RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 BACH2Q9BYV9 841 aa25■■□□□ 1.59
UBXN1-215ENST00000533476 NOP58Q9Y2X3 529 aaKnown RBP25■■□□□ 1.59
UBXN1-215ENST00000533476 CPSF1Q10570 1443 aaKnown RBP24.99■■□□□ 1.59
UBXN1-215ENST00000533476 MYH16Q9H6N6 1097 aa24.99■■□□□ 1.59
UBXN1-215ENST00000533476 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
UBXN1-215ENST00000533476 WASLO00401 505 aaPredicted RBP24.98■■□□□ 1.59
UBXN1-215ENST00000533476 U2SURPO15042 1029 aaKnown RBP24.98■■□□□ 1.59
UBXN1-215ENST00000533476 RARSP54136 660 aaKnown RBP24.98■■□□□ 1.59
UBXN1-215ENST00000533476 EDC4Q6P2E9 1401 aaKnown RBP24.97■■□□□ 1.59
UBXN1-215ENST00000533476 PPIP5K1Q6PFW1 1433 aa24.97■■□□□ 1.59
UBXN1-215ENST00000533476 DIAPH1O60610 1272 aaKnown RBP24.95■■□□□ 1.58
UBXN1-215ENST00000533476 IPO9Q96P70 1041 aaKnown RBP24.95■■□□□ 1.58
UBXN1-215ENST00000533476 CANXP27824 592 aaKnown RBP24.94■■□□□ 1.58
UBXN1-215ENST00000533476 MAPK8IP3Q9UPT6 1336 aa24.94■■□□□ 1.58
UBXN1-215ENST00000533476 MON2Q7Z3U7 1717 aa24.94■■□□□ 1.58
UBXN1-215ENST00000533476 TMPOP42166 694 aaKnown RBP24.93■■□□□ 1.58
UBXN1-215ENST00000533476 TXNDC2Q86VQ3 553 aa24.92■■□□□ 1.58
UBXN1-215ENST00000533476 PNNQ9H307 717 aaKnown RBP24.92■■□□□ 1.58
UBXN1-215ENST00000533476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.92■■□□□ 1.58
UBXN1-215ENST00000533476 CT47B1P0C2W7 299 aaPredicted RBP24.91■■□□□ 1.58
UBXN1-215ENST00000533476 SKAP1Q86WV1 359 aa24.91■■□□□ 1.58
UBXN1-215ENST00000533476 ADAMTS13Q76LX8 1427 aa24.91■■□□□ 1.58
UBXN1-215ENST00000533476 AKAP12Q02952 1782 aa24.91■■□□□ 1.58
UBXN1-215ENST00000533476 LRRC7Q96NW7 1537 aa24.9■■□□□ 1.58
UBXN1-215ENST00000533476 IL16Q14005 1332 aa24.89■■□□□ 1.58
UBXN1-215ENST00000533476 AAMPQ13685 434 aa24.89■■□□□ 1.58
UBXN1-215ENST00000533476 TRIM35Q9UPQ4 493 aa24.89■■□□□ 1.58
UBXN1-215ENST00000533476 ITSN1Q15811 1721 aa24.89■■□□□ 1.57
UBXN1-215ENST00000533476 PLPPR3Q6T4P5 718 aa24.88■■□□□ 1.57
UBXN1-215ENST00000533476 PANK1Q8TE04 598 aa24.88■■□□□ 1.57
UBXN1-215ENST00000533476 NUDT16Q96DE0 195 aaKnown RBP24.88■■□□□ 1.57
UBXN1-215ENST00000533476 POLKQ9UBT6 870 aa24.88■■□□□ 1.57
UBXN1-215ENST00000533476 PLEKHG1Q9ULL1 1385 aa24.88■■□□□ 1.57
UBXN1-215ENST00000533476 MAP2P11137 1827 aaKnown RBP24.87■■□□□ 1.57
UBXN1-215ENST00000533476 FRAT1Q92837 279 aaPredicted RBP24.87■■□□□ 1.57
UBXN1-215ENST00000533476 CLUAP1Q96AJ1 413 aa24.87■■□□□ 1.57
UBXN1-215ENST00000533476 C3P01024 1663 aa24.87■■□□□ 1.57
UBXN1-215ENST00000533476 CCDC61Q9Y6R9 512 aa24.86■■□□□ 1.57
UBXN1-215ENST00000533476 CDK12Q9NYV4 1490 aaPredicted RBP24.86■■□□□ 1.57
UBXN1-215ENST00000533476 FCHSD2O94868 740 aa24.86■■□□□ 1.57
UBXN1-215ENST00000533476 COG6Q9Y2V7 657 aa24.86■■□□□ 1.57
UBXN1-215ENST00000533476 AATKQ6ZMQ8 1374 aa24.86■■□□□ 1.57
UBXN1-215ENST00000533476 ROBO2Q9HCK4 1378 aa24.85■■□□□ 1.57
UBXN1-215ENST00000533476 TOPAZ1Q8N9V7 1692 aa24.83■■□□□ 1.56
UBXN1-215ENST00000533476 PAK3O75914 559 aaPredicted RBP24.82■■□□□ 1.56
UBXN1-215ENST00000533476 RIPK4P57078 832 aa24.82■■□□□ 1.56
UBXN1-215ENST00000533476 NME9Q86XW9 330 aa24.82■■□□□ 1.56
UBXN1-215ENST00000533476 RSPH6AQ9H0K4 717 aa24.82■■□□□ 1.56
UBXN1-215ENST00000533476 ZBTB47Q9UFB7 747 aaPredicted RBP24.82■■□□□ 1.56
UBXN1-215ENST00000533476 TSR2Q969E8 191 aaKnown RBP24.81■■□□□ 1.56
UBXN1-215ENST00000533476 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.81■■□□□ 1.56
UBXN1-215ENST00000533476 PRR36Q9H6K5 1346 aa24.8■■□□□ 1.56
UBXN1-215ENST00000533476 IGHDP01880 384 aa24.8■■□□□ 1.56
UBXN1-215ENST00000533476 BCL2L13Q9BXK5 485 aa24.8■■□□□ 1.56
UBXN1-215ENST00000533476 SLIT1O75093 1534 aa24.8■■□□□ 1.56
UBXN1-215ENST00000533476 NRKQ7Z2Y5 1582 aa24.79■■□□□ 1.56
UBXN1-215ENST00000533476 RLBP1P12271 317 aa24.79■■□□□ 1.56
UBXN1-215ENST00000533476 NPM2Q86SE8 214 aaKnown RBP24.79■■□□□ 1.56
UBXN1-215ENST00000533476 KDM4FA0A1W2PPD8 638 aa24.78■■□□□ 1.56
UBXN1-215ENST00000533476 LTKP29376 864 aa24.78■■□□□ 1.56
UBXN1-215ENST00000533476 ZNF692Q9BU19 519 aaPredicted RBP24.78■■□□□ 1.56
UBXN1-215ENST00000533476 ARHGAP23Q9P227 1491 aa24.78■■□□□ 1.56
UBXN1-215ENST00000533476 PPM1GO15355 546 aaPredicted RBP24.78■■□□□ 1.56
UBXN1-215ENST00000533476 FBLN1P23142 703 aa24.78■■□□□ 1.56
UBXN1-215ENST00000533476 EXOSC9Q06265 439 aaKnown RBP24.78■■□□□ 1.56
UBXN1-215ENST00000533476 NCKAP5LQ9HCH0 1330 aa24.77■■□□□ 1.56
UBXN1-215ENST00000533476 FER1L4A9Z1Z3 1794 aa24.77■■□□□ 1.56
UBXN1-215ENST00000533476 PRKAR2BP31323 418 aa24.77■■□□□ 1.56
UBXN1-215ENST00000533476 FAM161AQ3B820 660 aa24.77■■□□□ 1.56
UBXN1-215ENST00000533476 COG3Q96JB2 828 aa24.77■■□□□ 1.56
UBXN1-215ENST00000533476 EMILIN1Q9Y6C2 1016 aa24.77■■□□□ 1.56
UBXN1-215ENST00000533476 ZKSCAN2Q63HK3 967 aa24.76■■□□□ 1.55
UBXN1-215ENST00000533476 NEFMP07197 916 aa24.76■■□□□ 1.55
UBXN1-215ENST00000533476 TNNQ9UQP3 1299 aa24.76■■□□□ 1.55
UBXN1-215ENST00000533476 IL13P35225 146 aa24.75■■□□□ 1.55
UBXN1-215ENST00000533476 PMFBP1Q8TBY8 1022 aa24.74■■□□□ 1.55
UBXN1-215ENST00000533476 ZRANB1Q9UGI0 708 aa24.74■■□□□ 1.55
UBXN1-215ENST00000533476 RIMS1Q86UR5 1692 aaKnown RBP24.74■■□□□ 1.55
UBXN1-215ENST00000533476 ADAMTSL3P82987 1691 aa24.74■■□□□ 1.55
UBXN1-215ENST00000533476 CEBPAP49715 358 aaPredicted RBP24.74■■□□□ 1.55
UBXN1-215ENST00000533476 C8orf34Q49A92 452 aa24.74■■□□□ 1.55
UBXN1-215ENST00000533476 EID1Q9Y6B2 187 aa24.73■■□□□ 1.55
UBXN1-215ENST00000533476 PTPRUQ92729 1446 aa24.73■■□□□ 1.55
UBXN1-215ENST00000533476 RGS3P49796 1198 aa24.73■■□□□ 1.55
UBXN1-215ENST00000533476 MVPQ14764 893 aaKnown RBP24.73■■□□□ 1.55
UBXN1-215ENST00000533476 NFE2L2Q16236 605 aa24.73■■□□□ 1.55
UBXN1-215ENST00000533476 SMC4Q9NTJ3 1288 aa24.73■■□□□ 1.55
UBXN1-215ENST00000533476 DZIP1LQ8IYY4 767 aaKnown RBP24.71■■□□□ 1.55
UBXN1-215ENST00000533476 DIP2AQ14689 1571 aa24.71■■□□□ 1.55
UBXN1-215ENST00000533476 SSH1Q8WYL5 1049 aa24.71■■□□□ 1.55
UBXN1-215ENST00000533476 VIRMAQ69YN4 1812 aaKnown RBP24.71■■□□□ 1.55
UBXN1-215ENST00000533476 PLEKHG3A1L390 1219 aa24.7■■□□□ 1.54
UBXN1-215ENST00000533476 PTCH1Q13635 1447 aa24.69■■□□□ 1.54
UBXN1-215ENST00000533476 FTSJ3Q8IY81 847 aaKnown RBP24.69■■□□□ 1.54
UBXN1-215ENST00000533476 PCDHB15Q9Y5E8 787 aa24.69■■□□□ 1.54
UBXN1-215ENST00000533476 HMOX1P09601 288 aa24.69■■□□□ 1.54
UBXN1-215ENST00000533476 NALCNQ8IZF0 1738 aa24.68■■□□□ 1.54
UBXN1-215ENST00000533476 CALD1Q05682 793 aaKnown RBP24.68■■□□□ 1.54
UBXN1-215ENST00000533476 PHACTR3Q96KR7 559 aa24.68■■□□□ 1.54
UBXN1-215ENST00000533476 OVOS2A0A0J9YW53 1432 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms