RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 TTC21AQ8NDW8 1320 aa21.54■■□□□ 1.04
CTTN-215ENST00000533931 ARHGEF10O15013 1369 aa21.53■■□□□ 1.04
CTTN-215ENST00000533931 SPATA31A3Q5VYP0 1347 aa21.53■■□□□ 1.04
CTTN-215ENST00000533931 HSPA1LP34931 641 aa21.52■■□□□ 1.04
CTTN-215ENST00000533931 DDX17Q92841 729 aaKnown RBP21.52■■□□□ 1.04
CTTN-215ENST00000533931 POLR3GLQ9BT43 218 aa21.52■■□□□ 1.04
CTTN-215ENST00000533931 ZNF316A6NFI3 1004 aaPredicted RBP21.51■■□□□ 1.03
CTTN-215ENST00000533931 JCADQ9P266 1359 aa21.49■■□□□ 1.03
CTTN-215ENST00000533931 ALS2Q96Q42 1657 aa21.49■■□□□ 1.03
CTTN-215ENST00000533931 TTC21BQ7Z4L5 1316 aa21.49■■□□□ 1.03
CTTN-215ENST00000533931 XPCQ01831 940 aaPredicted RBP21.48■■□□□ 1.03
CTTN-215ENST00000533931 MED1Q15648 1581 aaPredicted RBP21.48■■□□□ 1.03
CTTN-215ENST00000533931 COL22A1Q8NFW1 1626 aaPredicted RBP21.47■■□□□ 1.03
CTTN-215ENST00000533931 SHPRHQ149N8 1683 aa21.47■■□□□ 1.03
CTTN-215ENST00000533931 PANK3Q9H999 370 aa21.47■■□□□ 1.03
CTTN-215ENST00000533931 PNPLA6Q8IY17 1366 aa21.47■■□□□ 1.03
CTTN-215ENST00000533931 USP31Q70CQ4 1352 aa21.46■■□□□ 1.03
CTTN-215ENST00000533931 NSD3Q9BZ95 1437 aa21.46■■□□□ 1.03
CTTN-215ENST00000533931 CARD14Q9BXL6 1004 aa21.45■■□□□ 1.02
CTTN-215ENST00000533931 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
CTTN-215ENST00000533931 PAK3O75914 559 aaPredicted RBP21.44■■□□□ 1.02
CTTN-215ENST00000533931 CGNL1Q0VF96 1302 aa21.43■■□□□ 1.02
CTTN-215ENST00000533931 SPATA31A6Q5VVP1 1343 aa21.43■■□□□ 1.02
CTTN-215ENST00000533931 NSD2O96028 1365 aa21.43■■□□□ 1.02
CTTN-215ENST00000533931 PIK3C2AO00443 1686 aa21.43■■□□□ 1.02
CTTN-215ENST00000533931 ABTB2Q8N961 1025 aa21.42■■□□□ 1.02
CTTN-215ENST00000533931 USP19O94966 1318 aa21.41■■□□□ 1.02
CTTN-215ENST00000533931 NLRP13Q86W25 1043 aa21.41■■□□□ 1.02
CTTN-215ENST00000533931 NPC1L1Q9UHC9 1359 aa21.4■■□□□ 1.02
CTTN-215ENST00000533931 PER1O15534 1290 aaPredicted RBP21.4■■□□□ 1.02
CTTN-215ENST00000533931 KNSTRNQ9Y448 316 aa21.4■■□□□ 1.02
CTTN-215ENST00000533931 OVOS2A0A0J9YW53 1432 aa21.39■■□□□ 1.02
CTTN-215ENST00000533931 OVOS2Q6IE36 1432 aa21.39■■□□□ 1.02
CTTN-215ENST00000533931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.38■■□□□ 1.01
CTTN-215ENST00000533931 SLIT3O75094 1523 aa21.38■■□□□ 1.01
CTTN-215ENST00000533931 FYB1O15117 783 aa21.37■■□□□ 1.01
CTTN-215ENST00000533931 LMOD2Q6P5Q4 547 aa21.37■■□□□ 1.01
CTTN-215ENST00000533931 CRYBG1Q9Y4K1 1723 aa21.36■■□□□ 1.01
CTTN-215ENST00000533931 NLRP6P59044 892 aa21.36■■□□□ 1.01
CTTN-215ENST00000533931 NME9Q86XW9 330 aa21.36■■□□□ 1.01
CTTN-215ENST00000533931 KIF20BQ96Q89 1820 aa21.35■■□□□ 1.01
CTTN-215ENST00000533931 AMER1Q5JTC6 1135 aaPredicted RBP21.34■■□□□ 1.01
CTTN-215ENST00000533931 KCNH5Q8NCM2 988 aa21.34■■□□□ 1.01
CTTN-215ENST00000533931 COG3Q96JB2 828 aa21.34■■□□□ 1.01
CTTN-215ENST00000533931 PHRF1Q9P1Y6 1649 aaKnown RBP21.33■■□□□ 1.01
CTTN-215ENST00000533931 ABCA3Q99758 1704 aa21.33■■□□□ 1.01
CTTN-215ENST00000533931 MARF1Q9Y4F3 1742 aaKnown RBP21.32■■□□□ 1
CTTN-215ENST00000533931 DDX10Q13206 875 aaKnown RBP21.32■■□□□ 1
CTTN-215ENST00000533931 ANKRD26Q9UPS8 1709 aa21.31■■□□□ 1
CTTN-215ENST00000533931 CPDO75976 1380 aa21.31■■□□□ 1
CTTN-215ENST00000533931 NFAT5O94916 1531 aa21.29■■□□□ 1
CTTN-215ENST00000533931 GCP02774 474 aa21.29■■□□□ 1
CTTN-215ENST00000533931 NUTM2GQ5VZR2 741 aa21.29■■□□□ 1
CTTN-215ENST00000533931 GGNBP2Q9H3C7 697 aa21.29■■□□□ 1
CTTN-215ENST00000533931 ABCC6O95255 1503 aa21.28■■□□□ 1
CTTN-215ENST00000533931 AATKQ6ZMQ8 1374 aa21.27■■□□□ 1
CTTN-215ENST00000533931 LRP6O75581 1613 aa21.27■■□□□ 1
CTTN-215ENST00000533931 HAP1P54257 671 aaPredicted RBP21.27■■□□□ 1
CTTN-215ENST00000533931 ZRANB1Q9UGI0 708 aa21.27■■□□□ 1
CTTN-215ENST00000533931 CABLES1Q8TDN4 633 aa21.26■□□□□ 0.99
CTTN-215ENST00000533931 KIF24Q5T7B8 1368 aa21.24■□□□□ 0.99
CTTN-215ENST00000533931 MORC1Q86VD1 984 aa21.23■□□□□ 0.99
CTTN-215ENST00000533931 ARHGEF25Q86VW2 580 aa21.22■□□□□ 0.99
CTTN-215ENST00000533931 KIAA0232Q92628 1395 aa21.22■□□□□ 0.99
CTTN-215ENST00000533931 NUTM2BA6NNL0 878 aaPredicted RBP21.21■□□□□ 0.99
CTTN-215ENST00000533931 NUTM2EB1AL46 878 aaPredicted RBP21.21■□□□□ 0.99
CTTN-215ENST00000533931 NUTM2AQ8IVF1 878 aaPredicted RBP21.21■□□□□ 0.99
CTTN-215ENST00000533931 RTL1A6NKG5 1358 aa21.21■□□□□ 0.99
CTTN-215ENST00000533931 COL14A1Q05707 1796 aaKnown RBP21.2■□□□□ 0.99
CTTN-215ENST00000533931 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
CTTN-215ENST00000533931 PRDM11Q9NQV5 511 aa21.19■□□□□ 0.98
CTTN-215ENST00000533931 PARD3Q8TEW0 1356 aa21.19■□□□□ 0.98
CTTN-215ENST00000533931 ADAMTS2O95450 1211 aa21.18■□□□□ 0.98
CTTN-215ENST00000533931 CC2D1BQ5T0F9 858 aaKnown RBP21.18■□□□□ 0.98
CTTN-215ENST00000533931 ZC3H6P61129 1189 aaKnown RBP21.17■□□□□ 0.98
CTTN-215ENST00000533931 RALBP1Q15311 655 aa21.17■□□□□ 0.98
CTTN-215ENST00000533931 MEX3CQ5U5Q3 659 aaKnown RBP21.17■□□□□ 0.98
CTTN-215ENST00000533931 SLIT2O94813 1529 aa21.17■□□□□ 0.98
CTTN-215ENST00000533931 LMO7Q8WWI1 1683 aa21.17■□□□□ 0.98
CTTN-215ENST00000533931 BLMP54132 1417 aaPredicted RBP21.16■□□□□ 0.98
CTTN-215ENST00000533931 MAP3K19Q56UN5 1328 aa21.16■□□□□ 0.98
CTTN-215ENST00000533931 FNBP4Q8N3X1 1017 aaPredicted RBP21.16■□□□□ 0.98
CTTN-215ENST00000533931 NWD2Q9ULI1 1742 aa21.15■□□□□ 0.98
CTTN-215ENST00000533931 FAM83GA6ND36 823 aa21.15■□□□□ 0.98
CTTN-215ENST00000533931 PLEKHG5O94827 1062 aa21.15■□□□□ 0.98
CTTN-215ENST00000533931 SOX12O15370 315 aa21.14■□□□□ 0.97
CTTN-215ENST00000533931 COL18A1P39060 1754 aa21.13■□□□□ 0.97
CTTN-215ENST00000533931 FLT4P35916 1363 aa21.13■□□□□ 0.97
CTTN-215ENST00000533931 IP6K1Q92551 441 aa21.13■□□□□ 0.97
CTTN-215ENST00000533931 NGLY1Q96IV0 654 aa21.13■□□□□ 0.97
CTTN-215ENST00000533931 C8orf37Q96NL8 207 aa21.13■□□□□ 0.97
CTTN-215ENST00000533931 POLKQ9UBT6 870 aa21.13■□□□□ 0.97
CTTN-215ENST00000533931 CDK12Q9NYV4 1490 aaPredicted RBP21.13■□□□□ 0.97
CTTN-215ENST00000533931 LTN1O94822 1766 aa21.13■□□□□ 0.97
CTTN-215ENST00000533931 PLCH1Q4KWH8 1693 aa21.12■□□□□ 0.97
CTTN-215ENST00000533931 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.11■□□□□ 0.97
CTTN-215ENST00000533931 INSRP06213 1382 aa21.1■□□□□ 0.97
CTTN-215ENST00000533931 CAMTA1Q9Y6Y1 1673 aa21.1■□□□□ 0.97
CTTN-215ENST00000533931 AMPHP49418 695 aa21.1■□□□□ 0.97
CTTN-215ENST00000533931 RRS1Q15050 365 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms