RNA–Protein interactions for RNA: ENST00000534417.1

TTC17-215, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 2

Gene TTC17, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-215ENST00000534417 TOPAZ1Q8N9V7 1692 aa13.63□□□□□ -0.23
TTC17-215ENST00000534417 ITSN1Q15811 1721 aa13.62□□□□□ -0.23
TTC17-215ENST00000534417 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
TTC17-215ENST00000534417 CDK19Q9BWU1 502 aa13.62□□□□□ -0.23
TTC17-215ENST00000534417 STK26Q9P289 416 aa13.62□□□□□ -0.23
TTC17-215ENST00000534417 C3P01024 1663 aa13.62□□□□□ -0.23
TTC17-215ENST00000534417 BCAR3O75815 825 aa13.61□□□□□ -0.23
TTC17-215ENST00000534417 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
TTC17-215ENST00000534417 AATKQ6ZMQ8 1374 aa13.6□□□□□ -0.23
TTC17-215ENST00000534417 NRKQ7Z2Y5 1582 aa13.6□□□□□ -0.23
TTC17-215ENST00000534417 PNNQ9H307 717 aaKnown RBP13.6□□□□□ -0.23
TTC17-215ENST00000534417 STAG3Q9UJ98 1225 aa13.6□□□□□ -0.23
TTC17-215ENST00000534417 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
TTC17-215ENST00000534417 TNRQ92752 1358 aa13.59□□□□□ -0.23
TTC17-215ENST00000534417 PPIP5K1Q6PFW1 1433 aa13.59□□□□□ -0.23
TTC17-215ENST00000534417 TNNT2P45379 298 aaPredicted RBP13.59□□□□□ -0.23
TTC17-215ENST00000534417 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
TTC17-215ENST00000534417 HDGFP51858 240 aaKnown RBP13.58□□□□□ -0.24
TTC17-215ENST00000534417 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
TTC17-215ENST00000534417 SAFB2Q14151 953 aaKnown RBP eCLIP13.58□□□□□ -0.24
TTC17-215ENST00000534417 GGNBP2Q9H3C7 697 aa13.58□□□□□ -0.24
TTC17-215ENST00000534417 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.24
TTC17-215ENST00000534417 MAP2P11137 1827 aaKnown RBP13.57□□□□□ -0.24
TTC17-215ENST00000534417 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
TTC17-215ENST00000534417 CLUAP1Q96AJ1 413 aa13.57□□□□□ -0.24
TTC17-215ENST00000534417 METP08581 1390 aa13.57□□□□□ -0.24
TTC17-215ENST00000534417 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
TTC17-215ENST00000534417 WASLO00401 505 aaPredicted RBP13.56□□□□□ -0.24
TTC17-215ENST00000534417 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
TTC17-215ENST00000534417 RIMS1Q86UR5 1692 aaKnown RBP13.56□□□□□ -0.24
TTC17-215ENST00000534417 ADAMTS13Q76LX8 1427 aa13.56□□□□□ -0.24
TTC17-215ENST00000534417 SLIT1O75093 1534 aa13.55□□□□□ -0.24
TTC17-215ENST00000534417 DIAPH1O60610 1272 aaKnown RBP13.55□□□□□ -0.24
TTC17-215ENST00000534417 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
TTC17-215ENST00000534417 FCHSD2O94868 740 aa13.55□□□□□ -0.24
TTC17-215ENST00000534417 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
TTC17-215ENST00000534417 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
TTC17-215ENST00000534417 TRIM35Q9UPQ4 493 aa13.55□□□□□ -0.24
TTC17-215ENST00000534417 RRP7AQ9Y3A4 280 aaKnown RBP13.55□□□□□ -0.24
TTC17-215ENST00000534417 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
TTC17-215ENST00000534417 PLEKHG1Q9ULL1 1385 aa13.55□□□□□ -0.24
TTC17-215ENST00000534417 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
TTC17-215ENST00000534417 DIP2AQ14689 1571 aa13.54□□□□□ -0.24
TTC17-215ENST00000534417 DDRGK1Q96HY6 314 aa13.54□□□□□ -0.24
TTC17-215ENST00000534417 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.53□□□□□ -0.24
TTC17-215ENST00000534417 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
TTC17-215ENST00000534417 PMFBP1Q8TBY8 1022 aa13.53□□□□□ -0.24
TTC17-215ENST00000534417 ZNF428Q96B54 188 aa13.52□□□□□ -0.25
TTC17-215ENST00000534417 IGHDP01880 384 aa13.51□□□□□ -0.25
TTC17-215ENST00000534417 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
TTC17-215ENST00000534417 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
TTC17-215ENST00000534417 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
TTC17-215ENST00000534417 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
TTC17-215ENST00000534417 POLKQ9UBT6 870 aa13.51□□□□□ -0.25
TTC17-215ENST00000534417 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
TTC17-215ENST00000534417 NEUROD2Q15784 382 aa13.5□□□□□ -0.25
TTC17-215ENST00000534417 ZKSCAN2Q63HK3 967 aa13.5□□□□□ -0.25
TTC17-215ENST00000534417 ESF1Q9H501 851 aaKnown RBP13.5□□□□□ -0.25
TTC17-215ENST00000534417 COG6Q9Y2V7 657 aa13.5□□□□□ -0.25
TTC17-215ENST00000534417 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
TTC17-215ENST00000534417 PTCH1Q13635 1447 aa13.49□□□□□ -0.25
TTC17-215ENST00000534417 U2SURPO15042 1029 aaKnown RBP13.49□□□□□ -0.25
TTC17-215ENST00000534417 MVPQ14764 893 aaKnown RBP13.49□□□□□ -0.25
TTC17-215ENST00000534417 CCDC61Q9Y6R9 512 aa13.49□□□□□ -0.25
TTC17-215ENST00000534417 USP54Q70EL1 1684 aa13.49□□□□□ -0.25
TTC17-215ENST00000534417 OVOS2A0A0J9YW53 1432 aa13.48□□□□□ -0.25
TTC17-215ENST00000534417 OVOS2Q6IE36 1432 aa13.48□□□□□ -0.25
TTC17-215ENST00000534417 RLBP1P12271 317 aa13.48□□□□□ -0.25
TTC17-215ENST00000534417 ALDH1L2Q3SY69 923 aa13.48□□□□□ -0.25
TTC17-215ENST00000534417 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
TTC17-215ENST00000534417 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
TTC17-215ENST00000534417 DLG5Q8TDM6 1919 aa13.48□□□□□ -0.25
TTC17-215ENST00000534417 XRN1Q8IZH2 1706 aaKnown RBP13.47□□□□□ -0.25
TTC17-215ENST00000534417 ROBO2Q9HCK4 1378 aa13.47□□□□□ -0.25
TTC17-215ENST00000534417 KIF16BQ96L93 1317 aa13.47□□□□□ -0.25
TTC17-215ENST00000534417 CALD1Q05682 793 aaKnown RBP13.47□□□□□ -0.25
TTC17-215ENST00000534417 SKAP1Q86WV1 359 aa13.47□□□□□ -0.25
TTC17-215ENST00000534417 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
TTC17-215ENST00000534417 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
TTC17-215ENST00000534417 PIK3R4Q99570 1358 aa13.46□□□□□ -0.25
TTC17-215ENST00000534417 IL13P35225 146 aa13.46□□□□□ -0.25
TTC17-215ENST00000534417 RIPK4P57078 832 aa13.46□□□□□ -0.25
TTC17-215ENST00000534417 EXOSC9Q06265 439 aaKnown RBP13.46□□□□□ -0.25
TTC17-215ENST00000534417 MLECQ14165 292 aa13.46□□□□□ -0.25
TTC17-215ENST00000534417 NFE2L2Q16236 605 aa13.46□□□□□ -0.25
TTC17-215ENST00000534417 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.25
TTC17-215ENST00000534417 FRAT1Q92837 279 aaPredicted RBP13.46□□□□□ -0.25
TTC17-215ENST00000534417 PRR36Q9H6K5 1346 aa13.45□□□□□ -0.26
TTC17-215ENST00000534417 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
TTC17-215ENST00000534417 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
TTC17-215ENST00000534417 PCDHB15Q9Y5E8 787 aa13.45□□□□□ -0.26
TTC17-215ENST00000534417 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
TTC17-215ENST00000534417 HDAC1Q13547 482 aaPredicted RBP13.44□□□□□ -0.26
TTC17-215ENST00000534417 SSH1Q8WYL5 1049 aa13.44□□□□□ -0.26
TTC17-215ENST00000534417 USP35Q9P2H5 1018 aa13.44□□□□□ -0.26
TTC17-215ENST00000534417 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
TTC17-215ENST00000534417 USP31Q70CQ4 1352 aa13.44□□□□□ -0.26
TTC17-215ENST00000534417 PRKAR2BP31323 418 aa13.43□□□□□ -0.26
TTC17-215ENST00000534417 USP6P35125 1406 aa13.43□□□□□ -0.26
TTC17-215ENST00000534417 ATF7IPQ6VMQ6 1270 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms