RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
CMTM1-218ENST00000533915 MYOM1P52179 1685 aa19.38■□□□□ 0.69
CMTM1-218ENST00000533915 SPATA31A3Q5VYP0 1347 aa19.38■□□□□ 0.69
CMTM1-218ENST00000533915 TNS3Q68CZ2 1445 aa19.38■□□□□ 0.69
CMTM1-218ENST00000533915 EDC4Q6P2E9 1401 aaKnown RBP19.38■□□□□ 0.69
CMTM1-218ENST00000533915 CD163L1Q9NR16 1453 aa19.38■□□□□ 0.69
CMTM1-218ENST00000533915 JCADQ9P266 1359 aa19.38■□□□□ 0.69
CMTM1-218ENST00000533915 MON2Q7Z3U7 1717 aa19.37■□□□□ 0.69
CMTM1-218ENST00000533915 TTC21BQ7Z4L5 1316 aa19.36■□□□□ 0.69
CMTM1-218ENST00000533915 ABTB2Q8N961 1025 aa19.36■□□□□ 0.69
CMTM1-218ENST00000533915 PANK3Q9H999 370 aa19.36■□□□□ 0.69
CMTM1-218ENST00000533915 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
CMTM1-218ENST00000533915 NLRP13Q86W25 1043 aa19.33■□□□□ 0.68
CMTM1-218ENST00000533915 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.33■□□□□ 0.68
CMTM1-218ENST00000533915 KNSTRNQ9Y448 316 aa19.33■□□□□ 0.68
CMTM1-218ENST00000533915 SSH2Q76I76 1423 aa19.33■□□□□ 0.68
CMTM1-218ENST00000533915 CGNL1Q0VF96 1302 aa19.32■□□□□ 0.68
CMTM1-218ENST00000533915 SPATA31A6Q5VVP1 1343 aa19.31■□□□□ 0.68
CMTM1-218ENST00000533915 SHPRHQ149N8 1683 aa19.31■□□□□ 0.68
CMTM1-218ENST00000533915 HAP1P54257 671 aaPredicted RBP19.31■□□□□ 0.68
CMTM1-218ENST00000533915 NLRP6P59044 892 aa19.31■□□□□ 0.68
CMTM1-218ENST00000533915 NSD3Q9BZ95 1437 aa19.31■□□□□ 0.68
CMTM1-218ENST00000533915 PNPLA6Q8IY17 1366 aa19.31■□□□□ 0.68
CMTM1-218ENST00000533915 ALS2Q96Q42 1657 aa19.3■□□□□ 0.68
CMTM1-218ENST00000533915 NRKQ7Z2Y5 1582 aa19.3■□□□□ 0.68
CMTM1-218ENST00000533915 CARD14Q9BXL6 1004 aa19.29■□□□□ 0.68
CMTM1-218ENST00000533915 COG3Q96JB2 828 aa19.28■□□□□ 0.68
CMTM1-218ENST00000533915 COL22A1Q8NFW1 1626 aaPredicted RBP19.27■□□□□ 0.68
CMTM1-218ENST00000533915 NUTM2GQ5VZR2 741 aa19.26■□□□□ 0.67
CMTM1-218ENST00000533915 NME9Q86XW9 330 aa19.26■□□□□ 0.67
CMTM1-218ENST00000533915 KCNH5Q8NCM2 988 aa19.26■□□□□ 0.67
CMTM1-218ENST00000533915 NSD2O96028 1365 aa19.26■□□□□ 0.67
CMTM1-218ENST00000533915 USP31Q70CQ4 1352 aa19.26■□□□□ 0.67
CMTM1-218ENST00000533915 DDX10Q13206 875 aaKnown RBP19.25■□□□□ 0.67
CMTM1-218ENST00000533915 PIK3C2AO00443 1686 aa19.24■□□□□ 0.67
CMTM1-218ENST00000533915 MED1Q15648 1581 aaPredicted RBP19.24■□□□□ 0.67
CMTM1-218ENST00000533915 KIF20BQ96Q89 1820 aa19.24■□□□□ 0.67
CMTM1-218ENST00000533915 FYB1O15117 783 aa19.24■□□□□ 0.67
CMTM1-218ENST00000533915 NUTM2BA6NNL0 878 aaPredicted RBP19.23■□□□□ 0.67
CMTM1-218ENST00000533915 NUTM2EB1AL46 878 aaPredicted RBP19.23■□□□□ 0.67
CMTM1-218ENST00000533915 PLEKHG5O94827 1062 aa19.23■□□□□ 0.67
CMTM1-218ENST00000533915 NUTM2AQ8IVF1 878 aaPredicted RBP19.23■□□□□ 0.67
CMTM1-218ENST00000533915 USP19O94966 1318 aa19.23■□□□□ 0.67
CMTM1-218ENST00000533915 PER1O15534 1290 aaPredicted RBP19.21■□□□□ 0.67
CMTM1-218ENST00000533915 MEX3CQ5U5Q3 659 aaKnown RBP19.21■□□□□ 0.67
CMTM1-218ENST00000533915 CABLES1Q8TDN4 633 aa19.21■□□□□ 0.67
CMTM1-218ENST00000533915 GGNBP2Q9H3C7 697 aa19.21■□□□□ 0.67
CMTM1-218ENST00000533915 GCP02774 474 aa19.2■□□□□ 0.66
CMTM1-218ENST00000533915 USP54Q70EL1 1684 aa19.2■□□□□ 0.66
CMTM1-218ENST00000533915 NPC1L1Q9UHC9 1359 aa19.19■□□□□ 0.66
CMTM1-218ENST00000533915 OVOS2A0A0J9YW53 1432 aa19.19■□□□□ 0.66
CMTM1-218ENST00000533915 OVOS2Q6IE36 1432 aa19.19■□□□□ 0.66
CMTM1-218ENST00000533915 AMER1Q5JTC6 1135 aaPredicted RBP19.18■□□□□ 0.66
CMTM1-218ENST00000533915 MORC1Q86VD1 984 aa19.18■□□□□ 0.66
CMTM1-218ENST00000533915 ZRANB1Q9UGI0 708 aa19.18■□□□□ 0.66
CMTM1-218ENST00000533915 SLIT3O75094 1523 aa19.17■□□□□ 0.66
CMTM1-218ENST00000533915 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
CMTM1-218ENST00000533915 PHRF1Q9P1Y6 1649 aaKnown RBP19.17■□□□□ 0.66
CMTM1-218ENST00000533915 ABCA3Q99758 1704 aa19.16■□□□□ 0.66
CMTM1-218ENST00000533915 ANKRD26Q9UPS8 1709 aa19.15■□□□□ 0.66
CMTM1-218ENST00000533915 SOX12O15370 315 aa19.15■□□□□ 0.66
CMTM1-218ENST00000533915 CC2D1BQ5T0F9 858 aaKnown RBP19.15■□□□□ 0.66
CMTM1-218ENST00000533915 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
CMTM1-218ENST00000533915 CRYBG1Q9Y4K1 1723 aa19.14■□□□□ 0.66
CMTM1-218ENST00000533915 ZC3H6P61129 1189 aaKnown RBP19.14■□□□□ 0.65
CMTM1-218ENST00000533915 CPDO75976 1380 aa19.14■□□□□ 0.65
CMTM1-218ENST00000533915 NGLY1Q96IV0 654 aa19.13■□□□□ 0.65
CMTM1-218ENST00000533915 MARF1Q9Y4F3 1742 aaKnown RBP19.13■□□□□ 0.65
CMTM1-218ENST00000533915 KIAA0232Q92628 1395 aa19.12■□□□□ 0.65
CMTM1-218ENST00000533915 C8orf37Q96NL8 207 aa19.12■□□□□ 0.65
CMTM1-218ENST00000533915 LRP6O75581 1613 aa19.11■□□□□ 0.65
CMTM1-218ENST00000533915 ZBTB7CA1YPR0 619 aa19.11■□□□□ 0.65
CMTM1-218ENST00000533915 AATKQ6ZMQ8 1374 aa19.1■□□□□ 0.65
CMTM1-218ENST00000533915 CNGB1Q14028 1251 aaPredicted RBP19.1■□□□□ 0.65
CMTM1-218ENST00000533915 ARHGEF25Q86VW2 580 aa19.1■□□□□ 0.65
CMTM1-218ENST00000533915 NFAT5O94916 1531 aa19.1■□□□□ 0.65
CMTM1-218ENST00000533915 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
CMTM1-218ENST00000533915 AMPHP49418 695 aa19.09■□□□□ 0.65
CMTM1-218ENST00000533915 COL14A1Q05707 1796 aaKnown RBP19.09■□□□□ 0.65
CMTM1-218ENST00000533915 KIF24Q5T7B8 1368 aa19.08■□□□□ 0.65
CMTM1-218ENST00000533915 FAM83GA6ND36 823 aa19.08■□□□□ 0.64
CMTM1-218ENST00000533915 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
CMTM1-218ENST00000533915 ABCC6O95255 1503 aa19.07■□□□□ 0.64
CMTM1-218ENST00000533915 RALBP1Q15311 655 aa19.07■□□□□ 0.64
CMTM1-218ENST00000533915 CHRNA2Q15822 529 aa19.06■□□□□ 0.64
CMTM1-218ENST00000533915 LTN1O94822 1766 aa19.06■□□□□ 0.64
CMTM1-218ENST00000533915 RTL1A6NKG5 1358 aa19.06■□□□□ 0.64
CMTM1-218ENST00000533915 MAP3K19Q56UN5 1328 aa19.05■□□□□ 0.64
CMTM1-218ENST00000533915 MAP2P11137 1827 aaKnown RBP19.05■□□□□ 0.64
CMTM1-218ENST00000533915 EVA1CP58658 441 aa19.05■□□□□ 0.64
CMTM1-218ENST00000533915 RRS1Q15050 365 aaKnown RBP19.05■□□□□ 0.64
CMTM1-218ENST00000533915 ZNF772Q68DY9 489 aaPredicted RBP19.05■□□□□ 0.64
CMTM1-218ENST00000533915 FNBP4Q8N3X1 1017 aaPredicted RBP19.05■□□□□ 0.64
CMTM1-218ENST00000533915 BTG4Q9NY30 223 aa19.05■□□□□ 0.64
CMTM1-218ENST00000533915 AFF2P51816 1311 aa19.04■□□□□ 0.64
CMTM1-218ENST00000533915 PPM1GO15355 546 aaPredicted RBP19.04■□□□□ 0.64
CMTM1-218ENST00000533915 IP6K1Q92551 441 aa19.04■□□□□ 0.64
CMTM1-218ENST00000533915 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
CMTM1-218ENST00000533915 USP21Q9UK80 565 aa19.03■□□□□ 0.64
CMTM1-218ENST00000533915 FLT4P35916 1363 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms