RNA–Protein interactions for RNA: ENST00000534207.5

CHID1-223, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,171 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-223ENST00000534207 KTN1Q86UP2 1357 aaKnown RBP24.87■■□□□ 1.57
CHID1-223ENST00000534207 KIF20BQ96Q89 1820 aa24.86■■□□□ 1.57
CHID1-223ENST00000534207 KRT28Q7Z3Y7 464 aa24.86■■□□□ 1.57
CHID1-223ENST00000534207 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
CHID1-223ENST00000534207 POLR3GLQ9BT43 218 aa24.85■■□□□ 1.57
CHID1-223ENST00000534207 TNS3Q68CZ2 1445 aa24.85■■□□□ 1.57
CHID1-223ENST00000534207 TTC21AQ8NDW8 1320 aa24.84■■□□□ 1.57
CHID1-223ENST00000534207 PIK3C2AO00443 1686 aa24.83■■□□□ 1.57
CHID1-223ENST00000534207 MED1Q15648 1581 aaPredicted RBP24.82■■□□□ 1.56
CHID1-223ENST00000534207 LRRC59Q96AG4 307 aaKnown RBP24.82■■□□□ 1.56
CHID1-223ENST00000534207 ANKRD26Q9UPS8 1709 aa24.82■■□□□ 1.56
CHID1-223ENST00000534207 ARHGEF10O15013 1369 aa24.81■■□□□ 1.56
CHID1-223ENST00000534207 SPATA31A3Q5VYP0 1347 aa24.81■■□□□ 1.56
CHID1-223ENST00000534207 CRYBG1Q9Y4K1 1723 aa24.81■■□□□ 1.56
CHID1-223ENST00000534207 DDX17Q92841 729 aaKnown RBP24.8■■□□□ 1.56
CHID1-223ENST00000534207 MARF1Q9Y4F3 1742 aaKnown RBP24.8■■□□□ 1.56
CHID1-223ENST00000534207 TTC21BQ7Z4L5 1316 aa24.79■■□□□ 1.56
CHID1-223ENST00000534207 PANK3Q9H999 370 aa24.78■■□□□ 1.56
CHID1-223ENST00000534207 ABCA3Q99758 1704 aa24.78■■□□□ 1.56
CHID1-223ENST00000534207 NSD3Q9BZ95 1437 aa24.77■■□□□ 1.56
CHID1-223ENST00000534207 HSPA1LP34931 641 aa24.76■■□□□ 1.55
CHID1-223ENST00000534207 JCADQ9P266 1359 aa24.76■■□□□ 1.55
CHID1-223ENST00000534207 XPCQ01831 940 aaPredicted RBP24.75■■□□□ 1.55
CHID1-223ENST00000534207 CARD14Q9BXL6 1004 aa24.75■■□□□ 1.55
CHID1-223ENST00000534207 USP31Q70CQ4 1352 aa24.75■■□□□ 1.55
CHID1-223ENST00000534207 PNPLA6Q8IY17 1366 aa24.74■■□□□ 1.55
CHID1-223ENST00000534207 PHRF1Q9P1Y6 1649 aaKnown RBP24.74■■□□□ 1.55
CHID1-223ENST00000534207 NSD2O96028 1365 aa24.73■■□□□ 1.55
CHID1-223ENST00000534207 NPC1L1Q9UHC9 1359 aa24.72■■□□□ 1.55
CHID1-223ENST00000534207 PER1O15534 1290 aaPredicted RBP24.72■■□□□ 1.55
CHID1-223ENST00000534207 CGNL1Q0VF96 1302 aa24.71■■□□□ 1.55
CHID1-223ENST00000534207 PAK3O75914 559 aaPredicted RBP24.71■■□□□ 1.55
CHID1-223ENST00000534207 SLIT3O75094 1523 aa24.71■■□□□ 1.55
CHID1-223ENST00000534207 OVOS2A0A0J9YW53 1432 aa24.7■■□□□ 1.55
CHID1-223ENST00000534207 OVOS2Q6IE36 1432 aa24.7■■□□□ 1.55
CHID1-223ENST00000534207 ABTB2Q8N961 1025 aa24.69■■□□□ 1.54
CHID1-223ENST00000534207 KNSTRNQ9Y448 316 aa24.69■■□□□ 1.54
CHID1-223ENST00000534207 USP19O94966 1318 aa24.68■■□□□ 1.54
CHID1-223ENST00000534207 NLRP13Q86W25 1043 aa24.68■■□□□ 1.54
CHID1-223ENST00000534207 SPATA31A6Q5VVP1 1343 aa24.67■■□□□ 1.54
CHID1-223ENST00000534207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.66■■□□□ 1.54
CHID1-223ENST00000534207 FYB1O15117 783 aa24.65■■□□□ 1.54
CHID1-223ENST00000534207 NME9Q86XW9 330 aa24.64■■□□□ 1.54
CHID1-223ENST00000534207 NLRP6P59044 892 aa24.63■■□□□ 1.53
CHID1-223ENST00000534207 DDX10Q13206 875 aaKnown RBP24.63■■□□□ 1.53
CHID1-223ENST00000534207 AMER1Q5JTC6 1135 aaPredicted RBP24.63■■□□□ 1.53
CHID1-223ENST00000534207 LMOD2Q6P5Q4 547 aa24.62■■□□□ 1.53
CHID1-223ENST00000534207 NFAT5O94916 1531 aa24.61■■□□□ 1.53
CHID1-223ENST00000534207 COG3Q96JB2 828 aa24.61■■□□□ 1.53
CHID1-223ENST00000534207 KCNH5Q8NCM2 988 aa24.6■■□□□ 1.53
CHID1-223ENST00000534207 LTN1O94822 1766 aa24.59■■□□□ 1.53
CHID1-223ENST00000534207 ABCC6O95255 1503 aa24.59■■□□□ 1.53
CHID1-223ENST00000534207 MAP2P11137 1827 aaKnown RBP24.58■■□□□ 1.53
CHID1-223ENST00000534207 GGNBP2Q9H3C7 697 aa24.57■■□□□ 1.52
CHID1-223ENST00000534207 CPDO75976 1380 aa24.56■■□□□ 1.52
CHID1-223ENST00000534207 COL14A1Q05707 1796 aaKnown RBP24.55■■□□□ 1.52
CHID1-223ENST00000534207 NUTM2GQ5VZR2 741 aa24.55■■□□□ 1.52
CHID1-223ENST00000534207 AATKQ6ZMQ8 1374 aa24.54■■□□□ 1.52
CHID1-223ENST00000534207 GCP02774 474 aa24.54■■□□□ 1.52
CHID1-223ENST00000534207 ZRANB1Q9UGI0 708 aa24.54■■□□□ 1.52
CHID1-223ENST00000534207 NWD2Q9ULI1 1742 aa24.53■■□□□ 1.52
CHID1-223ENST00000534207 LRP6O75581 1613 aa24.53■■□□□ 1.52
CHID1-223ENST00000534207 COL18A1P39060 1754 aa24.52■■□□□ 1.52
CHID1-223ENST00000534207 KIF24Q5T7B8 1368 aa24.51■■□□□ 1.51
CHID1-223ENST00000534207 PLCH1Q4KWH8 1693 aa24.5■■□□□ 1.51
CHID1-223ENST00000534207 LMO7Q8WWI1 1683 aa24.5■■□□□ 1.51
CHID1-223ENST00000534207 HAP1P54257 671 aaPredicted RBP24.5■■□□□ 1.51
CHID1-223ENST00000534207 CABLES1Q8TDN4 633 aa24.5■■□□□ 1.51
CHID1-223ENST00000534207 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
CHID1-223ENST00000534207 PARD3Q8TEW0 1356 aa24.49■■□□□ 1.51
CHID1-223ENST00000534207 SMG6Q86US8 1419 aaKnown RBP24.48■■□□□ 1.51
CHID1-223ENST00000534207 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.48■■□□□ 1.51
CHID1-223ENST00000534207 RTL1A6NKG5 1358 aa24.47■■□□□ 1.51
CHID1-223ENST00000534207 CC2D1BQ5T0F9 858 aaKnown RBP24.46■■□□□ 1.51
CHID1-223ENST00000534207 ARHGEF25Q86VW2 580 aa24.46■■□□□ 1.51
CHID1-223ENST00000534207 RGPD5Q99666 1765 aa24.45■■□□□ 1.5
CHID1-223ENST00000534207 RALBP1Q15311 655 aa24.45■■□□□ 1.5
CHID1-223ENST00000534207 NRAPQ86VF7 1730 aa24.44■■□□□ 1.5
CHID1-223ENST00000534207 KIAA0232Q92628 1395 aa24.44■■□□□ 1.5
CHID1-223ENST00000534207 PEAK1Q9H792 1746 aa24.44■■□□□ 1.5
CHID1-223ENST00000534207 FAM208AQ9UK61 1670 aaKnown RBP24.43■■□□□ 1.5
CHID1-223ENST00000534207 NUTM2BA6NNL0 878 aaPredicted RBP24.43■■□□□ 1.5
CHID1-223ENST00000534207 NUTM2EB1AL46 878 aaPredicted RBP24.43■■□□□ 1.5
CHID1-223ENST00000534207 NUTM2AQ8IVF1 878 aaPredicted RBP24.43■■□□□ 1.5
CHID1-223ENST00000534207 SLIT2O94813 1529 aa24.42■■□□□ 1.5
CHID1-223ENST00000534207 BLMP54132 1417 aaPredicted RBP24.42■■□□□ 1.5
CHID1-223ENST00000534207 PRDM11Q9NQV5 511 aa24.41■■□□□ 1.5
CHID1-223ENST00000534207 CDK12Q9NYV4 1490 aaPredicted RBP24.4■■□□□ 1.5
CHID1-223ENST00000534207 ZC3H6P61129 1189 aaKnown RBP24.4■■□□□ 1.5
CHID1-223ENST00000534207 MAP3K19Q56UN5 1328 aa24.39■■□□□ 1.5
CHID1-223ENST00000534207 FLT4P35916 1363 aa24.39■■□□□ 1.49
CHID1-223ENST00000534207 ADAMTS2O95450 1211 aa24.38■■□□□ 1.49
CHID1-223ENST00000534207 CAMTA1Q9Y6Y1 1673 aa24.37■■□□□ 1.49
CHID1-223ENST00000534207 FAM83GA6ND36 823 aa24.37■■□□□ 1.49
CHID1-223ENST00000534207 PLEKHG5O94827 1062 aa24.37■■□□□ 1.49
CHID1-223ENST00000534207 PRKRIP1Q9H875 184 aaPredicted RBP24.37■■□□□ 1.49
CHID1-223ENST00000534207 POLKQ9UBT6 870 aa24.37■■□□□ 1.49
CHID1-223ENST00000534207 SOX12O15370 315 aa24.36■■□□□ 1.49
CHID1-223ENST00000534207 MEX3CQ5U5Q3 659 aaKnown RBP24.36■■□□□ 1.49
CHID1-223ENST00000534207 FNBP4Q8N3X1 1017 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms