RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 THSD7AQ9UPZ6 1657 aa15.08■□□□□ 0
CLP1-206ENST00000533905 COL14A1Q05707 1796 aaKnown RBP15.08■□□□□ 0
CLP1-206ENST00000533905 CHRNA2Q15822 529 aa15.07■□□□□ 0
CLP1-206ENST00000533905 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
CLP1-206ENST00000533905 NRKQ7Z2Y5 1582 aa15.07■□□□□ 0
CLP1-206ENST00000533905 NUDT16Q96DE0 195 aaKnown RBP15.06■□□□□ 0
CLP1-206ENST00000533905 KIAA0232Q92628 1395 aa15.06■□□□□ 0
CLP1-206ENST00000533905 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
CLP1-206ENST00000533905 KRT27Q7Z3Y8 459 aa15.04■□□□□ -0
CLP1-206ENST00000533905 CDK19Q9BWU1 502 aa15.04■□□□□ -0
CLP1-206ENST00000533905 GPRASP1Q5JY77 1395 aa15.03■□□□□ -0
CLP1-206ENST00000533905 NGDNQ8NEJ9 315 aaKnown RBP15.03■□□□□ -0
CLP1-206ENST00000533905 ITSN1Q15811 1721 aa15.03■□□□□ -0
CLP1-206ENST00000533905 TNS1Q9HBL0 1735 aaKnown RBP15.03■□□□□ -0
CLP1-206ENST00000533905 POLR3AO14802 1390 aaPredicted RBP15.02■□□□□ -0
CLP1-206ENST00000533905 SPATA31A5Q5VU36 1347 aa15.02■□□□□ -0
CLP1-206ENST00000533905 SPATA31A7Q8IWB4 1347 aa15.02■□□□□ -0
CLP1-206ENST00000533905 ZC3H6P61129 1189 aaKnown RBP15.02■□□□□ -0
CLP1-206ENST00000533905 ACEP12821 1306 aa15.01□□□□□ -0.01
CLP1-206ENST00000533905 CAMTA1Q9Y6Y1 1673 aa15.01□□□□□ -0.01
CLP1-206ENST00000533905 PSDA5PKW4 1024 aaPredicted RBP15.01□□□□□ -0.01
CLP1-206ENST00000533905 ZRANB1Q9UGI0 708 aa15.01□□□□□ -0.01
CLP1-206ENST00000533905 KIAA1210Q9ULL0 1709 aa15□□□□□ -0.01
CLP1-206ENST00000533905 LMO7Q8WWI1 1683 aa15□□□□□ -0.01
CLP1-206ENST00000533905 A0A0G2JS52 829 aa15□□□□□ -0.01
CLP1-206ENST00000533905 HRCP23327 699 aa15□□□□□ -0.01
CLP1-206ENST00000533905 MYT1Q01538 1121 aa15□□□□□ -0.01
CLP1-206ENST00000533905 EIF3AQ14152 1382 aaKnown RBP14.99□□□□□ -0.01
CLP1-206ENST00000533905 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
CLP1-206ENST00000533905 QRICH2Q9H0J4 1663 aa14.98□□□□□ -0.01
CLP1-206ENST00000533905 NBPF8Q3BBV2 869 aa14.98□□□□□ -0.01
CLP1-206ENST00000533905 CCDC125Q86Z20 511 aa14.98□□□□□ -0.01
CLP1-206ENST00000533905 SIN3AQ96ST3 1273 aa14.98□□□□□ -0.01
CLP1-206ENST00000533905 PRDM11Q9NQV5 511 aa14.98□□□□□ -0.01
CLP1-206ENST00000533905 STRN4Q9NRL3 753 aa14.98□□□□□ -0.01
CLP1-206ENST00000533905 SPATA31A1Q5TZJ5 1347 aa14.97□□□□□ -0.01
CLP1-206ENST00000533905 EN1Q05925 392 aaPredicted RBP14.97□□□□□ -0.01
CLP1-206ENST00000533905 PPIP5K1Q6PFW1 1433 aa14.97□□□□□ -0.01
CLP1-206ENST00000533905 USP19O94966 1318 aa14.96□□□□□ -0.01
CLP1-206ENST00000533905 SSH2Q76I76 1423 aa14.96□□□□□ -0.01
CLP1-206ENST00000533905 PLEKHG3A1L390 1219 aa14.95□□□□□ -0.02
CLP1-206ENST00000533905 LARP1Q6PKG0 1096 aaKnown RBP14.95□□□□□ -0.02
CLP1-206ENST00000533905 L3MBTL2Q969R5 705 aa14.95□□□□□ -0.02
CLP1-206ENST00000533905 USP35Q9P2H5 1018 aa14.95□□□□□ -0.02
CLP1-206ENST00000533905 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
CLP1-206ENST00000533905 PIK3C2AO00443 1686 aa14.94□□□□□ -0.02
CLP1-206ENST00000533905 RGPD1P0DJD0 1748 aa14.94□□□□□ -0.02
CLP1-206ENST00000533905 EZH2Q15910 746 aaKnown RBP14.93□□□□□ -0.02
CLP1-206ENST00000533905 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
CLP1-206ENST00000533905 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
CLP1-206ENST00000533905 UTRNP46939 3433 aa14.92□□□□□ -0.02
CLP1-206ENST00000533905 LRP5O75197 1615 aa14.92□□□□□ -0.02
CLP1-206ENST00000533905 SLIT3O75094 1523 aa14.92□□□□□ -0.02
CLP1-206ENST00000533905 COL5A2P05997 1499 aaPredicted RBP14.91□□□□□ -0.02
CLP1-206ENST00000533905 DISP2A7MBM2 1401 aa14.91□□□□□ -0.02
CLP1-206ENST00000533905 USP6P35125 1406 aa14.91□□□□□ -0.02
CLP1-206ENST00000533905 CPDO75976 1380 aa14.9□□□□□ -0.02
CLP1-206ENST00000533905 TRIM37O94972 964 aa14.9□□□□□ -0.02
CLP1-206ENST00000533905 SRPK2P78362 688 aaKnown RBP14.9□□□□□ -0.02
CLP1-206ENST00000533905 R3HDM1Q15032 1099 aaKnown RBP14.9□□□□□ -0.02
CLP1-206ENST00000533905 PTF1AQ7RTS3 328 aa14.9□□□□□ -0.02
CLP1-206ENST00000533905 ABTB2Q8N961 1025 aa14.9□□□□□ -0.02
CLP1-206ENST00000533905 STAC3Q96MF2 364 aa14.9□□□□□ -0.02
CLP1-206ENST00000533905 CABP1Q9NZU7 370 aa14.9□□□□□ -0.02
CLP1-206ENST00000533905 COL18A1P39060 1754 aa14.89□□□□□ -0.03
CLP1-206ENST00000533905 LRRC37A3O60309 1634 aa14.88□□□□□ -0.03
CLP1-206ENST00000533905 RREB1Q92766 1687 aa14.88□□□□□ -0.03
CLP1-206ENST00000533905 GCP02774 474 aa14.88□□□□□ -0.03
CLP1-206ENST00000533905 SF3B2Q13435 895 aaKnown RBP14.88□□□□□ -0.03
CLP1-206ENST00000533905 CAMKK2Q96RR4 588 aa14.88□□□□□ -0.03
CLP1-206ENST00000533905 NUP188Q5SRE5 1749 aa14.88□□□□□ -0.03
CLP1-206ENST00000533905 PEAK1Q9H792 1746 aa14.88□□□□□ -0.03
CLP1-206ENST00000533905 ZBTB7CA1YPR0 619 aa14.87□□□□□ -0.03
CLP1-206ENST00000533905 BAG6P46379 1132 aa14.87□□□□□ -0.03
CLP1-206ENST00000533905 AXIN2Q9Y2T1 843 aa14.87□□□□□ -0.03
CLP1-206ENST00000533905 NEUROD1Q13562 356 aa14.86□□□□□ -0.03
CLP1-206ENST00000533905 PARP4Q9UKK3 1724 aaKnown RBP14.85□□□□□ -0.03
CLP1-206ENST00000533905 CD163L1Q9NR16 1453 aa14.84□□□□□ -0.03
CLP1-206ENST00000533905 NFAT5O94916 1531 aa14.84□□□□□ -0.03
CLP1-206ENST00000533905 SOX12O15370 315 aa14.83□□□□□ -0.04
CLP1-206ENST00000533905 BARGINQ6ZT62 677 aa14.83□□□□□ -0.04
CLP1-206ENST00000533905 AKAP12Q02952 1782 aa14.83□□□□□ -0.04
CLP1-206ENST00000533905 WNK3Q9BYP7 1800 aa14.82□□□□□ -0.04
CLP1-206ENST00000533905 TCP11L2Q8N4U5 519 aa14.82□□□□□ -0.04
CLP1-206ENST00000533905 CPSF1Q10570 1443 aaKnown RBP14.82□□□□□ -0.04
CLP1-206ENST00000533905 RGPD5Q99666 1765 aa14.81□□□□□ -0.04
CLP1-206ENST00000533905 APBA3O96018 575 aa14.81□□□□□ -0.04
CLP1-206ENST00000533905 EVA1CP58658 441 aa14.81□□□□□ -0.04
CLP1-206ENST00000533905 NLRP6P59044 892 aa14.81□□□□□ -0.04
CLP1-206ENST00000533905 TTC21BQ7Z4L5 1316 aa14.81□□□□□ -0.04
CLP1-206ENST00000533905 ROCK2O75116 1388 aaKnown RBP14.81□□□□□ -0.04
CLP1-206ENST00000533905 CRB1P82279 1406 aa14.81□□□□□ -0.04
CLP1-206ENST00000533905 NLRP13Q86W25 1043 aa14.8□□□□□ -0.04
CLP1-206ENST00000533905 ANO8Q9HCE9 1232 aaPredicted RBP14.8□□□□□ -0.04
CLP1-206ENST00000533905 AATKQ6ZMQ8 1374 aa14.8□□□□□ -0.04
CLP1-206ENST00000533905 FAM196AQ6ZSG2 479 aa14.79□□□□□ -0.04
CLP1-206ENST00000533905 GOLGB1Q14789 3259 aaKnown RBP14.79□□□□□ -0.04
CLP1-206ENST00000533905 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
CLP1-206ENST00000533905 PDGFDQ9GZP0 370 aaPredicted RBP14.78□□□□□ -0.04
CLP1-206ENST00000533905 ARHGEF25Q86VW2 580 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms