RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
UBB-204ENST00000535788 FOXO3O43524 673 aa13.24□□□□□ -0.29
UBB-204ENST00000535788 NEUROD1Q13562 356 aa13.23□□□□□ -0.29
UBB-204ENST00000535788 L3MBTL2Q969R5 705 aa13.23□□□□□ -0.29
UBB-204ENST00000535788 BCL11AQ9H165 835 aa13.23□□□□□ -0.29
UBB-204ENST00000535788 KIF1AQ12756 1690 aa13.23□□□□□ -0.29
UBB-204ENST00000535788 GLI3P10071 1580 aa13.23□□□□□ -0.29
UBB-204ENST00000535788 NPHP3Q7Z494 1330 aa13.22□□□□□ -0.29
UBB-204ENST00000535788 PDIA4P13667 645 aaKnown RBP13.22□□□□□ -0.29
UBB-204ENST00000535788 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
UBB-204ENST00000535788 PXDNQ92626 1479 aa13.22□□□□□ -0.29
UBB-204ENST00000535788 MINK1Q8N4C8 1332 aaPredicted RBP13.21□□□□□ -0.29
UBB-204ENST00000535788 HIRIP3Q9BW71 556 aaPredicted RBP13.21□□□□□ -0.29
UBB-204ENST00000535788 USP32Q8NFA0 1604 aa13.21□□□□□ -0.3
UBB-204ENST00000535788 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.3
UBB-204ENST00000535788 ANKARQ7Z5J8 1434 aa13.2□□□□□ -0.3
UBB-204ENST00000535788 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
UBB-204ENST00000535788 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
UBB-204ENST00000535788 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
UBB-204ENST00000535788 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
UBB-204ENST00000535788 TRPM1Q7Z4N2 1603 aa13.18□□□□□ -0.3
UBB-204ENST00000535788 VPS72Q15906 364 aa13.18□□□□□ -0.3
UBB-204ENST00000535788 SLIT2O94813 1529 aa13.18□□□□□ -0.3
UBB-204ENST00000535788 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
UBB-204ENST00000535788 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
UBB-204ENST00000535788 ADRA2BP18089 450 aa13.17□□□□□ -0.3
UBB-204ENST00000535788 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
UBB-204ENST00000535788 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
UBB-204ENST00000535788 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
UBB-204ENST00000535788 ONECUT3O60422 494 aaPredicted RBP13.16□□□□□ -0.3
UBB-204ENST00000535788 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
UBB-204ENST00000535788 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
UBB-204ENST00000535788 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
UBB-204ENST00000535788 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.16□□□□□ -0.3
UBB-204ENST00000535788 FAM98CQ17RN3 349 aaKnown RBP13.15□□□□□ -0.3
UBB-204ENST00000535788 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
UBB-204ENST00000535788 NBR1Q14596 966 aa13.14□□□□□ -0.31
UBB-204ENST00000535788 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
UBB-204ENST00000535788 PMFBP1Q8TBY8 1022 aa13.14□□□□□ -0.31
UBB-204ENST00000535788 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
UBB-204ENST00000535788 TONSLQ96HA7 1378 aa13.14□□□□□ -0.31
UBB-204ENST00000535788 ATP7BP35670 1465 aa13.14□□□□□ -0.31
UBB-204ENST00000535788 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
UBB-204ENST00000535788 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
UBB-204ENST00000535788 ROCK2O75116 1388 aaKnown RBP13.13□□□□□ -0.31
UBB-204ENST00000535788 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
UBB-204ENST00000535788 SPATA31A3Q5VYP0 1347 aa13.13□□□□□ -0.31
UBB-204ENST00000535788 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
UBB-204ENST00000535788 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
UBB-204ENST00000535788 PSME1Q06323 249 aa13.11□□□□□ -0.31
UBB-204ENST00000535788 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
UBB-204ENST00000535788 CDK19Q9BWU1 502 aa13.11□□□□□ -0.31
UBB-204ENST00000535788 TOPAZ1Q8N9V7 1692 aa13.11□□□□□ -0.31
UBB-204ENST00000535788 SBNO1A3KN83 1393 aa13.1□□□□□ -0.31
UBB-204ENST00000535788 NUDT16Q96DE0 195 aaKnown RBP13.1□□□□□ -0.31
UBB-204ENST00000535788 TRPM3Q9HCF6 1732 aaPredicted RBP13.1□□□□□ -0.31
UBB-204ENST00000535788 GPRASP1Q5JY77 1395 aa13.09□□□□□ -0.31
UBB-204ENST00000535788 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
UBB-204ENST00000535788 HSP90B1P14625 803 aaKnown RBP13.09□□□□□ -0.31
UBB-204ENST00000535788 UBE2Q2Q8WVN8 375 aa13.09□□□□□ -0.31
UBB-204ENST00000535788 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
UBB-204ENST00000535788 TRIM37O94972 964 aa13.08□□□□□ -0.32
UBB-204ENST00000535788 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
UBB-204ENST00000535788 PCGF6Q9BYE7 350 aa13.08□□□□□ -0.32
UBB-204ENST00000535788 ABCA3Q99758 1704 aa13.08□□□□□ -0.32
UBB-204ENST00000535788 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
UBB-204ENST00000535788 APBA3O96018 575 aa13.07□□□□□ -0.32
UBB-204ENST00000535788 SRPK2P78362 688 aaKnown RBP13.07□□□□□ -0.32
UBB-204ENST00000535788 CAMKK2Q96RR4 588 aa13.07□□□□□ -0.32
UBB-204ENST00000535788 ALS2Q96Q42 1657 aa13.07□□□□□ -0.32
UBB-204ENST00000535788 ZNF784Q8NCA9 323 aaPredicted RBP13.06□□□□□ -0.32
UBB-204ENST00000535788 BTG4Q9NY30 223 aa13.06□□□□□ -0.32
UBB-204ENST00000535788 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
UBB-204ENST00000535788 CHMP4AQ9BY43 222 aa13.05□□□□□ -0.32
UBB-204ENST00000535788 SPON1Q9HCB6 807 aa13.05□□□□□ -0.32
UBB-204ENST00000535788 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
UBB-204ENST00000535788 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
UBB-204ENST00000535788 NBPF14Q5TI25 921 aa13.04□□□□□ -0.32
UBB-204ENST00000535788 CARD11Q9BXL7 1154 aa13.04□□□□□ -0.32
UBB-204ENST00000535788 PLCH1Q4KWH8 1693 aa13.04□□□□□ -0.32
UBB-204ENST00000535788 POLR3AO14802 1390 aaPredicted RBP13.04□□□□□ -0.32
UBB-204ENST00000535788 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
UBB-204ENST00000535788 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
UBB-204ENST00000535788 ACEP12821 1306 aa13.03□□□□□ -0.32
UBB-204ENST00000535788 EVC2Q86UK5 1308 aa13.03□□□□□ -0.32
UBB-204ENST00000535788 PLEKHG3A1L390 1219 aa13.02□□□□□ -0.33
UBB-204ENST00000535788 KCNQ2O43526 872 aa13.02□□□□□ -0.33
UBB-204ENST00000535788 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
UBB-204ENST00000535788 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.33
UBB-204ENST00000535788 CRYBG1Q9Y4K1 1723 aa13.02□□□□□ -0.33
UBB-204ENST00000535788 UTRNP46939 3433 aa13.01□□□□□ -0.33
UBB-204ENST00000535788 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
UBB-204ENST00000535788 DISP2A7MBM2 1401 aa13.01□□□□□ -0.33
UBB-204ENST00000535788 SBNO2Q9Y2G9 1366 aa13□□□□□ -0.33
UBB-204ENST00000535788 FAM196AQ6ZSG2 479 aa13□□□□□ -0.33
UBB-204ENST00000535788 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
UBB-204ENST00000535788 SPATA31A5Q5VU36 1347 aa12.99□□□□□ -0.33
UBB-204ENST00000535788 SPATA31A7Q8IWB4 1347 aa12.99□□□□□ -0.33
UBB-204ENST00000535788 CLSPNQ9HAW4 1339 aa12.99□□□□□ -0.33
UBB-204ENST00000535788 BRD2P25440 801 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms