RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 PSME1Q06323 249 aa30.21■■■□□ 2.43
VPS51-212ENST00000533656 CPSF1Q10570 1443 aaKnown RBP30.21■■■□□ 2.43
VPS51-212ENST00000533656 CCDC7Q96M83 1385 aa30.2■■■□□ 2.43
VPS51-212ENST00000533656 HDGFL2Q7Z4V5 671 aaPredicted RBP30.2■■■□□ 2.43
VPS51-212ENST00000533656 SLC12A5Q9H2X9 1139 aa30.2■■■□□ 2.43
VPS51-212ENST00000533656 MARF1Q9Y4F3 1742 aaKnown RBP30.19■■■□□ 2.42
VPS51-212ENST00000533656 ADAMTS2O95450 1211 aa30.19■■■□□ 2.42
VPS51-212ENST00000533656 POLR3GLQ9BT43 218 aa30.19■■■□□ 2.42
VPS51-212ENST00000533656 ANKRD36BQ8N2N9 1353 aa30.18■■■□□ 2.42
VPS51-212ENST00000533656 XPCQ01831 940 aaPredicted RBP30.18■■■□□ 2.42
VPS51-212ENST00000533656 KRT28Q7Z3Y7 464 aa30.18■■■□□ 2.42
VPS51-212ENST00000533656 SBNO1A3KN83 1393 aa30.17■■■□□ 2.42
VPS51-212ENST00000533656 RXRBP28702 533 aa30.17■■■□□ 2.42
VPS51-212ENST00000533656 CD163L1Q9NR16 1453 aa30.17■■■□□ 2.42
VPS51-212ENST00000533656 WASHC2AQ641Q2 1341 aa30.17■■■□□ 2.42
VPS51-212ENST00000533656 USP6P35125 1406 aa30.16■■■□□ 2.42
VPS51-212ENST00000533656 MYOM1P52179 1685 aa30.16■■■□□ 2.42
VPS51-212ENST00000533656 CDK12Q9NYV4 1490 aaPredicted RBP30.15■■■□□ 2.42
VPS51-212ENST00000533656 A0A1W2PP64 1363 aa30.14■■■□□ 2.41
VPS51-212ENST00000533656 KTN1Q86UP2 1357 aaKnown RBP30.14■■■□□ 2.41
VPS51-212ENST00000533656 AKAP12Q02952 1782 aa30.13■■■□□ 2.41
VPS51-212ENST00000533656 RGS12O14924 1447 aa30.13■■■□□ 2.41
VPS51-212ENST00000533656 TNS3Q68CZ2 1445 aa30.11■■■□□ 2.41
VPS51-212ENST00000533656 NGLY1Q96IV0 654 aa30.1■■■□□ 2.41
VPS51-212ENST00000533656 EDC4Q6P2E9 1401 aaKnown RBP30.1■■■□□ 2.41
VPS51-212ENST00000533656 SPATA31A3Q5VYP0 1347 aa30.09■■■□□ 2.41
VPS51-212ENST00000533656 SSH2Q76I76 1423 aa30.09■■■□□ 2.41
VPS51-212ENST00000533656 MON2Q7Z3U7 1717 aa30.09■■■□□ 2.41
VPS51-212ENST00000533656 QTRT2Q9H974 415 aaKnown RBP30.09■■■□□ 2.41
VPS51-212ENST00000533656 TRPM3Q9HCF6 1732 aaPredicted RBP30.08■■■□□ 2.41
VPS51-212ENST00000533656 ARHGEF10O15013 1369 aa30.08■■■□□ 2.41
VPS51-212ENST00000533656 TTC21AQ8NDW8 1320 aa30.07■■■□□ 2.4
VPS51-212ENST00000533656 NRKQ7Z2Y5 1582 aa30.06■■■□□ 2.4
VPS51-212ENST00000533656 UPF1Q92900 1129 aaKnown RBP eCLIP30.05■■■□□ 2.4
VPS51-212ENST00000533656 TTC21BQ7Z4L5 1316 aa30.04■■■□□ 2.4
VPS51-212ENST00000533656 PAK3O75914 559 aaPredicted RBP30.04■■■□□ 2.4
VPS51-212ENST00000533656 ZNF316A6NFI3 1004 aaPredicted RBP30.03■■■□□ 2.4
VPS51-212ENST00000533656 RBM6P78332 1123 aaKnown RBP30.03■■■□□ 2.4
VPS51-212ENST00000533656 ABCA3Q99758 1704 aa30.02■■■□□ 2.4
VPS51-212ENST00000533656 PANK3Q9H999 370 aa30.01■■■□□ 2.39
VPS51-212ENST00000533656 USP21Q9UK80 565 aa30.01■■■□□ 2.39
VPS51-212ENST00000533656 ALS2Q96Q42 1657 aa30.01■■■□□ 2.39
VPS51-212ENST00000533656 ATRNO75882 1429 aa30■■■□□ 2.39
VPS51-212ENST00000533656 FNBP4Q8N3X1 1017 aaPredicted RBP29.99■■■□□ 2.39
VPS51-212ENST00000533656 NSD3Q9BZ95 1437 aa29.98■■■□□ 2.39
VPS51-212ENST00000533656 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.98■■■□□ 2.39
VPS51-212ENST00000533656 LMOD2Q6P5Q4 547 aa29.97■■■□□ 2.39
VPS51-212ENST00000533656 ABTB2Q8N961 1025 aa29.97■■■□□ 2.39
VPS51-212ENST00000533656 BCL9LQ86UU0 1499 aa29.97■■■□□ 2.39
VPS51-212ENST00000533656 CARD14Q9BXL6 1004 aa29.96■■■□□ 2.39
VPS51-212ENST00000533656 NLRP13Q86W25 1043 aa29.94■■■□□ 2.38
VPS51-212ENST00000533656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.94■■■□□ 2.38
VPS51-212ENST00000533656 EP400Q96L91 3159 aa29.93■■■□□ 2.38
VPS51-212ENST00000533656 USP31Q70CQ4 1352 aa29.93■■■□□ 2.38
VPS51-212ENST00000533656 TRPC5Q9UL62 973 aaPredicted RBP29.93■■■□□ 2.38
VPS51-212ENST00000533656 CGNL1Q0VF96 1302 aa29.93■■■□□ 2.38
VPS51-212ENST00000533656 PIK3C2AO00443 1686 aa29.91■■■□□ 2.38
VPS51-212ENST00000533656 PLCH1Q4KWH8 1693 aa29.91■■■□□ 2.38
VPS51-212ENST00000533656 KNSTRNQ9Y448 316 aa29.91■■■□□ 2.38
VPS51-212ENST00000533656 NLRP6P59044 892 aa29.9■■■□□ 2.38
VPS51-212ENST00000533656 NSD2O96028 1365 aa29.9■■■□□ 2.38
VPS51-212ENST00000533656 USP19O94966 1318 aa29.89■■■□□ 2.38
VPS51-212ENST00000533656 SLIT2O94813 1529 aa29.88■■■□□ 2.37
VPS51-212ENST00000533656 NME9Q86XW9 330 aa29.88■■■□□ 2.37
VPS51-212ENST00000533656 USP54Q70EL1 1684 aa29.88■■■□□ 2.37
VPS51-212ENST00000533656 GLI3P10071 1580 aa29.87■■■□□ 2.37
VPS51-212ENST00000533656 FYB1O15117 783 aa29.86■■■□□ 2.37
VPS51-212ENST00000533656 PER1O15534 1290 aaPredicted RBP29.86■■■□□ 2.37
VPS51-212ENST00000533656 PLEKHG5O94827 1062 aa29.86■■■□□ 2.37
VPS51-212ENST00000533656 CABLES1Q8TDN4 633 aa29.86■■■□□ 2.37
VPS51-212ENST00000533656 OVOS2A0A0J9YW53 1432 aa29.86■■■□□ 2.37
VPS51-212ENST00000533656 OVOS2Q6IE36 1432 aa29.86■■■□□ 2.37
VPS51-212ENST00000533656 COG3Q96JB2 828 aa29.85■■■□□ 2.37
VPS51-212ENST00000533656 CRYBG1Q9Y4K1 1723 aa29.83■■■□□ 2.37
VPS51-212ENST00000533656 SLIT3O75094 1523 aa29.83■■■□□ 2.37
VPS51-212ENST00000533656 NPC1L1Q9UHC9 1359 aa29.83■■■□□ 2.37
VPS51-212ENST00000533656 NUTM2GQ5VZR2 741 aa29.83■■■□□ 2.37
VPS51-212ENST00000533656 NWD2Q9ULI1 1742 aa29.82■■■□□ 2.36
VPS51-212ENST00000533656 HAP1P54257 671 aaPredicted RBP29.82■■■□□ 2.36
VPS51-212ENST00000533656 KCNH5Q8NCM2 988 aa29.82■■■□□ 2.36
VPS51-212ENST00000533656 KIF20BQ96Q89 1820 aa29.82■■■□□ 2.36
VPS51-212ENST00000533656 DDX10Q13206 875 aaKnown RBP29.81■■■□□ 2.36
VPS51-212ENST00000533656 BRWD3Q6RI45 1802 aa29.8■■■□□ 2.36
VPS51-212ENST00000533656 AMER1Q5JTC6 1135 aaPredicted RBP29.8■■■□□ 2.36
VPS51-212ENST00000533656 PHRF1Q9P1Y6 1649 aaKnown RBP29.79■■■□□ 2.36
VPS51-212ENST00000533656 GGNBP2Q9H3C7 697 aa29.79■■■□□ 2.36
VPS51-212ENST00000533656 GJD4Q96KN9 370 aaPredicted RBP29.78■■■□□ 2.36
VPS51-212ENST00000533656 NRAPQ86VF7 1730 aa29.77■■■□□ 2.36
VPS51-212ENST00000533656 GCP02774 474 aa29.77■■■□□ 2.36
VPS51-212ENST00000533656 UNC5CLQ8IV45 518 aa29.77■■■□□ 2.36
VPS51-212ENST00000533656 ZRANB1Q9UGI0 708 aa29.77■■■□□ 2.36
VPS51-212ENST00000533656 CPDO75976 1380 aa29.74■■■□□ 2.35
VPS51-212ENST00000533656 ANKRD26Q9UPS8 1709 aa29.73■■■□□ 2.35
VPS51-212ENST00000533656 NFAT5O94916 1531 aa29.71■■■□□ 2.35
VPS51-212ENST00000533656 MORC1Q86VD1 984 aa29.69■■■□□ 2.34
VPS51-212ENST00000533656 COL14A1Q05707 1796 aaKnown RBP29.69■■■□□ 2.34
VPS51-212ENST00000533656 AATKQ6ZMQ8 1374 aa29.67■■■□□ 2.34
VPS51-212ENST00000533656 KIAA0232Q92628 1395 aa29.67■■■□□ 2.34
VPS51-212ENST00000533656 FAM83GA6ND36 823 aa29.66■■■□□ 2.34
VPS51-212ENST00000533656 ZC3H6P61129 1189 aaKnown RBP29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms