RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 NUDT12Q9BQG2 462 aa6.73□□□□□ -1.33
GYPA-211ENST00000535709 TOR4AQ9NXH8 423 aa6.73□□□□□ -1.33
GYPA-211ENST00000535709 SCRIBQ14160 1630 aa6.72□□□□□ -1.33
GYPA-211ENST00000535709 MFAP1P55081 439 aaKnown RBP6.72□□□□□ -1.33
GYPA-211ENST00000535709 WNT7BP56706 349 aa6.72□□□□□ -1.33
GYPA-211ENST00000535709 PTPRNQ16849 979 aa6.72□□□□□ -1.33
GYPA-211ENST00000535709 RSBN1LQ6PCB5 846 aaPredicted RBP6.72□□□□□ -1.33
GYPA-211ENST00000535709 CYP4X1Q8N118 509 aa6.72□□□□□ -1.33
GYPA-211ENST00000535709 CRIPAKQ8N1N5 446 aa6.72□□□□□ -1.33
GYPA-211ENST00000535709 CCDC82Q8N4S0 544 aa6.72□□□□□ -1.33
GYPA-211ENST00000535709 SYMPKQ92797 1274 aaKnown RBP6.72□□□□□ -1.33
GYPA-211ENST00000535709 TBC1D2Q9BYX2 928 aa6.72□□□□□ -1.33
GYPA-211ENST00000535709 E9PSI1 815 aa6.71□□□□□ -1.34
GYPA-211ENST00000535709 SPTLC1O15269 473 aa6.71□□□□□ -1.34
GYPA-211ENST00000535709 AVPP01185 164 aa6.71□□□□□ -1.34
GYPA-211ENST00000535709 NDUFV2P19404 249 aa6.71□□□□□ -1.34
GYPA-211ENST00000535709 FLIIQ13045 1269 aa6.71□□□□□ -1.34
GYPA-211ENST00000535709 CCDC24Q8N4L8 307 aa6.71□□□□□ -1.34
GYPA-211ENST00000535709 IL27Q8NEV9 243 aa6.71□□□□□ -1.34
GYPA-211ENST00000535709 CCNYL3P0C7X3 344 aa6.7□□□□□ -1.34
GYPA-211ENST00000535709 CTC1Q2NKJ3 1217 aa6.7□□□□□ -1.34
GYPA-211ENST00000535709 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
GYPA-211ENST00000535709 PRPF38BQ5VTL8 546 aaKnown RBP6.7□□□□□ -1.34
GYPA-211ENST00000535709 FAM117AQ9C073 453 aa6.7□□□□□ -1.34
GYPA-211ENST00000535709 BICRAQ9NZM4 1560 aa6.69□□□□□ -1.34
GYPA-211ENST00000535709 PRR7Q8TB68 274 aa6.69□□□□□ -1.34
GYPA-211ENST00000535709 ZBTB3Q9H5J0 574 aa6.69□□□□□ -1.34
GYPA-211ENST00000535709 PLEKHG3A1L390 1219 aa6.68□□□□□ -1.34
GYPA-211ENST00000535709 SNIP1Q8TAD8 396 aaKnown RBP6.68□□□□□ -1.34
GYPA-211ENST00000535709 TTC24A2A3L6 582 aaPredicted RBP6.67□□□□□ -1.34
GYPA-211ENST00000535709 SMCPP49901 116 aaPredicted RBP6.67□□□□□ -1.34
GYPA-211ENST00000535709 AEBP1Q8IUX7 1158 aa6.67□□□□□ -1.34
GYPA-211ENST00000535709 MRGPRX2Q96LB1 330 aa6.67□□□□□ -1.34
GYPA-211ENST00000535709 EVA1BQ9NVM1 165 aa6.67□□□□□ -1.34
GYPA-211ENST00000535709 A6NJR5 290 aa6.66□□□□□ -1.34
GYPA-211ENST00000535709 SKOR1P84550 965 aa6.66□□□□□ -1.34
GYPA-211ENST00000535709 RC3H1Q5TC82 1133 aaKnown RBP6.66□□□□□ -1.34
GYPA-211ENST00000535709 FOXD4L5Q5VV16 416 aaPredicted RBP6.66□□□□□ -1.34
GYPA-211ENST00000535709 ZNF787Q6DD87 383 aa6.66□□□□□ -1.34
GYPA-211ENST00000535709 RIC3Q7Z5B4 369 aa6.66□□□□□ -1.34
GYPA-211ENST00000535709 FOXD4L4Q8WXT5 416 aaPredicted RBP6.66□□□□□ -1.34
GYPA-211ENST00000535709 AAASQ9NRG9 546 aa6.66□□□□□ -1.34
GYPA-211ENST00000535709 KCNH2Q12809 1159 aa6.65□□□□□ -1.34
GYPA-211ENST00000535709 MYSM1Q5VVJ2 828 aa6.65□□□□□ -1.34
GYPA-211ENST00000535709 UNC93B1Q9H1C4 597 aa6.65□□□□□ -1.34
GYPA-211ENST00000535709 SMPD1P17405 629 aa6.64□□□□□ -1.35
GYPA-211ENST00000535709 PTCRAQ6ISU1 281 aaPredicted RBP6.64□□□□□ -1.35
GYPA-211ENST00000535709 LYPD8Q6UX82 237 aa6.64□□□□□ -1.35
GYPA-211ENST00000535709 ZNF428Q96B54 188 aa6.64□□□□□ -1.35
GYPA-211ENST00000535709 DDRGK1Q96HY6 314 aa6.64□□□□□ -1.35
GYPA-211ENST00000535709 AXIN1O15169 862 aa6.63□□□□□ -1.35
GYPA-211ENST00000535709 CLK2P49760 499 aaKnown RBP6.63□□□□□ -1.35
GYPA-211ENST00000535709 DHX37Q8IY37 1157 aaKnown RBP6.63□□□□□ -1.35
GYPA-211ENST00000535709 USP35Q9P2H5 1018 aa6.63□□□□□ -1.35
GYPA-211ENST00000535709 PCDHB15Q9Y5E8 787 aa6.63□□□□□ -1.35
GYPA-211ENST00000535709 CFAP99D6REC4 459 aa6.62□□□□□ -1.35
GYPA-211ENST00000535709 ST8SIA5O15466 376 aa6.62□□□□□ -1.35
GYPA-211ENST00000535709 TRAK2O60296 914 aa6.62□□□□□ -1.35
GYPA-211ENST00000535709 F12P00748 615 aaPredicted RBP6.62□□□□□ -1.35
GYPA-211ENST00000535709 EHBP1Q8NDI1 1231 aa6.62□□□□□ -1.35
GYPA-211ENST00000535709 GZF1Q9H116 711 aaPredicted RBP6.62□□□□□ -1.35
GYPA-211ENST00000535709 LIMD1Q9UGP4 676 aa6.62□□□□□ -1.35
GYPA-211ENST00000535709 LILRB3O75022 631 aa6.61□□□□□ -1.35
GYPA-211ENST00000535709 SH3BP2P78314 561 aa6.61□□□□□ -1.35
GYPA-211ENST00000535709 TAF7LQ5H9L4 462 aa6.61□□□□□ -1.35
GYPA-211ENST00000535709 FAM177A1Q8N128 213 aaPredicted RBP6.61□□□□□ -1.35
GYPA-211ENST00000535709 ZNF511Q8NB15 262 aa6.61□□□□□ -1.35
GYPA-211ENST00000535709 POLR3GLQ9BT43 218 aa6.61□□□□□ -1.35
GYPA-211ENST00000535709 AMOTL2Q9Y2J4 779 aa6.61□□□□□ -1.35
GYPA-211ENST00000535709 PATL2C9JE40 543 aaKnown RBP6.6□□□□□ -1.35
GYPA-211ENST00000535709 J3QL48 77 aa6.6□□□□□ -1.35
GYPA-211ENST00000535709 SIAH2O43255 324 aa6.6□□□□□ -1.35
GYPA-211ENST00000535709 MPNDQ8N594 471 aa6.6□□□□□ -1.35
GYPA-211ENST00000535709 HELBQ8NG08 1087 aaPredicted RBP6.6□□□□□ -1.35
GYPA-211ENST00000535709 CABLES1Q8TDN4 633 aa6.6□□□□□ -1.35
GYPA-211ENST00000535709 VARSP26640 1264 aaKnown RBP6.59□□□□□ -1.35
GYPA-211ENST00000535709 CANXP27824 592 aaKnown RBP6.59□□□□□ -1.35
GYPA-211ENST00000535709 CTHP32929 405 aa6.59□□□□□ -1.35
GYPA-211ENST00000535709 CSPP1Q1MSJ5 1256 aa6.59□□□□□ -1.35
GYPA-211ENST00000535709 SH3D19Q5HYK7 790 aa6.59□□□□□ -1.35
GYPA-211ENST00000535709 NUTM2BA6NNL0 878 aaPredicted RBP6.58□□□□□ -1.36
GYPA-211ENST00000535709 NUTM2EB1AL46 878 aaPredicted RBP6.58□□□□□ -1.36
GYPA-211ENST00000535709 ALDH1A1P00352 501 aa6.58□□□□□ -1.36
GYPA-211ENST00000535709 QPCTQ16769 361 aa6.58□□□□□ -1.36
GYPA-211ENST00000535709 LINC01559Q495D7 138 aa6.58□□□□□ -1.36
GYPA-211ENST00000535709 NUTM2DQ5VT03 806 aaPredicted RBP6.58□□□□□ -1.36
GYPA-211ENST00000535709 NUTM2AQ8IVF1 878 aaPredicted RBP6.58□□□□□ -1.36
GYPA-211ENST00000535709 BAP1Q92560 729 aa6.58□□□□□ -1.36
GYPA-211ENST00000535709 SERPINA10Q9UK55 444 aa6.58□□□□□ -1.36
GYPA-211ENST00000535709 CCDC125Q86Z20 511 aa6.57□□□□□ -1.36
GYPA-211ENST00000535709 ARMC2Q8NEN0 867 aa6.57□□□□□ -1.36
GYPA-211ENST00000535709 BCCIPQ9P287 314 aaKnown RBP eCLIP6.57□□□□□ -1.36
GYPA-211ENST00000535709 MAP10Q9P2G4 905 aa6.57□□□□□ -1.36
GYPA-211ENST00000535709 CECR2Q9BXF3 1484 aa6.56□□□□□ -1.36
GYPA-211ENST00000535709 SKIV2LQ15477 1246 aaKnown RBP6.56□□□□□ -1.36
GYPA-211ENST00000535709 HPS1Q92902 700 aa6.56□□□□□ -1.36
GYPA-211ENST00000535709 GOPCQ9HD26 462 aa6.56□□□□□ -1.36
GYPA-211ENST00000535709 WASF2Q9Y6W5 498 aa6.56□□□□□ -1.36
GYPA-211ENST00000535709 POTECB2RU33 542 aa6.55□□□□□ -1.36
GYPA-211ENST00000535709 PER1O15534 1290 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms