RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
PTPN21-202ENST00000536337 MCM10Q7L590 875 aa15.96■□□□□ 0.15
PTPN21-202ENST00000536337 NINLQ9Y2I6 1382 aa15.96■□□□□ 0.15
PTPN21-202ENST00000536337 RPGRIP1LQ68CZ1 1315 aa15.96■□□□□ 0.15
PTPN21-202ENST00000536337 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.96■□□□□ 0.14
PTPN21-202ENST00000536337 ZMYM4Q5VZL5 1548 aa15.95■□□□□ 0.14
PTPN21-202ENST00000536337 ANO2Q9NQ90 1003 aa15.95■□□□□ 0.14
PTPN21-202ENST00000536337 PIK3C2GO75747 1445 aa15.95■□□□□ 0.14
PTPN21-202ENST00000536337 SMARCA5O60264 1052 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-202ENST00000536337 CDC45O75419 566 aa15.95■□□□□ 0.14
PTPN21-202ENST00000536337 CD109Q6YHK3 1445 aa15.94■□□□□ 0.14
PTPN21-202ENST00000536337 NFE2L2Q16236 605 aa15.94■□□□□ 0.14
PTPN21-202ENST00000536337 KIAA1211Q6ZU35 1233 aa15.94■□□□□ 0.14
PTPN21-202ENST00000536337 POLR3AO14802 1390 aaPredicted RBP15.93■□□□□ 0.14
PTPN21-202ENST00000536337 TSPYL6Q8N831 410 aa15.93■□□□□ 0.14
PTPN21-202ENST00000536337 SLC26A8Q96RN1 970 aa15.93■□□□□ 0.14
PTPN21-202ENST00000536337 CT47B1P0C2W7 299 aaPredicted RBP15.93■□□□□ 0.14
PTPN21-202ENST00000536337 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
PTPN21-202ENST00000536337 ZNF521Q96K83 1311 aa15.93■□□□□ 0.14
PTPN21-202ENST00000536337 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
PTPN21-202ENST00000536337 NAP1L2Q9ULW6 460 aaPredicted RBP15.93■□□□□ 0.14
PTPN21-202ENST00000536337 ADGBQ8N7X0 1667 aa15.93■□□□□ 0.14
PTPN21-202ENST00000536337 A0A0G2JS52 829 aa15.92■□□□□ 0.14
PTPN21-202ENST00000536337 GCC1Q96CN9 775 aa15.92■□□□□ 0.14
PTPN21-202ENST00000536337 NCKAP5LQ9HCH0 1330 aa15.92■□□□□ 0.14
PTPN21-202ENST00000536337 RSPH6AQ9H0K4 717 aa15.91■□□□□ 0.14
PTPN21-202ENST00000536337 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
PTPN21-202ENST00000536337 PANK2Q9BZ23 570 aa15.91■□□□□ 0.14
PTPN21-202ENST00000536337 MRE11P49959 708 aa15.9■□□□□ 0.14
PTPN21-202ENST00000536337 CAVIN1Q6NZI2 390 aaKnown RBP15.9■□□□□ 0.14
PTPN21-202ENST00000536337 SAMD9LQ8IVG5 1584 aa15.9■□□□□ 0.14
PTPN21-202ENST00000536337 WDR7Q9Y4E6 1490 aa15.9■□□□□ 0.14
PTPN21-202ENST00000536337 NEK4P51957 841 aa15.9■□□□□ 0.14
PTPN21-202ENST00000536337 FGD1P98174 961 aa15.9■□□□□ 0.14
PTPN21-202ENST00000536337 NUDT16Q96DE0 195 aaKnown RBP15.9■□□□□ 0.14
PTPN21-202ENST00000536337 CFAP44Q96MT7 982 aa15.9■□□□□ 0.14
PTPN21-202ENST00000536337 RNF214Q8ND24 703 aa15.9■□□□□ 0.14
PTPN21-202ENST00000536337 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
PTPN21-202ENST00000536337 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
PTPN21-202ENST00000536337 F6X3S4 739 aa15.89■□□□□ 0.14
PTPN21-202ENST00000536337 REC8O95072 547 aa15.89■□□□□ 0.14
PTPN21-202ENST00000536337 KRT24Q2M2I5 525 aa15.89■□□□□ 0.14
PTPN21-202ENST00000536337 ATAD2Q6PL18 1390 aa15.89■□□□□ 0.13
PTPN21-202ENST00000536337 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
PTPN21-202ENST00000536337 PRPF40AO75400 957 aaKnown RBP15.88■□□□□ 0.13
PTPN21-202ENST00000536337 NLRP6P59044 892 aa15.88■□□□□ 0.13
PTPN21-202ENST00000536337 SKOR2Q2VWA4 1001 aaPredicted RBP15.88■□□□□ 0.13
PTPN21-202ENST00000536337 TRMT2AQ8IZ69 625 aaKnown RBP15.88■□□□□ 0.13
PTPN21-202ENST00000536337 MBIPQ9NS73 344 aa15.88■□□□□ 0.13
PTPN21-202ENST00000536337 MPNDQ8N594 471 aa15.88■□□□□ 0.13
PTPN21-202ENST00000536337 EXOC6BQ9Y2D4 811 aa15.88■□□□□ 0.13
PTPN21-202ENST00000536337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.13
PTPN21-202ENST00000536337 K7ELQ4 463 aaPredicted RBP15.88■□□□□ 0.13
PTPN21-202ENST00000536337 ABCA8O94911 1581 aa15.88■□□□□ 0.13
PTPN21-202ENST00000536337 C16orf71Q8IYS4 520 aaPredicted RBP15.87■□□□□ 0.13
PTPN21-202ENST00000536337 GRPEL1Q9HAV7 217 aa15.87■□□□□ 0.13
PTPN21-202ENST00000536337 CCDC61Q9Y6R9 512 aa15.87■□□□□ 0.13
PTPN21-202ENST00000536337 TBC1D9Q6ZT07 1266 aa15.87■□□□□ 0.13
PTPN21-202ENST00000536337 C8orf58Q8NAV2 365 aa15.87■□□□□ 0.13
PTPN21-202ENST00000536337 TNPO1Q92973 898 aaKnown RBP15.87■□□□□ 0.13
PTPN21-202ENST00000536337 KDM5DQ9BY66 1539 aa15.87■□□□□ 0.13
PTPN21-202ENST00000536337 TSHZ3Q63HK5 1081 aa15.87■□□□□ 0.13
PTPN21-202ENST00000536337 TRIM35Q9UPQ4 493 aa15.87■□□□□ 0.13
PTPN21-202ENST00000536337 UGGT1Q9NYU2 1555 aa15.86■□□□□ 0.13
PTPN21-202ENST00000536337 FAM43AQ8N2R8 423 aa15.86■□□□□ 0.13
PTPN21-202ENST00000536337 CHMP3Q9Y3E7 222 aa15.86■□□□□ 0.13
PTPN21-202ENST00000536337 MAP4K4O95819 1239 aaPredicted RBP15.86■□□□□ 0.13
PTPN21-202ENST00000536337 POLKQ9UBT6 870 aa15.86■□□□□ 0.13
PTPN21-202ENST00000536337 SSFA2P28290 1259 aa15.86■□□□□ 0.13
PTPN21-202ENST00000536337 EIF2AK4Q9P2K8 1649 aaKnown RBP15.85■□□□□ 0.13
PTPN21-202ENST00000536337 ANKRD36BQ8N2N9 1353 aa15.85■□□□□ 0.13
PTPN21-202ENST00000536337 GOLGA6L4A6NEF3 574 aa15.85■□□□□ 0.13
PTPN21-202ENST00000536337 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
PTPN21-202ENST00000536337 PTMSP20962 102 aa15.85■□□□□ 0.13
PTPN21-202ENST00000536337 NASPP49321 788 aaPredicted RBP15.85■□□□□ 0.13
PTPN21-202ENST00000536337 CCDC27Q2M243 656 aa15.85■□□□□ 0.13
PTPN21-202ENST00000536337 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
PTPN21-202ENST00000536337 AEBP1Q8IUX7 1158 aa15.85■□□□□ 0.13
PTPN21-202ENST00000536337 A0A1W2PP64 1363 aa15.84■□□□□ 0.13
PTPN21-202ENST00000536337 ZBTB40Q9NUA8 1239 aa15.84■□□□□ 0.13
PTPN21-202ENST00000536337 HDAC1Q13547 482 aaPredicted RBP15.84■□□□□ 0.13
PTPN21-202ENST00000536337 IL1RAPL2Q9NP60 686 aa15.84■□□□□ 0.13
PTPN21-202ENST00000536337 XRCC6P12956 609 aaKnown RBP eCLIP15.84■□□□□ 0.13
PTPN21-202ENST00000536337 CDC42BPAQ5VT25 1732 aa15.83■□□□□ 0.13
PTPN21-202ENST00000536337 ALDH1L2Q3SY69 923 aa15.83■□□□□ 0.13
PTPN21-202ENST00000536337 NUCB1Q02818 461 aa15.83■□□□□ 0.12
PTPN21-202ENST00000536337 PTPRTO14522 1441 aa15.83■□□□□ 0.12
PTPN21-202ENST00000536337 ATP10AO60312 1499 aa15.83■□□□□ 0.12
PTPN21-202ENST00000536337 SURF6O75683 361 aaKnown RBP15.82■□□□□ 0.12
PTPN21-202ENST00000536337 NUCB2P80303 420 aa15.82■□□□□ 0.12
PTPN21-202ENST00000536337 NPC1L1Q9UHC9 1359 aa15.82■□□□□ 0.12
PTPN21-202ENST00000536337 MAST1Q9Y2H9 1570 aa15.82■□□□□ 0.12
PTPN21-202ENST00000536337 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
PTPN21-202ENST00000536337 TTC37Q6PGP7 1564 aa15.82■□□□□ 0.12
PTPN21-202ENST00000536337 ZNF330Q9Y3S2 320 aaPredicted RBP15.82■□□□□ 0.12
PTPN21-202ENST00000536337 ABCC2Q92887 1545 aa15.81■□□□□ 0.12
PTPN21-202ENST00000536337 VAMP4O75379 141 aa15.81■□□□□ 0.12
PTPN21-202ENST00000536337 TEFQ10587 303 aa15.81■□□□□ 0.12
PTPN21-202ENST00000536337 RBM33Q96EV2 1170 aaKnown RBP15.81■□□□□ 0.12
PTPN21-202ENST00000536337 ARHGEF5Q12774 1597 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms