RNA–Protein interactions for RNA: ENST00000534516.2

NCAM1-218, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-218ENST00000534516 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
NCAM1-218ENST00000534516 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
NCAM1-218ENST00000534516 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
NCAM1-218ENST00000534516 C8orf37Q96NL8 207 aa12.52□□□□□ -0.41
NCAM1-218ENST00000534516 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
NCAM1-218ENST00000534516 ATP7BP35670 1465 aa12.52□□□□□ -0.41
NCAM1-218ENST00000534516 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
NCAM1-218ENST00000534516 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
NCAM1-218ENST00000534516 AFF2P51816 1311 aa12.51□□□□□ -0.41
NCAM1-218ENST00000534516 SPATA31A3Q5VYP0 1347 aa12.51□□□□□ -0.41
NCAM1-218ENST00000534516 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
NCAM1-218ENST00000534516 CABLES1Q8TDN4 633 aa12.5□□□□□ -0.41
NCAM1-218ENST00000534516 NUDT16Q96DE0 195 aaKnown RBP12.5□□□□□ -0.41
NCAM1-218ENST00000534516 TOPAZ1Q8N9V7 1692 aa12.5□□□□□ -0.41
NCAM1-218ENST00000534516 ITSN1Q15811 1721 aa12.49□□□□□ -0.41
NCAM1-218ENST00000534516 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
NCAM1-218ENST00000534516 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
NCAM1-218ENST00000534516 CENPJQ9HC77 1338 aaPredicted RBP12.49□□□□□ -0.41
NCAM1-218ENST00000534516 PSME1Q06323 249 aa12.49□□□□□ -0.41
NCAM1-218ENST00000534516 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
NCAM1-218ENST00000534516 TNS3Q68CZ2 1445 aa12.48□□□□□ -0.41
NCAM1-218ENST00000534516 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
NCAM1-218ENST00000534516 ALS2Q96Q42 1657 aa12.48□□□□□ -0.41
NCAM1-218ENST00000534516 EIF3AQ14152 1382 aaKnown RBP12.47□□□□□ -0.41
NCAM1-218ENST00000534516 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
NCAM1-218ENST00000534516 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
NCAM1-218ENST00000534516 SBNO1A3KN83 1393 aa12.46□□□□□ -0.41
NCAM1-218ENST00000534516 ZNF772Q68DY9 489 aaPredicted RBP12.46□□□□□ -0.41
NCAM1-218ENST00000534516 GPRASP1Q5JY77 1395 aa12.45□□□□□ -0.42
NCAM1-218ENST00000534516 NGDNQ8NEJ9 315 aaKnown RBP12.45□□□□□ -0.42
NCAM1-218ENST00000534516 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
NCAM1-218ENST00000534516 ACEP12821 1306 aa12.44□□□□□ -0.42
NCAM1-218ENST00000534516 SRPK2P78362 688 aaKnown RBP12.44□□□□□ -0.42
NCAM1-218ENST00000534516 CRYBG1Q9Y4K1 1723 aa12.44□□□□□ -0.42
NCAM1-218ENST00000534516 FNBP4Q8N3X1 1017 aaPredicted RBP12.43□□□□□ -0.42
NCAM1-218ENST00000534516 CARD11Q9BXL7 1154 aa12.43□□□□□ -0.42
NCAM1-218ENST00000534516 QTRT2Q9H974 415 aaKnown RBP12.43□□□□□ -0.42
NCAM1-218ENST00000534516 USP21Q9UK80 565 aa12.43□□□□□ -0.42
NCAM1-218ENST00000534516 CCDC61Q9Y6R9 512 aa12.43□□□□□ -0.42
NCAM1-218ENST00000534516 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
NCAM1-218ENST00000534516 POLR3AO14802 1390 aaPredicted RBP12.43□□□□□ -0.42
NCAM1-218ENST00000534516 BCL9LQ86UU0 1499 aa12.42□□□□□ -0.42
NCAM1-218ENST00000534516 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
NCAM1-218ENST00000534516 RXRBP28702 533 aa12.42□□□□□ -0.42
NCAM1-218ENST00000534516 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
NCAM1-218ENST00000534516 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
NCAM1-218ENST00000534516 NUTM2GQ5VZR2 741 aa12.41□□□□□ -0.42
NCAM1-218ENST00000534516 CABP1Q9NZU7 370 aa12.41□□□□□ -0.42
NCAM1-218ENST00000534516 ARHGEF10O15013 1369 aa12.41□□□□□ -0.42
NCAM1-218ENST00000534516 RGS12O14924 1447 aa12.4□□□□□ -0.42
NCAM1-218ENST00000534516 ATRNO75882 1429 aa12.4□□□□□ -0.42
NCAM1-218ENST00000534516 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
NCAM1-218ENST00000534516 SLIT2O94813 1529 aa12.39□□□□□ -0.43
NCAM1-218ENST00000534516 FAM83GA6ND36 823 aa12.39□□□□□ -0.43
NCAM1-218ENST00000534516 HAP1P54257 671 aaPredicted RBP12.39□□□□□ -0.43
NCAM1-218ENST00000534516 PHRF1Q9P1Y6 1649 aaKnown RBP12.39□□□□□ -0.43
NCAM1-218ENST00000534516 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.38□□□□□ -0.43
NCAM1-218ENST00000534516 RBM6P78332 1123 aaKnown RBP12.38□□□□□ -0.43
NCAM1-218ENST00000534516 AKAP12Q02952 1782 aa12.38□□□□□ -0.43
NCAM1-218ENST00000534516 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
NCAM1-218ENST00000534516 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
NCAM1-218ENST00000534516 GLI3P10071 1580 aa12.36□□□□□ -0.43
NCAM1-218ENST00000534516 UNC5CLQ8IV45 518 aa12.36□□□□□ -0.43
NCAM1-218ENST00000534516 NWD2Q9ULI1 1742 aa12.36□□□□□ -0.43
NCAM1-218ENST00000534516 CDK12Q9NYV4 1490 aaPredicted RBP12.35□□□□□ -0.43
NCAM1-218ENST00000534516 ST20-MTHFSA0A0A6YYL1 179 aa12.35□□□□□ -0.43
NCAM1-218ENST00000534516 PRKAR2AP13861 404 aaKnown RBP12.35□□□□□ -0.43
NCAM1-218ENST00000534516 ABTB2Q8N961 1025 aa12.35□□□□□ -0.43
NCAM1-218ENST00000534516 USP6P35125 1406 aa12.35□□□□□ -0.43
NCAM1-218ENST00000534516 PIK3C2AO00443 1686 aa12.35□□□□□ -0.43
NCAM1-218ENST00000534516 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
NCAM1-218ENST00000534516 SBNO2Q9Y2G9 1366 aa12.34□□□□□ -0.43
NCAM1-218ENST00000534516 COL14A1Q05707 1796 aaKnown RBP12.34□□□□□ -0.43
NCAM1-218ENST00000534516 SPDYE4A6NLX3 237 aa12.34□□□□□ -0.43
NCAM1-218ENST00000534516 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
NCAM1-218ENST00000534516 CCER1Q8TC90 406 aaPredicted RBP12.34□□□□□ -0.43
NCAM1-218ENST00000534516 GJD4Q96KN9 370 aaPredicted RBP12.34□□□□□ -0.43
NCAM1-218ENST00000534516 TESK2Q96S53 571 aa12.34□□□□□ -0.43
NCAM1-218ENST00000534516 SSH2Q76I76 1423 aa12.34□□□□□ -0.43
NCAM1-218ENST00000534516 KIAA0232Q92628 1395 aa12.33□□□□□ -0.44
NCAM1-218ENST00000534516 BRWD3Q6RI45 1802 aa12.33□□□□□ -0.44
NCAM1-218ENST00000534516 ZC3H6P61129 1189 aaKnown RBP12.33□□□□□ -0.44
NCAM1-218ENST00000534516 BTG4Q9NY30 223 aa12.33□□□□□ -0.44
NCAM1-218ENST00000534516 CD163L1Q9NR16 1453 aa12.33□□□□□ -0.44
NCAM1-218ENST00000534516 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
NCAM1-218ENST00000534516 HAX1O00165 279 aa12.32□□□□□ -0.44
NCAM1-218ENST00000534516 PRR29P0C7W0 189 aa12.32□□□□□ -0.44
NCAM1-218ENST00000534516 CLSPNQ9HAW4 1339 aa12.32□□□□□ -0.44
NCAM1-218ENST00000534516 USP47Q96K76 1375 aa12.31□□□□□ -0.44
NCAM1-218ENST00000534516 EP400Q96L91 3159 aa12.31□□□□□ -0.44
NCAM1-218ENST00000534516 CPSF1Q10570 1443 aaKnown RBP12.31□□□□□ -0.44
NCAM1-218ENST00000534516 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
NCAM1-218ENST00000534516 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
NCAM1-218ENST00000534516 USP19O94966 1318 aa12.31□□□□□ -0.44
NCAM1-218ENST00000534516 ATAD2Q6PL18 1390 aa12.3□□□□□ -0.44
NCAM1-218ENST00000534516 VPS72Q15906 364 aa12.3□□□□□ -0.44
NCAM1-218ENST00000534516 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
NCAM1-218ENST00000534516 PRDM11Q9NQV5 511 aa12.3□□□□□ -0.44
NCAM1-218ENST00000534516 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
NCAM1-218ENST00000534516 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms