RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	SOBP	A7XYQ1	873 aa		7.26	□□□□□ -1.25
LMO7-223	ENST00000533299	DXO	O77932	396 aa	Known RBP	7.26	□□□□□ -1.25
LMO7-223	ENST00000533299	PDE4D	Q08499	809 aa		7.26	□□□□□ -1.25
LMO7-223	ENST00000533299	PLA2G4E	Q3MJ16	856 aa		7.26	□□□□□ -1.25
LMO7-223	ENST00000533299	PURB	Q96QR8	312 aa	Known RBP	7.26	□□□□□ -1.25
LMO7-223	ENST00000533299	AMHR2	Q16671	573 aa		7.25	□□□□□ -1.25
LMO7-223	ENST00000533299		Q3C1V9	767 aa		7.25	□□□□□ -1.25
LMO7-223	ENST00000533299	BRPF1	P55201	1214 aa	Predicted RBP	7.24	□□□□□ -1.25
LMO7-223	ENST00000533299	TTLL12	Q14166	644 aa	Predicted RBP	7.24	□□□□□ -1.25
LMO7-223	ENST00000533299	RNF19B	Q6ZMZ0	732 aa		7.24	□□□□□ -1.25
LMO7-223	ENST00000533299	SLURP2	P0DP57	97 aa		7.24	□□□□□ -1.25
LMO7-223	ENST00000533299	EHBP1	Q8NDI1	1231 aa		7.24	□□□□□ -1.25
LMO7-223	ENST00000533299	PXYLP1	Q8TE99	480 aa		7.24	□□□□□ -1.25
LMO7-223	ENST00000533299	KRTAP9-9	Q9BYP9	154 aa		7.24	□□□□□ -1.25
LMO7-223	ENST00000533299	KRTAP9-4	Q9BYQ2	154 aa		7.24	□□□□□ -1.25
LMO7-223	ENST00000533299	KRTAP4-8	A0A0G2JLE6	195 aa		7.23	□□□□□ -1.25
LMO7-223	ENST00000533299	MAN1A2	O60476	641 aa		7.23	□□□□□ -1.25
LMO7-223	ENST00000533299	METTL3	Q86U44	580 aa	Known RBP	7.23	□□□□□ -1.25
LMO7-223	ENST00000533299	GPR161	Q8N6U8	529 aa	Known RBP	7.23	□□□□□ -1.25
LMO7-223	ENST00000533299	CLCN1	P35523	988 aa		7.22	□□□□□ -1.25
LMO7-223	ENST00000533299	GRIPAP1	Q4V328	841 aa		7.22	□□□□□ -1.25
LMO7-223	ENST00000533299	RDH13	Q8NBN7	331 aa		7.22	□□□□□ -1.25
LMO7-223	ENST00000533299	PROC	P04070	461 aa		7.21	□□□□□ -1.26
LMO7-223	ENST00000533299	GCGR	P47871	477 aa		7.21	□□□□□ -1.26
LMO7-223	ENST00000533299	FAM161A	Q3B820	660 aa		7.21	□□□□□ -1.26
LMO7-223	ENST00000533299	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.21	□□□□□ -1.26
LMO7-223	ENST00000533299	GALNT6	Q8NCL4	622 aa		7.2	□□□□□ -1.26
LMO7-223	ENST00000533299	GPCPD1	Q9NPB8	672 aa		7.2	□□□□□ -1.26
LMO7-223	ENST00000533299	CCDC24	Q8N4L8	307 aa		7.2	□□□□□ -1.26
LMO7-223	ENST00000533299	NANOS1	Q8WY41	292 aa	Known RBP	7.2	□□□□□ -1.26
LMO7-223	ENST00000533299	KDM4C	Q9H3R0	1056 aa		7.2	□□□□□ -1.26
LMO7-223	ENST00000533299	MDM2	Q00987	491 aa	Predicted RBP	7.19	□□□□□ -1.26
LMO7-223	ENST00000533299	MPND	Q8N594	471 aa		7.19	□□□□□ -1.26
LMO7-223	ENST00000533299	WHAMM	Q8TF30	809 aa		7.19	□□□□□ -1.26
LMO7-223	ENST00000533299	DCAF5	Q96JK2	942 aa		7.19	□□□□□ -1.26
LMO7-223	ENST00000533299	TMEM132A	Q24JP5	1023 aa		7.18	□□□□□ -1.26
LMO7-223	ENST00000533299	PARP9	Q8IXQ6	854 aa		7.18	□□□□□ -1.26
LMO7-223	ENST00000533299	PHF20L1	A8MW92	1017 aa		7.17	□□□□□ -1.26
LMO7-223	ENST00000533299	ITGB2	P05107	769 aa		7.17	□□□□□ -1.26
LMO7-223	ENST00000533299	DDRGK1	Q96HY6	314 aa		7.17	□□□□□ -1.26
LMO7-223	ENST00000533299	USB1	Q9BQ65	265 aa	Known RBP	7.17	□□□□□ -1.26
LMO7-223	ENST00000533299	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.17	□□□□□ -1.26
LMO7-223	ENST00000533299	PLEKHG3	A1L390	1219 aa		7.17	□□□□□ -1.26
LMO7-223	ENST00000533299	TIMP2	P16035	220 aa		7.17	□□□□□ -1.26
LMO7-223	ENST00000533299	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.17	□□□□□ -1.26
LMO7-223	ENST00000533299	ADH1C	P00326	375 aa		7.16	□□□□□ -1.26
LMO7-223	ENST00000533299	SULF1	Q8IWU6	871 aa		7.16	□□□□□ -1.26
LMO7-223	ENST00000533299	NNT	Q13423	1086 aa		7.15	□□□□□ -1.26
LMO7-223	ENST00000533299	PHOX2B	Q99453	314 aa		7.15	□□□□□ -1.26
LMO7-223	ENST00000533299	SSTR3	P32745	418 aa	Predicted RBP	7.14	□□□□□ -1.27
LMO7-223	ENST00000533299	WDR4	P57081	412 aa	Known RBP	7.13	□□□□□ -1.27
LMO7-223	ENST00000533299	RNFT1	Q5M7Z0	435 aa		7.13	□□□□□ -1.27
LMO7-223	ENST00000533299	FAM217B	Q9NTX9	383 aa	Predicted RBP	7.13	□□□□□ -1.27
LMO7-223	ENST00000533299	DDX11L8	A8MPP1	907 aa		7.12	□□□□□ -1.27
LMO7-223	ENST00000533299	IL27	Q8NEV9	243 aa		7.12	□□□□□ -1.27
LMO7-223	ENST00000533299	KLF16	Q9BXK1	252 aa	Predicted RBP	7.12	□□□□□ -1.27
LMO7-223	ENST00000533299	BAG6	P46379	1132 aa		7.11	□□□□□ -1.27
LMO7-223	ENST00000533299	MAP3K10	Q02779	954 aa		7.11	□□□□□ -1.27
LMO7-223	ENST00000533299	DIXDC1	Q155Q3	683 aa		7.11	□□□□□ -1.27
LMO7-223	ENST00000533299	NLRP7	Q8WX94	980 aa		7.11	□□□□□ -1.27
LMO7-223	ENST00000533299	RSPH6A	Q9H0K4	717 aa		7.11	□□□□□ -1.27
LMO7-223	ENST00000533299	ENAM	Q9NRM1	1142 aa		7.11	□□□□□ -1.27
LMO7-223	ENST00000533299	FAM117A	Q9C073	453 aa		7.1	□□□□□ -1.27
LMO7-223	ENST00000533299	SOS2	Q07890	1332 aa	Predicted RBP	7.09	□□□□□ -1.27
LMO7-223	ENST00000533299	MS4A1	P11836	297 aa		7.09	□□□□□ -1.27
LMO7-223	ENST00000533299	SH3BP2	P78314	561 aa		7.09	□□□□□ -1.27
LMO7-223	ENST00000533299	BEGAIN	Q9BUH8	593 aa		7.09	□□□□□ -1.27
LMO7-223	ENST00000533299	UPP2	O95045	317 aa		7.08	□□□□□ -1.28
LMO7-223	ENST00000533299	JUND	P17535	347 aa		7.08	□□□□□ -1.28
LMO7-223	ENST00000533299	C6orf118	Q5T5N4	469 aa		7.08	□□□□□ -1.28
LMO7-223	ENST00000533299	BEND7	Q8N7W2	519 aa	Predicted RBP	7.08	□□□□□ -1.28
LMO7-223	ENST00000533299	VARS	P26640	1264 aa	Known RBP	7.07	□□□□□ -1.28
LMO7-223	ENST00000533299	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.07	□□□□□ -1.28
LMO7-223	ENST00000533299	LYPD4	Q6UWN0	246 aa		7.07	□□□□□ -1.28
LMO7-223	ENST00000533299	NUTM1	Q86Y26	1132 aa		7.07	□□□□□ -1.28
LMO7-223	ENST00000533299	DNMT3L	Q9UJW3	386 aa		7.07	□□□□□ -1.28
LMO7-223	ENST00000533299	TLL2	Q9Y6L7	1015 aa		7.07	□□□□□ -1.28
LMO7-223	ENST00000533299	CD46	P15529	392 aa		7.06	□□□□□ -1.28
LMO7-223	ENST00000533299	PTCRA	Q6ISU1	281 aa	Predicted RBP	7.06	□□□□□ -1.28
LMO7-223	ENST00000533299	GOPC	Q9HD26	462 aa		7.06	□□□□□ -1.28
LMO7-223	ENST00000533299	BMP2	P12643	396 aa		7.05	□□□□□ -1.28
LMO7-223	ENST00000533299	ATP1B4	Q9UN42	357 aa	Predicted RBP	7.05	□□□□□ -1.28
LMO7-223	ENST00000533299	ADAMTS2	O95450	1211 aa		7.04	□□□□□ -1.28
LMO7-223	ENST00000533299	CELA2B	P08218	269 aa	Predicted RBP	7.04	□□□□□ -1.28
LMO7-223	ENST00000533299	PODN	Q7Z5L7	613 aa		7.04	□□□□□ -1.28
LMO7-223	ENST00000533299	PTS	Q03393	145 aa		7.04	□□□□□ -1.28
LMO7-223	ENST00000533299	SV2A	Q7L0J3	742 aa		7.04	□□□□□ -1.28
LMO7-223	ENST00000533299	NUDT12	Q9BQG2	462 aa		7.04	□□□□□ -1.28
LMO7-223	ENST00000533299	CNTNAP5	Q8WYK1	1306 aa		7.03	□□□□□ -1.28
LMO7-223	ENST00000533299	ZIC2	O95409	532 aa	Predicted RBP	7.03	□□□□□ -1.28
LMO7-223	ENST00000533299	USP46	P62068	366 aa		7.03	□□□□□ -1.28
LMO7-223	ENST00000533299	SRSF11	Q05519	484 aa	Known RBP	7.03	□□□□□ -1.28
LMO7-223	ENST00000533299	SH3D19	Q5HYK7	790 aa		7.03	□□□□□ -1.28
LMO7-223	ENST00000533299	LINC00528	Q8N1L1	170 aa		7.03	□□□□□ -1.28
LMO7-223	ENST00000533299	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.03	□□□□□ -1.28
LMO7-223	ENST00000533299	KDM4A	O75164	1064 aa		7.01	□□□□□ -1.29
LMO7-223	ENST00000533299	FURIN	P09958	794 aa		7.01	□□□□□ -1.29
LMO7-223	ENST00000533299	SKIV2L	Q15477	1246 aa	Known RBP	7.01	□□□□□ -1.29
LMO7-223	ENST00000533299	KRTAP19-1	Q8IUB9	90 aa		7.01	□□□□□ -1.29
LMO7-223	ENST00000533299	CCDC155	Q8N6L0	562 aa		7.01	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms