RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 NSD2O96028 1365 aa22.22■■□□□ 1.15
VAMP1-205ENST00000535927 CARD14Q9BXL6 1004 aa22.21■■□□□ 1.15
VAMP1-205ENST00000535927 SBNO1A3KN83 1393 aa22.21■■□□□ 1.15
VAMP1-205ENST00000535927 SSH2Q76I76 1423 aa22.21■■□□□ 1.15
VAMP1-205ENST00000535927 KRT28Q7Z3Y7 464 aa22.2■■□□□ 1.14
VAMP1-205ENST00000535927 SOS2Q07890 1332 aaPredicted RBP22.19■■□□□ 1.14
VAMP1-205ENST00000535927 TTC21BQ7Z4L5 1316 aa22.18■■□□□ 1.14
VAMP1-205ENST00000535927 RGS17Q9UGC6 210 aaPredicted RBP22.18■■□□□ 1.14
VAMP1-205ENST00000535927 ROBO1Q9Y6N7 1651 aa22.17■■□□□ 1.14
VAMP1-205ENST00000535927 NHSL1Q5SYE7 1610 aa22.17■■□□□ 1.14
VAMP1-205ENST00000535927 AHDC1Q5TGY3 1603 aaPredicted RBP22.17■■□□□ 1.14
VAMP1-205ENST00000535927 NSD3Q9BZ95 1437 aa22.16■■□□□ 1.14
VAMP1-205ENST00000535927 AMER1Q5JTC6 1135 aaPredicted RBP22.15■■□□□ 1.14
VAMP1-205ENST00000535927 LRRC59Q96AG4 307 aaKnown RBP22.14■■□□□ 1.13
VAMP1-205ENST00000535927 NRKQ7Z2Y5 1582 aa22.13■■□□□ 1.13
VAMP1-205ENST00000535927 PXDNQ92626 1479 aa22.13■■□□□ 1.13
VAMP1-205ENST00000535927 ARHGEF10O15013 1369 aa22.12■■□□□ 1.13
VAMP1-205ENST00000535927 USP31Q70CQ4 1352 aa22.12■■□□□ 1.13
VAMP1-205ENST00000535927 FYB1O15117 783 aa22.12■■□□□ 1.13
VAMP1-205ENST00000535927 DIEXFQ68CQ4 756 aaKnown RBP22.12■■□□□ 1.13
VAMP1-205ENST00000535927 RALBP1Q15311 655 aa22.11■■□□□ 1.13
VAMP1-205ENST00000535927 NLRP13Q86W25 1043 aa22.11■■□□□ 1.13
VAMP1-205ENST00000535927 TRPM3Q9HCF6 1732 aaPredicted RBP22.11■■□□□ 1.13
VAMP1-205ENST00000535927 SPATA31A3Q5VYP0 1347 aa22.1■■□□□ 1.13
VAMP1-205ENST00000535927 PAK3O75914 559 aaPredicted RBP22.1■■□□□ 1.13
VAMP1-205ENST00000535927 ABTB2Q8N961 1025 aa22.1■■□□□ 1.13
VAMP1-205ENST00000535927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.09■■□□□ 1.13
VAMP1-205ENST00000535927 COG3Q96JB2 828 aa22.09■■□□□ 1.13
VAMP1-205ENST00000535927 KIF20BQ96Q89 1820 aa22.08■■□□□ 1.13
VAMP1-205ENST00000535927 TNS3Q68CZ2 1445 aa22.08■■□□□ 1.13
VAMP1-205ENST00000535927 ANP32CO43423 234 aa22.08■■□□□ 1.13
VAMP1-205ENST00000535927 USP54Q70EL1 1684 aa22.07■■□□□ 1.12
VAMP1-205ENST00000535927 POTEAQ6S8J7 498 aa22.07■■□□□ 1.12
VAMP1-205ENST00000535927 ALS2Q96Q42 1657 aa22.06■■□□□ 1.12
VAMP1-205ENST00000535927 ANKRD26Q9UPS8 1709 aa22.06■■□□□ 1.12
VAMP1-205ENST00000535927 NLRP6P59044 892 aa22.05■■□□□ 1.12
VAMP1-205ENST00000535927 MORC1Q86VD1 984 aa22.05■■□□□ 1.12
VAMP1-205ENST00000535927 KCNH5Q8NCM2 988 aa22.05■■□□□ 1.12
VAMP1-205ENST00000535927 PHLPP1O60346 1717 aa22.05■■□□□ 1.12
VAMP1-205ENST00000535927 XPCQ01831 940 aaPredicted RBP22.03■■□□□ 1.12
VAMP1-205ENST00000535927 NME9Q86XW9 330 aa22.03■■□□□ 1.12
VAMP1-205ENST00000535927 PRKRIP1Q9H875 184 aaPredicted RBP22.03■■□□□ 1.12
VAMP1-205ENST00000535927 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.12
VAMP1-205ENST00000535927 DDX17Q92841 729 aaKnown RBP22.02■■□□□ 1.12
VAMP1-205ENST00000535927 GGNBP2Q9H3C7 697 aa22.02■■□□□ 1.12
VAMP1-205ENST00000535927 OVOS2A0A0J9YW53 1432 aa22.02■■□□□ 1.12
VAMP1-205ENST00000535927 OVOS2Q6IE36 1432 aa22.02■■□□□ 1.12
VAMP1-205ENST00000535927 PIK3C2AO00443 1686 aa22.01■■□□□ 1.11
VAMP1-205ENST00000535927 AATKQ6ZMQ8 1374 aa22.01■■□□□ 1.11
VAMP1-205ENST00000535927 CC2D1BQ5T0F9 858 aaKnown RBP22.01■■□□□ 1.11
VAMP1-205ENST00000535927 USP19O94966 1318 aa22.01■■□□□ 1.11
VAMP1-205ENST00000535927 COL16A1Q07092 1604 aaPredicted RBP22■■□□□ 1.11
VAMP1-205ENST00000535927 LMOD2Q6P5Q4 547 aa21.99■■□□□ 1.11
VAMP1-205ENST00000535927 KIF24Q5T7B8 1368 aa21.97■■□□□ 1.11
VAMP1-205ENST00000535927 JCADQ9P266 1359 aa21.97■■□□□ 1.11
VAMP1-205ENST00000535927 COL22A1Q8NFW1 1626 aaPredicted RBP21.96■■□□□ 1.11
VAMP1-205ENST00000535927 MYBBP1AQ9BQG0 1328 aaKnown RBP21.96■■□□□ 1.11
VAMP1-205ENST00000535927 GCP02774 474 aa21.95■■□□□ 1.1
VAMP1-205ENST00000535927 SLIT3O75094 1523 aa21.95■■□□□ 1.1
VAMP1-205ENST00000535927 PNPLA6Q8IY17 1366 aa21.93■■□□□ 1.1
VAMP1-205ENST00000535927 SHPRHQ149N8 1683 aa21.92■■□□□ 1.1
VAMP1-205ENST00000535927 SPATA31A6Q5VVP1 1343 aa21.92■■□□□ 1.1
VAMP1-205ENST00000535927 ZRANB1Q9UGI0 708 aa21.92■■□□□ 1.1
VAMP1-205ENST00000535927 MARF1Q9Y4F3 1742 aaKnown RBP21.92■■□□□ 1.1
VAMP1-205ENST00000535927 NUTM2GQ5VZR2 741 aa21.91■■□□□ 1.1
VAMP1-205ENST00000535927 MAP2P11137 1827 aaKnown RBP21.91■■□□□ 1.1
VAMP1-205ENST00000535927 CCER2I3L3R5 266 aa21.9■■□□□ 1.1
VAMP1-205ENST00000535927 PPP2R1AP30153 589 aa21.9■■□□□ 1.1
VAMP1-205ENST00000535927 CPDO75976 1380 aa21.89■■□□□ 1.1
VAMP1-205ENST00000535927 HAP1P54257 671 aaPredicted RBP21.88■■□□□ 1.09
VAMP1-205ENST00000535927 ABCC6O95255 1503 aa21.88■■□□□ 1.09
VAMP1-205ENST00000535927 CRYBG1Q9Y4K1 1723 aa21.88■■□□□ 1.09
VAMP1-205ENST00000535927 INSRP06213 1382 aa21.87■■□□□ 1.09
VAMP1-205ENST00000535927 ARHGEF25Q86VW2 580 aa21.87■■□□□ 1.09
VAMP1-205ENST00000535927 CFAP53Q96M91 514 aa21.87■■□□□ 1.09
VAMP1-205ENST00000535927 POLKQ9UBT6 870 aa21.87■■□□□ 1.09
VAMP1-205ENST00000535927 RTL1A6NKG5 1358 aa21.87■■□□□ 1.09
VAMP1-205ENST00000535927 NFAT5O94916 1531 aa21.86■■□□□ 1.09
VAMP1-205ENST00000535927 MEX3CQ5U5Q3 659 aaKnown RBP21.86■■□□□ 1.09
VAMP1-205ENST00000535927 PHRF1Q9P1Y6 1649 aaKnown RBP21.86■■□□□ 1.09
VAMP1-205ENST00000535927 SMG6Q86US8 1419 aaKnown RBP21.86■■□□□ 1.09
VAMP1-205ENST00000535927 TNNT2P45379 298 aaPredicted RBP21.84■■□□□ 1.09
VAMP1-205ENST00000535927 MTHFSP49914 203 aa21.84■■□□□ 1.09
VAMP1-205ENST00000535927 IP6K1Q92551 441 aa21.83■■□□□ 1.09
VAMP1-205ENST00000535927 FLT4P35916 1363 aa21.83■■□□□ 1.08
VAMP1-205ENST00000535927 MAP3K19Q56UN5 1328 aa21.82■■□□□ 1.08
VAMP1-205ENST00000535927 AMPHP49418 695 aa21.82■■□□□ 1.08
VAMP1-205ENST00000535927 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
VAMP1-205ENST00000535927 ZNF772Q68DY9 489 aaPredicted RBP21.82■■□□□ 1.08
VAMP1-205ENST00000535927 ABCA3Q99758 1704 aa21.82■■□□□ 1.08
VAMP1-205ENST00000535927 CABLES1Q8TDN4 633 aa21.81■■□□□ 1.08
VAMP1-205ENST00000535927 CDK12Q9NYV4 1490 aaPredicted RBP21.81■■□□□ 1.08
VAMP1-205ENST00000535927 BLMP54132 1417 aaPredicted RBP21.8■■□□□ 1.08
VAMP1-205ENST00000535927 LTN1O94822 1766 aa21.79■■□□□ 1.08
VAMP1-205ENST00000535927 RRS1Q15050 365 aaKnown RBP21.79■■□□□ 1.08
VAMP1-205ENST00000535927 MIER1Q8N108 512 aa21.79■■□□□ 1.08
VAMP1-205ENST00000535927 ZC3H6P61129 1189 aaKnown RBP21.78■■□□□ 1.08
VAMP1-205ENST00000535927 PRDM11Q9NQV5 511 aa21.78■■□□□ 1.08
VAMP1-205ENST00000535927 NUDCQ9Y266 331 aa21.78■■□□□ 1.08
VAMP1-205ENST00000535927 KIAA0232Q92628 1395 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms