RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
FOXRED1-218ENST00000534315 NCKAP5LQ9HCH0 1330 aa17.76■□□□□ 0.43
FOXRED1-218ENST00000534315 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
FOXRED1-218ENST00000534315 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
FOXRED1-218ENST00000534315 PLEKHF1Q96S99 279 aa17.75■□□□□ 0.43
FOXRED1-218ENST00000534315 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
FOXRED1-218ENST00000534315 MON2Q7Z3U7 1717 aa17.74■□□□□ 0.43
FOXRED1-218ENST00000534315 FBLN1P23142 703 aa17.74■□□□□ 0.43
FOXRED1-218ENST00000534315 CCDC61Q9Y6R9 512 aa17.74■□□□□ 0.43
FOXRED1-218ENST00000534315 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.73■□□□□ 0.43
FOXRED1-218ENST00000534315 POLKQ9UBT6 870 aa17.73■□□□□ 0.43
FOXRED1-218ENST00000534315 PRR36Q9H6K5 1346 aa17.73■□□□□ 0.43
FOXRED1-218ENST00000534315 MAP2P11137 1827 aaKnown RBP17.73■□□□□ 0.43
FOXRED1-218ENST00000534315 AKAP12Q02952 1782 aa17.72■□□□□ 0.43
FOXRED1-218ENST00000534315 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
FOXRED1-218ENST00000534315 NME9Q86XW9 330 aa17.72■□□□□ 0.43
FOXRED1-218ENST00000534315 SLIT1O75093 1534 aa17.72■□□□□ 0.43
FOXRED1-218ENST00000534315 ITSN1Q15811 1721 aa17.72■□□□□ 0.43
FOXRED1-218ENST00000534315 SLC26A8Q96RN1 970 aa17.72■□□□□ 0.43
FOXRED1-218ENST00000534315 EID1Q9Y6B2 187 aa17.72■□□□□ 0.43
FOXRED1-218ENST00000534315 ARHGAP23Q9P227 1491 aa17.72■□□□□ 0.43
FOXRED1-218ENST00000534315 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
FOXRED1-218ENST00000534315 PTPRUQ92729 1446 aa17.71■□□□□ 0.43
FOXRED1-218ENST00000534315 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
FOXRED1-218ENST00000534315 MSH5O43196 834 aa17.71■□□□□ 0.43
FOXRED1-218ENST00000534315 TMPOP42166 694 aaKnown RBP17.71■□□□□ 0.43
FOXRED1-218ENST00000534315 TCERG1O14776 1098 aaKnown RBP17.7■□□□□ 0.42
FOXRED1-218ENST00000534315 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
FOXRED1-218ENST00000534315 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
FOXRED1-218ENST00000534315 KDM2BQ8NHM5 1336 aa17.69■□□□□ 0.42
FOXRED1-218ENST00000534315 RARSP54136 660 aaKnown RBP17.69■□□□□ 0.42
FOXRED1-218ENST00000534315 TRIM35Q9UPQ4 493 aa17.68■□□□□ 0.42
FOXRED1-218ENST00000534315 LRRC7Q96NW7 1537 aa17.68■□□□□ 0.42
FOXRED1-218ENST00000534315 EMILIN1Q9Y6C2 1016 aa17.68■□□□□ 0.42
FOXRED1-218ENST00000534315 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
FOXRED1-218ENST00000534315 CANXP27824 592 aaKnown RBP17.67■□□□□ 0.42
FOXRED1-218ENST00000534315 PDE3AQ14432 1141 aa17.67■□□□□ 0.42
FOXRED1-218ENST00000534315 SKAP1Q86WV1 359 aa17.67■□□□□ 0.42
FOXRED1-218ENST00000534315 CENPQQ7L2Z9 268 aaPredicted RBP17.66■□□□□ 0.42
FOXRED1-218ENST00000534315 COG3Q96JB2 828 aa17.66■□□□□ 0.42
FOXRED1-218ENST00000534315 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
FOXRED1-218ENST00000534315 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
FOXRED1-218ENST00000534315 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
FOXRED1-218ENST00000534315 CDK12Q9NYV4 1490 aaPredicted RBP17.65■□□□□ 0.42
FOXRED1-218ENST00000534315 FCHSD2O94868 740 aa17.65■□□□□ 0.42
FOXRED1-218ENST00000534315 THEMISQ8N1K5 641 aaPredicted RBP17.65■□□□□ 0.42
FOXRED1-218ENST00000534315 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
FOXRED1-218ENST00000534315 NUTM2FA1L443 756 aa17.64■□□□□ 0.42
FOXRED1-218ENST00000534315 RIPK4P57078 832 aa17.64■□□□□ 0.42
FOXRED1-218ENST00000534315 PANK1Q8TE04 598 aa17.64■□□□□ 0.42
FOXRED1-218ENST00000534315 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.42
FOXRED1-218ENST00000534315 RSPH6AQ9H0K4 717 aa17.64■□□□□ 0.42
FOXRED1-218ENST00000534315 AMOTL2Q9Y2J4 779 aa17.64■□□□□ 0.42
FOXRED1-218ENST00000534315 TBX22Q9Y458 520 aa17.64■□□□□ 0.42
FOXRED1-218ENST00000534315 MS4A1P11836 297 aa17.64■□□□□ 0.41
FOXRED1-218ENST00000534315 NRKQ7Z2Y5 1582 aa17.64■□□□□ 0.41
FOXRED1-218ENST00000534315 PRKAR2BP31323 418 aa17.63■□□□□ 0.41
FOXRED1-218ENST00000534315 BCL2L13Q9BXK5 485 aa17.63■□□□□ 0.41
FOXRED1-218ENST00000534315 ACEP12821 1306 aa17.62■□□□□ 0.41
FOXRED1-218ENST00000534315 DIP2AQ14689 1571 aa17.62■□□□□ 0.41
FOXRED1-218ENST00000534315 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
FOXRED1-218ENST00000534315 RRS1Q15050 365 aaKnown RBP17.62■□□□□ 0.41
FOXRED1-218ENST00000534315 COG6Q9Y2V7 657 aa17.62■□□□□ 0.41
FOXRED1-218ENST00000534315 PLEKHG3A1L390 1219 aa17.62■□□□□ 0.41
FOXRED1-218ENST00000534315 IL13P35225 146 aa17.62■□□□□ 0.41
FOXRED1-218ENST00000534315 ANP32EQ9BTT0 268 aa17.62■□□□□ 0.41
FOXRED1-218ENST00000534315 IL16Q14005 1332 aa17.61■□□□□ 0.41
FOXRED1-218ENST00000534315 HMOX1P09601 288 aa17.61■□□□□ 0.41
FOXRED1-218ENST00000534315 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
FOXRED1-218ENST00000534315 PDE4AP27815 886 aa17.6■□□□□ 0.41
FOXRED1-218ENST00000534315 MYT1Q01538 1121 aa17.6■□□□□ 0.41
FOXRED1-218ENST00000534315 EXOSC9Q06265 439 aaKnown RBP17.6■□□□□ 0.41
FOXRED1-218ENST00000534315 TNNQ9UQP3 1299 aa17.6■□□□□ 0.41
FOXRED1-218ENST00000534315 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
FOXRED1-218ENST00000534315 USP6P35125 1406 aa17.59■□□□□ 0.41
FOXRED1-218ENST00000534315 CEP170BQ9Y4F5 1589 aaPredicted RBP17.59■□□□□ 0.41
FOXRED1-218ENST00000534315 NEFMP07197 916 aa17.59■□□□□ 0.41
FOXRED1-218ENST00000534315 RLBP1P12271 317 aa17.59■□□□□ 0.41
FOXRED1-218ENST00000534315 XRN1Q8IZH2 1706 aaKnown RBP17.58■□□□□ 0.41
FOXRED1-218ENST00000534315 CLUAP1Q96AJ1 413 aa17.58■□□□□ 0.4
FOXRED1-218ENST00000534315 PHACTR3Q96KR7 559 aa17.58■□□□□ 0.4
FOXRED1-218ENST00000534315 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.4
FOXRED1-218ENST00000534315 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.4
FOXRED1-218ENST00000534315 BACH2Q9BYV9 841 aa17.57■□□□□ 0.4
FOXRED1-218ENST00000534315 RIMS1Q86UR5 1692 aaKnown RBP17.57■□□□□ 0.4
FOXRED1-218ENST00000534315 NFE2L2Q16236 605 aa17.56■□□□□ 0.4
FOXRED1-218ENST00000534315 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
FOXRED1-218ENST00000534315 NALCNQ8IZF0 1738 aa17.55■□□□□ 0.4
FOXRED1-218ENST00000534315 RGPD8O14715 1765 aaPredicted RBP17.55■□□□□ 0.4
FOXRED1-218ENST00000534315 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
FOXRED1-218ENST00000534315 IGHDP01880 384 aa17.54■□□□□ 0.4
FOXRED1-218ENST00000534315 PMFBP1Q8TBY8 1022 aa17.54■□□□□ 0.4
FOXRED1-218ENST00000534315 SMC4Q9NTJ3 1288 aa17.54■□□□□ 0.4
FOXRED1-218ENST00000534315 ZKSCAN2Q63HK3 967 aa17.53■□□□□ 0.4
FOXRED1-218ENST00000534315 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
FOXRED1-218ENST00000534315 KCNA6P17658 529 aa17.52■□□□□ 0.4
FOXRED1-218ENST00000534315 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
FOXRED1-218ENST00000534315 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
FOXRED1-218ENST00000534315 THUMPD2Q9BTF0 503 aaKnown RBP17.51■□□□□ 0.39
FOXRED1-218ENST00000534315 PEAK1Q9H792 1746 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms