625 MAN1A2O60476 641 aa9.49□□□□□ -0.89
KNTC1-209ENST00000536625 ARID5BQ14865 1188 aa9.49□□□□□ -0.89
KNTC1-209ENST00000536625 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
KNTC1-209ENST00000536625 SLC24A3Q9HC58 644 aa9.49□□□□□ -0.89
KNTC1-209ENST00000536625 CTHP32929 405 aa9.48□□□□□ -0.89
KNTC1-209ENST00000536625 KRT76Q01546 638 aa9.48□□□□□ -0.89
KNTC1-209ENST00000536625 LYPD8Q6UX82 237 aa9.48□□□□□ -0.89
KNTC1-209ENST00000536625 MAP10Q9P2G4 905 aa9.48□□□□□ -0.89
KNTC1-209ENST00000536625 CFAP99D6REC4 459 aa9.47□□□□□ -0.89
KNTC1-209ENST00000536625 GRM5P41594 1212 aa9.47□□□□□ -0.89
KNTC1-209ENST00000536625 TRIM66O15016 1216 aa9.46□□□□□ -0.9
KNTC1-209ENST00000536625 GPR161Q8N6U8 529 aaKnown RBP9.46□□□□□ -0.9
KNTC1-209ENST00000536625 AK7Q96M32 723 aa9.46□□□□□ -0.9
KNTC1-209ENST00000536625 DNMT3LQ9UJW3 386 aa9.46□□□□□ -0.9
KNTC1-209ENST00000536625 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
KNTC1-209ENST00000536625 F12P00748 615 aaPredicted RBP9.45□□□□□ -0.9
KNTC1-209ENST00000536625 BMP2P12643 396 aa9.44□□□□□ -0.9
KNTC1-209ENST00000536625 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
KNTC1-209ENST00000536625 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
KNTC1-209ENST00000536625 SOS2Q07890 1332 aaPredicted RBP9.44□□□□□ -0.9
KNTC1-209ENST00000536625 NR5A1Q13285 461 aa9.43□□□□□ -0.9
KNTC1-209ENST00000536625 AMHR2Q16671 573 aa9.43□□□□□ -0.9
KNTC1-209ENST00000536625 TPRNQ4KMQ1 711 aa9.43□□□□□ -0.9
KNTC1-209ENST00000536625 MEIOBQ8N635 442 aa9.43□□□□□ -0.9
KNTC1-209ENST00000536625 RASSF7Q02833 373 aa9.42□□□□□ -0.9
KNTC1-209ENST00000536625 RSBN1LQ6PCB5 846 aaPredicted RBP9.41□□□□□ -0.9
KNTC1-209ENST00000536625 TMEM151AQ8N4L1 468 aa9.41□□□□□ -0.9
KNTC1-209ENST00000536625 GDF11O95390 407 aa9.4□□□□□ -0.9
KNTC1-209ENST00000536625 TTLL12Q14166 644 aaPredicted RBP9.4□□□□□ -0.9
KNTC1-209ENST00000536625 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.9
KNTC1-209ENST00000536625 CNTNAP3BQ96NU0 1288 aa9.4□□□□□ -0.9
KNTC1-209ENST00000536625 BEGAINQ9BUH8 593 aa9.4□□□□□ -0.9
KNTC1-209ENST00000536625 TBC1D2Q9BYX2 928 aa9.4□□□□□ -0.9
KNTC1-209ENST00000536625 CNTNAP3Q9BZ76 1288 aa9.4□□□□□ -0.9
KNTC1-209ENST00000536625 PER1O15534 1290 aaPredicted RBP9.39□□□□□ -0.91
KNTC1-209ENST00000536625 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
KNTC1-209ENST00000536625 AGERQ15109 404 aa9.39□□□□□ -0.91
KNTC1-209ENST00000536625 ADAMTS8Q9UP79 889 aa9.39□□□□□ -0.91
KNTC1-209ENST00000536625 HRCP23327 699 aa9.38□□□□□ -0.91
KNTC1-209ENST00000536625 GJA5P36382 358 aa9.38□□□□□ -0.91
KNTC1-209ENST00000536625 UPP2O95045 317 aa9.37□□□□□ -0.91
KNTC1-209ENST00000536625 PDE4DQ08499 809 aa9.37□□□□□ -0.91
KNTC1-209ENST00000536625 PARP9Q8IXQ6 854 aa9.37□□□□□ -0.91
KNTC1-209ENST00000536625 CABLES1Q8TDN4 633 aa9.37□□□□□ -0.91
KNTC1-209ENST00000536625 SPTLC1O15269 473 aa9.36□□□□□ -0.91
KNTC1-209ENST00000536625 FSHRP23945 695 aa9.36□□□□□ -0.91
KNTC1-209ENST00000536625 BPHLQ86WA6 291 aaPredicted RBP9.36□□□□□ -0.91
KNTC1-209ENST00000536625 C1QTNF2Q9BXJ5 285 aa9.36□□□□□ -0.91
KNTC1-209ENST00000536625 PTSQ03393 145 aa9.35□□□□□ -0.91
KNTC1-209ENST00000536625 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
KNTC1-209ENST00000536625 ZNF385CQ66K41 422 aaPredicted RBP9.35□□□□□ -0.91
KNTC1-209ENST00000536625 COL25A1Q9BXS0 654 aaPredicted RBP9.35□□□□□ -0.91
KNTC1-209ENST00000536625 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
KNTC1-209ENST00000536625 WHAMMQ8TF30 809 aa9.34□□□□□ -0.91
KNTC1-209ENST00000536625 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
KNTC1-209ENST00000536625 TTLL8A6PVC2 850 aa9.33□□□□□ -0.92
KNTC1-209ENST00000536625 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.33□□□□□ -0.92
KNTC1-209ENST00000536625 TSEN34Q9BSV6 310 aaKnown RBP9.33□□□□□ -0.92
KNTC1-209ENST00000536625 FIGNL2A6NMB9 653 aa9.32□□□□□ -0.92
KNTC1-209ENST00000536625 NANOS1Q8WY41 292 aaKnown RBP9.31□□□□□ -0.92
KNTC1-209ENST00000536625 MAP4K5Q9Y4K4 846 aa9.31□□□□□ -0.92
KNTC1-209ENST00000536625 CBLBQ13191 982 aa9.3□□□□□ -0.92
KNTC1-209ENST00000536625 CSPP1Q1MSJ5 1256 aa9.3□□□□□ -0.92
KNTC1-209ENST00000536625 VASH1Q7L8A9 365 aaPredicted RBP9.3□□□□□ -0.92
KNTC1-209ENST00000536625 SH3BP5LQ7L8J4 393 aa9.3□□□□□ -0.92
KNTC1-209ENST00000536625 RIC3Q7Z5B4 369 aa9.3□□□□□ -0.92
KNTC1-209ENST00000536625 CCDC155Q8N6L0 562 aa9.3□□□□□ -0.92
KNTC1-209ENST00000536625 RNF225M0QZC1 329 aaPredicted RBP9.29□□□□□ -0.92
KNTC1-209ENST00000536625 PRPF38BQ5VTL8 546 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms