RNA–Protein interactions for RNA: ENST00000536226.1

CRNKL1-207, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRNKL1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-207ENST00000536226 CREBRFQ8IUR6 639 aa9.85□□□□□ -0.83
CRNKL1-207ENST00000536226 DDX49Q9Y6V7 483 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-207ENST00000536226 RPRD2Q5VT52 1461 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-207ENST00000536226 ANKRD30BQ9BXX2 1392 aa9.85□□□□□ -0.83
CRNKL1-207ENST00000536226 SETSIPP0DME0 302 aa9.85□□□□□ -0.83
CRNKL1-207ENST00000536226 PUS7Q96PZ0 661 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-207ENST00000536226 PPRC1Q5VV67 1664 aaKnown RBP9.84□□□□□ -0.83
CRNKL1-207ENST00000536226 CT47A1Q5JQC4 288 aaPredicted RBP9.84□□□□□ -0.83
CRNKL1-207ENST00000536226 KIF1CO43896 1103 aaKnown RBP9.84□□□□□ -0.83
CRNKL1-207ENST00000536226 KIDINS220Q9ULH0 1771 aa9.83□□□□□ -0.84
CRNKL1-207ENST00000536226 SRPK2P78362 688 aaKnown RBP9.83□□□□□ -0.84
CRNKL1-207ENST00000536226 PLCB2Q00722 1185 aa9.83□□□□□ -0.84
CRNKL1-207ENST00000536226 CCP110O43303 1012 aa9.83□□□□□ -0.84
CRNKL1-207ENST00000536226 NRDCO43847 1150 aa9.83□□□□□ -0.84
CRNKL1-207ENST00000536226 RDXP35241 583 aaKnown RBP9.83□□□□□ -0.84
CRNKL1-207ENST00000536226 CWC22Q9HCG8 908 aaKnown RBP9.83□□□□□ -0.84
CRNKL1-207ENST00000536226 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 EXOC6Q8TAG9 804 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 E9PCH4 1651 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 MAP3K4Q9Y6R4 1608 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 MPNDQ8N594 471 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 C9orf84Q5VXU9 1444 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 ZRSR1Q15695 479 aaKnown RBP9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 NBPF9Q3BBW0 867 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 KRT222Q8N1A0 295 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 ANKRD20A12PQ8NF67 263 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 RCAN3Q9UKA8 241 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 CCDC141Q6ZP82 1450 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 KIAA1107Q9UPP5 1409 aa9.82□□□□□ -0.84
CRNKL1-207ENST00000536226 HSPA5P11021 654 aaKnown RBP9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 ATP6V1AP38606 617 aa9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 FBLN2P98095 1184 aa9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 NBPF11Q86T75 865 aa9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 TPM3P06753 285 aa9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 ICE2Q659A1 982 aa9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 TMX1Q9H3N1 280 aa9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 PLCH2O75038 1416 aa9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 PLA2R1Q13018 1463 aa9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 CENPQQ7L2Z9 268 aaPredicted RBP9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 RPAINQ86UA6 219 aa9.81□□□□□ -0.84
CRNKL1-207ENST00000536226 EGFL6Q8IUX8 553 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 AK7Q96M32 723 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 CARD10Q9BWT7 1032 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 FRMPD1Q5SYB0 1578 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 IFT172Q9UG01 1749 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 A0A1B0GUL7 405 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 KDM5CP41229 1560 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 TTC31Q49AM3 519 aaPredicted RBP9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 ZNF513Q8N8E2 541 aaPredicted RBP9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 DRC1Q96MC2 740 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 TMCO5BA8MYB1 307 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 TPM4P67936 248 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 CCDC97Q96F63 343 aaPredicted RBP9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 SPATA31E1Q6ZUB1 1445 aa9.8□□□□□ -0.84
CRNKL1-207ENST00000536226 NEFHP12036 1026 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 RAI14Q9P0K7 980 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 WDR7Q9Y4E6 1490 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 SIGLEC1Q9BZZ2 1709 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 GTF2F1P35269 517 aaKnown RBP eCLIP9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 RRP1P56182 461 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 LEKR1Q6ZMV7 388 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 MYRIPQ8NFW9 859 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 CPSF2Q9P2I0 782 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 EIF2AK4Q9P2K8 1649 aaKnown RBP9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 FAM135AQ9P2D6 1515 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 BIRC2Q13490 618 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 C10orf67Q8IYJ2 551 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 PIK3R5Q8WYR1 880 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 SYAP1Q96A49 352 aaPredicted RBP9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 RICTORQ6R327 1708 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 PLEKHD1A6NEE1 506 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 ARMCX6Q7L4S7 300 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 TXLNBQ8N3L3 684 aa9.79□□□□□ -0.84
CRNKL1-207ENST00000536226 PPP1R15AO75807 674 aaPredicted RBP9.78□□□□□ -0.84
CRNKL1-207ENST00000536226 NUCKS1Q9H1E3 243 aaKnown RBP9.78□□□□□ -0.84
CRNKL1-207ENST00000536226 TRPM1Q7Z4N2 1603 aa9.78□□□□□ -0.84
CRNKL1-207ENST00000536226 RNF17Q9BXT8 1623 aaKnown RBP9.78□□□□□ -0.84
CRNKL1-207ENST00000536226 CEP152O94986 1710 aa9.78□□□□□ -0.84
CRNKL1-207ENST00000536226 MAP2K2P36507 400 aa9.78□□□□□ -0.84
CRNKL1-207ENST00000536226 ZKSCAN5Q9Y2L8 839 aa9.78□□□□□ -0.84
CRNKL1-207ENST00000536226 PPP2R5AQ15172 486 aa9.77□□□□□ -0.85
CRNKL1-207ENST00000536226 CALR3Q96L12 384 aaKnown RBP9.77□□□□□ -0.85
CRNKL1-207ENST00000536226 SEMA3FQ13275 785 aa9.77□□□□□ -0.85
CRNKL1-207ENST00000536226 NOL10Q9BSC4 688 aaKnown RBP9.77□□□□□ -0.85
CRNKL1-207ENST00000536226 ARHGAP5Q13017 1502 aa9.77□□□□□ -0.85
CRNKL1-207ENST00000536226 FSD2A1L4K1 749 aa9.77□□□□□ -0.85
CRNKL1-207ENST00000536226 RIMBP3CA6NJZ7 1639 aa9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 RIMBP3BA6NNM3 1639 aa9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 RIMBP3Q9UFD9 1639 aa9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 RRP7BPQ9NSQ0 103 aa9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 ATP10AO60312 1499 aa9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 TRAPPC8Q9Y2L5 1435 aa9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 PRDM15P57071 1507 aaPredicted RBP9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 ARGLU1Q9NWB6 273 aaPredicted RBP9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 NOL7Q9UMY1 257 aaKnown RBP9.76□□□□□ -0.85
CRNKL1-207ENST00000536226 TPM1P09493 284 aa9.75□□□□□ -0.85
CRNKL1-207ENST00000536226 PSEN1P49768 467 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms